| Definition | Dehalococcoides ethenogenes 195, complete genome. |
|---|---|
| Accession | NC_002936 |
| Length | 1,469,720 |
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The map label for this gene is 57234658
Identifier: 57234658
GI number: 57234658
Start: 502495
End: 503046
Strand: Direct
Name: 57234658
Synonym: DET0547
Alternate gene names: NA
Gene position: 502495-503046 (Clockwise)
Preceding gene: 57234659
Following gene: 57234657
Centisome position: 34.19
GC content: 47.83
Gene sequence:
>552_bases ATGGACAGGCAGCTTGCTTTAGCTGAAGTAGAAAAACGGATAGAAAATAAAAATCTGGTCAAACATATGCTGGCGGTTGA GGCCGTCATGAAAAGTTTGGCTGCATATTTCGGTGAAAACGAAGATGAATGGGCTTTGGCCGGGCTTATACATGATATAG ACCTGGGTGAAGTAAAAGACGATATGTCGCTTCACAGCAAACGCGGTGCCGAAATTGCCGCCGGTTTGGGTGCCAGTGAA GATGTCTGCCGGGCAATTCTGGTGCATAATTCGGCTCATGGCATCCTTCCTGAAAGCCGTATGGAAAAAGCTTTGTTCTG CTCTGACCCTATAACCGGCCTTATTACAGCCGCTGCGTTAGTCAGGCCGGATAAAAAGCTGGCCTGTGTGGAAGCTAAAA GTGTATCCAAACGCTTTAAGGAAAAGTCTTTTGCCGCCGGTGCAAACCGGGAACAGATAGCCGCCTGTTCCGATTTGGGT TTGGAACTGGATGAGTTTATCCGTATTTCTCTGGGTGCTATGCAAGCTGTTGCCTCTGATTTGGGGCTTTAA
Upstream 100 bases:
>100_bases TGCGGCGGGTTTTGCCGAAACTTAAACCGGCTTAATAAATTACGGTCTGCTGTCAGGCGCAGTGGCAAATTTGTGAAGAC TAATCAGCGGAGAGATAAAT
Downstream 100 bases:
>100_bases ATATTTTCAGCAAACACTTTAACCCTTTGCATTTTGTCCCGCATACGTAATATAATTCTAACATAAATACTTTATGCTAA CGGACAGAAAGAGCAAGGGG
Product: HDIG domain-containing protein
Products: NA
Alternate protein names: Metal Dependent Phophohydrolase; HDIG Domain-Containing Protein; HDIG Domain Protein; Hydrolase; Hdig Domain Protein; HD Superfamily Hydrolase; HDIG-Domain-Containing Protein; Hydrolase Family Protein; Domain HDIG Protein; Phosphohydrolase; HAD-Superfamily Hydrolase; Metal-Dependent Phosphoesterase; HD Domain Protein; Lysyl-TRNA Synthetase
Number of amino acids: Translated: 183; Mature: 183
Protein sequence:
>183_residues MDRQLALAEVEKRIENKNLVKHMLAVEAVMKSLAAYFGENEDEWALAGLIHDIDLGEVKDDMSLHSKRGAEIAAGLGASE DVCRAILVHNSAHGILPESRMEKALFCSDPITGLITAAALVRPDKKLACVEAKSVSKRFKEKSFAAGANREQIAACSDLG LELDEFIRISLGAMQAVASDLGL
Sequences:
>Translated_183_residues MDRQLALAEVEKRIENKNLVKHMLAVEAVMKSLAAYFGENEDEWALAGLIHDIDLGEVKDDMSLHSKRGAEIAAGLGASE DVCRAILVHNSAHGILPESRMEKALFCSDPITGLITAAALVRPDKKLACVEAKSVSKRFKEKSFAAGANREQIAACSDLG LELDEFIRISLGAMQAVASDLGL >Mature_183_residues MDRQLALAEVEKRIENKNLVKHMLAVEAVMKSLAAYFGENEDEWALAGLIHDIDLGEVKDDMSLHSKRGAEIAAGLGASE DVCRAILVHNSAHGILPESRMEKALFCSDPITGLITAAALVRPDKKLACVEAKSVSKRFKEKSFAAGANREQIAACSDLG LELDEFIRISLGAMQAVASDLGL
Specific function: Unknown
COG id: COG2316
COG function: function code R; Predicted hydrolase (HD superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19717; Mature: 19717
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRQLALAEVEKRIENKNLVKHMLAVEAVMKSLAAYFGENEDEWALAGLIHDIDLGEVKD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHH DMSLHSKRGAEIAAGLGASEDVCRAILVHNSAHGILPESRMEKALFCSDPITGLITAAAL HHHHHHHCCCHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHH VRPDKKLACVEAKSVSKRFKEKSFAAGANREQIAACSDLGLELDEFIRISLGAMQAVASD HCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH LGL HCC >Mature Secondary Structure MDRQLALAEVEKRIENKNLVKHMLAVEAVMKSLAAYFGENEDEWALAGLIHDIDLGEVKD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHH DMSLHSKRGAEIAAGLGASEDVCRAILVHNSAHGILPESRMEKALFCSDPITGLITAAAL HHHHHHHCCCHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHH VRPDKKLACVEAKSVSKRFKEKSFAAGANREQIAACSDLGLELDEFIRISLGAMQAVASD HCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH LGL HCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA