| Definition | Dehalococcoides ethenogenes 195, complete genome. |
|---|---|
| Accession | NC_002936 |
| Length | 1,469,720 |
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The map label for this gene is 57234605
Identifier: 57234605
GI number: 57234605
Start: 547300
End: 548628
Strand: Direct
Name: 57234605
Synonym: DET0597
Alternate gene names: NA
Gene position: 547300-548628 (Clockwise)
Preceding gene: 57234638
Following gene: 57234592
Centisome position: 37.24
GC content: 48.46
Gene sequence:
>1329_bases ATGGCTGAAGTTCGGGCTTTTCACGGATTACGTTACAACCCTATGTTTGTAGATGATATGGCAGATGTTATCTGTCCGCC TTATGACATTATCAGCCCTGAACAGGAAAAAGCCCTTAAAGAGCGCAGCCCTTACAACTATATACGGCTGGAATACAGCC AGCCCACCCCCCAGGACAATATTGTAGATAACCGCTATACCCGTGCCGCCGCCATCTTGGAAAAATGGATTGGCGAACGG GTAATGACTGCCGAAAAGAAAGCGGCTATATACATACATGACCATTACTTCAGTGTGTTCGGCAAACAGTATAAAAGGCG GGGCATTATTGCCAGAGTGCGACTTGAGGAATGGGACAGGATGGTTATCCGCCCCCACGAAGGCACACTTTCCGAACCTA AAAGGGACAGGATTAACCTCATTTCAGCCGTCCGTGCCAATACCAGCCCGGTGTACGGGCTGTATCAGGATATAGAAAAA AACGTAAGCAGGCTGCTTGAGCTGCAAACCGAAAGCAAACCGGTTGTCAGCATGAATATTGAAGGCGAACGCCATGAGCT TTGGGTGGTAACTGATGAACCAGCCATATCCAAAATAACGGCTTTATTTGACAAGAAACCCATCTATATAGCTGACGGCC ATCATCGTTATGAAAGCGCCCTGACCTACAGGCGGGAACGTCTGGCCGGAAACCCCCAGCTCCCCTCTGATGACCCGGTT AATTTTGTAATGATGACCCTGGTAGACTTTGCTGACCCCGGTCTGGTAGTTTTGCCGGCGCACCGCCTGCTGGGCGGGAT GGACGCAAGTACTTTGTCAAATCTACAGACCAAACTGGCATCGTTCTTTGATGTTACTACCATACCGGCCAAACTGCCTG GTGCTTGGGATACTCTGGATAAAGCCCTGAAAGAAGAGGGTAAAATCCGCCTGGTTATGTATGGTTTGGGCGGCACAGAA AACTTCACGTTGCTGACCCTGCGTGAGATTGAGACTGCCAGTAACCTTATGCCGTATTTCCATTCTGATATCTATAAGAA GCTGGATGTGAGCGTACTTGACCATATTATCCTTGAGGAGCTGATGGGGCTTAAAACGGTGGAAGACCCGCGCATAGCCT TTAATTTTGACCGTAATGATGTGGTTTCGCGGGTGAAATCAGGTGAATTCCAGTTGGCCTTTATTCTGAACCCCATGAAG GCGGAGGTTATCAAGGCTATTTCAGACGTATCTGACCGCATGCCCCGCAAATCCACTTATTTCTTCCCCAAACTGCCTTC GGGTTTGGTAGTTTACCGTTTTGACTCTGAGGCAAATTCCAAAAAGTAA
Upstream 100 bases:
>100_bases CAAGTACAAAAGTACAACCGTTCACGTTTGAAAGGGGCTTGCGTCAGACGCCGTTCTAAGTTAAACTAAAACCAGATTTT GGAAAGAGGGAGCTAGAAAA
Downstream 100 bases:
>100_bases ATCACATAGGTTTATAAAACAAAGAAGGGGAGGTTTTCACCTCCCCTTTATGATTTTACCTAAATATTTTAATCAGGGTT TGTAATCTTTGGCCATCTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 442; Mature: 441
Protein sequence:
>442_residues MAEVRAFHGLRYNPMFVDDMADVICPPYDIISPEQEKALKERSPYNYIRLEYSQPTPQDNIVDNRYTRAAAILEKWIGER VMTAEKKAAIYIHDHYFSVFGKQYKRRGIIARVRLEEWDRMVIRPHEGTLSEPKRDRINLISAVRANTSPVYGLYQDIEK NVSRLLELQTESKPVVSMNIEGERHELWVVTDEPAISKITALFDKKPIYIADGHHRYESALTYRRERLAGNPQLPSDDPV NFVMMTLVDFADPGLVVLPAHRLLGGMDASTLSNLQTKLASFFDVTTIPAKLPGAWDTLDKALKEEGKIRLVMYGLGGTE NFTLLTLREIETASNLMPYFHSDIYKKLDVSVLDHIILEELMGLKTVEDPRIAFNFDRNDVVSRVKSGEFQLAFILNPMK AEVIKAISDVSDRMPRKSTYFFPKLPSGLVVYRFDSEANSKK
Sequences:
>Translated_442_residues MAEVRAFHGLRYNPMFVDDMADVICPPYDIISPEQEKALKERSPYNYIRLEYSQPTPQDNIVDNRYTRAAAILEKWIGER VMTAEKKAAIYIHDHYFSVFGKQYKRRGIIARVRLEEWDRMVIRPHEGTLSEPKRDRINLISAVRANTSPVYGLYQDIEK NVSRLLELQTESKPVVSMNIEGERHELWVVTDEPAISKITALFDKKPIYIADGHHRYESALTYRRERLAGNPQLPSDDPV NFVMMTLVDFADPGLVVLPAHRLLGGMDASTLSNLQTKLASFFDVTTIPAKLPGAWDTLDKALKEEGKIRLVMYGLGGTE NFTLLTLREIETASNLMPYFHSDIYKKLDVSVLDHIILEELMGLKTVEDPRIAFNFDRNDVVSRVKSGEFQLAFILNPMK AEVIKAISDVSDRMPRKSTYFFPKLPSGLVVYRFDSEANSKK >Mature_441_residues AEVRAFHGLRYNPMFVDDMADVICPPYDIISPEQEKALKERSPYNYIRLEYSQPTPQDNIVDNRYTRAAAILEKWIGERV MTAEKKAAIYIHDHYFSVFGKQYKRRGIIARVRLEEWDRMVIRPHEGTLSEPKRDRINLISAVRANTSPVYGLYQDIEKN VSRLLELQTESKPVVSMNIEGERHELWVVTDEPAISKITALFDKKPIYIADGHHRYESALTYRRERLAGNPQLPSDDPVN FVMMTLVDFADPGLVVLPAHRLLGGMDASTLSNLQTKLASFFDVTTIPAKLPGAWDTLDKALKEEGKIRLVMYGLGGTEN FTLLTLREIETASNLMPYFHSDIYKKLDVSVLDHIILEELMGLKTVEDPRIAFNFDRNDVVSRVKSGEFQLAFILNPMKA EVIKAISDVSDRMPRKSTYFFPKLPSGLVVYRFDSEANSKK
Specific function: Unknown
COG id: COG4198
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50596; Mature: 50465
Theoretical pI: Translated: 6.87; Mature: 6.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEVRAFHGLRYNPMFVDDMADVICPPYDIISPEQEKALKERSPYNYIRLEYSQPTPQDN CCCCCHHCCCCCCCEEHHHHHHHHCCCHHCCCCHHHHHHHHCCCCCEEEEEECCCCCCCC IVDNRYTRAAAILEKWIGERVMTAEKKAAIYIHDHYFSVFGKQYKRRGIIARVRLEEWDR CCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHCCCEEEEECCCCCC MVIRPHEGTLSEPKRDRINLISAVRANTSPVYGLYQDIEKNVSRLLELQTESKPVVSMNI EEEECCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE EGERHELWVVTDEPAISKITALFDKKPIYIADGHHRYESALTYRRERLAGNPQLPSDDPV CCCCEEEEEEECCCHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCH NFVMMTLVDFADPGLVVLPAHRLLGGMDASTLSNLQTKLASFFDVTTIPAKLPGAWDTLD HHHHHHHHHHCCCCEEEEECHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH KALKEEGKIRLVMYGLGGTENFTLLTLREIETASNLMPYFHSDIYKKLDVSVLDHIILEE HHHHCCCCEEEEEEECCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LMGLKTVEDPRIAFNFDRNDVVSRVKSGEFQLAFILNPMKAEVIKAISDVSDRMPRKSTY HHCCCCCCCCCEEEECCHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHCCCCCCE FFPKLPSGLVVYRFDSEANSKK ECCCCCCCEEEEEECCCCCCCC >Mature Secondary Structure AEVRAFHGLRYNPMFVDDMADVICPPYDIISPEQEKALKERSPYNYIRLEYSQPTPQDN CCCCHHCCCCCCCEEHHHHHHHHCCCHHCCCCHHHHHHHHCCCCCEEEEEECCCCCCCC IVDNRYTRAAAILEKWIGERVMTAEKKAAIYIHDHYFSVFGKQYKRRGIIARVRLEEWDR CCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHCCCEEEEECCCCCC MVIRPHEGTLSEPKRDRINLISAVRANTSPVYGLYQDIEKNVSRLLELQTESKPVVSMNI EEEECCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE EGERHELWVVTDEPAISKITALFDKKPIYIADGHHRYESALTYRRERLAGNPQLPSDDPV CCCCEEEEEEECCCHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCH NFVMMTLVDFADPGLVVLPAHRLLGGMDASTLSNLQTKLASFFDVTTIPAKLPGAWDTLD HHHHHHHHHHCCCCEEEEECHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH KALKEEGKIRLVMYGLGGTENFTLLTLREIETASNLMPYFHSDIYKKLDVSVLDHIILEE HHHHCCCCEEEEEEECCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LMGLKTVEDPRIAFNFDRNDVVSRVKSGEFQLAFILNPMKAEVIKAISDVSDRMPRKSTY HHCCCCCCCCCEEEECCHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHCCCCCCE FFPKLPSGLVVYRFDSEANSKK ECCCCCCCEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA