| Definition | Dehalococcoides ethenogenes 195, complete genome. |
|---|---|
| Accession | NC_002936 |
| Length | 1,469,720 |
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The map label for this gene is hflX [H]
Identifier: 57234501
GI number: 57234501
Start: 678172
End: 679314
Strand: Direct
Name: hflX [H]
Synonym: DET0737
Alternate gene names: 57234501
Gene position: 678172-679314 (Clockwise)
Preceding gene: 57234503
Following gene: 57234494
Centisome position: 46.14
GC content: 47.86
Gene sequence:
>1143_bases GTGGCGGTGGATACTGATAATAACGCAAACTGGGATATAGAGGATTCTTTAGATGAGTTAGCTCAGTTGGTGCTTACTGC CGGTGCAACAGTGGTAGGGCGTTTGACCCAGAAACTTCAGGCACCTGCCCGAAACTCATACCTGGGAAAAGGCAAACTGG ATGAACTGGTTGAATTGAAAAAAGAACTTGGCTATAACCTGGTCATTTTTGATGATGAACTTTCGCCTATTCAGCAGAGA TTACTGGAAGAAGCGCTAGGGGTTAAAGTCATTGACCGGGTAGCGCTCATCTTGGATATATTTGCTAAACATGCCCATAC CCGTGAGGGTCAGCTTCAGGTAGAGCTGGCTCAAATGCAGTATATATTGCCCCGGCTGGCCGGCCAATGGAGTCATCTTG AAAGACTTGGCGGCGGGATAGGCACCAGAGGCCCGGGTGAATCACAGCTTGAAACCGATAAACGTATTATCCGTACCAAG ATACGCAACCTTCAAGAACAGTTGGACGACGTAACAACTCACCGGGACTTATACCGGGAGAGAAGGCGTATGCGGGGCGT GCCGGTGGTTTCCCTGGTTGGTTATACAAATAGCGGTAAGAGCAGCCTGCTTAATGCGGTGGTCAAAGCTGATGTATTGG CTGAAAACAAACTTTTTGCCACGCTTGACCCGACTACCAGGAGAATGTATATAAACGGACTTGGTAATGTACTGCTGACA GATACAGTAGGGTTTATCCGGAAGTTACCCCCGGCTATTGTGAAGGCTTTTAGGGCTACGCTGGAAGAAATAAACCAGGC AGACCTGCTGGTGCACGTGGTTGACATAACAGCGAAAAATGCCTTTGAACAGTGCCAGACAGTGGAAAAAATACTTGGAG ATATGGGGGTAGCTGAAAAACCCCGCCTGACGGCTATGAATAAGATAGACCTGAAGCTGGATAACAGCCGCAAATGGACT GAAGATGAGGCTTTAAGCTTATTGAAGGCGGAATGCCCGGTGGCGGAAGATACAGTGCTTATTTCAGCTGCGAAGCACTG GGGCTTAGCTGAATTTAACCTCAGGCTGAAAGAAAAATTGATTGGCATGGGGTTTAATCCCGGATACGCGGTTTATGATG AAGATGTCGGCGGAAAGAAATAA
Upstream 100 bases:
>100_bases ATATAATAGATAAATATGTATTTACTTTACATAACTGGAGGCTATTATTAATAAGGCATCTATAAATAGCGTAATAATTC AGCCGGAAAAAGCTGTTCTG
Downstream 100 bases:
>100_bases CGGTGATAAATGGAAAAAGAACTGGCTGATAGTATGATGTCCTGTCTGGATGAATTATCAAAGGTGCTTAGCCGCCGGAG AGAATTATTGTCCAAAAAGG
Product: GTP-binding protein, putative
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 380; Mature: 379
Protein sequence:
>380_residues MAVDTDNNANWDIEDSLDELAQLVLTAGATVVGRLTQKLQAPARNSYLGKGKLDELVELKKELGYNLVIFDDELSPIQQR LLEEALGVKVIDRVALILDIFAKHAHTREGQLQVELAQMQYILPRLAGQWSHLERLGGGIGTRGPGESQLETDKRIIRTK IRNLQEQLDDVTTHRDLYRERRRMRGVPVVSLVGYTNSGKSSLLNAVVKADVLAENKLFATLDPTTRRMYINGLGNVLLT DTVGFIRKLPPAIVKAFRATLEEINQADLLVHVVDITAKNAFEQCQTVEKILGDMGVAEKPRLTAMNKIDLKLDNSRKWT EDEALSLLKAECPVAEDTVLISAAKHWGLAEFNLRLKEKLIGMGFNPGYAVYDEDVGGKK
Sequences:
>Translated_380_residues MAVDTDNNANWDIEDSLDELAQLVLTAGATVVGRLTQKLQAPARNSYLGKGKLDELVELKKELGYNLVIFDDELSPIQQR LLEEALGVKVIDRVALILDIFAKHAHTREGQLQVELAQMQYILPRLAGQWSHLERLGGGIGTRGPGESQLETDKRIIRTK IRNLQEQLDDVTTHRDLYRERRRMRGVPVVSLVGYTNSGKSSLLNAVVKADVLAENKLFATLDPTTRRMYINGLGNVLLT DTVGFIRKLPPAIVKAFRATLEEINQADLLVHVVDITAKNAFEQCQTVEKILGDMGVAEKPRLTAMNKIDLKLDNSRKWT EDEALSLLKAECPVAEDTVLISAAKHWGLAEFNLRLKEKLIGMGFNPGYAVYDEDVGGKK >Mature_379_residues AVDTDNNANWDIEDSLDELAQLVLTAGATVVGRLTQKLQAPARNSYLGKGKLDELVELKKELGYNLVIFDDELSPIQQRL LEEALGVKVIDRVALILDIFAKHAHTREGQLQVELAQMQYILPRLAGQWSHLERLGGGIGTRGPGESQLETDKRIIRTKI RNLQEQLDDVTTHRDLYRERRRMRGVPVVSLVGYTNSGKSSLLNAVVKADVLAENKLFATLDPTTRRMYINGLGNVLLTD TVGFIRKLPPAIVKAFRATLEEINQADLLVHVVDITAKNAFEQCQTVEKILGDMGVAEKPRLTAMNKIDLKLDNSRKWTE DEALSLLKAECPVAEDTVLISAAKHWGLAEFNLRLKEKLIGMGFNPGYAVYDEDVGGKK
Specific function: Unknown
COG id: COG2262
COG function: function code R; GTPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
Organism=Homo sapiens, GI310133116, Length=231, Percent_Identity=32.4675324675325, Blast_Score=113, Evalue=3e-25, Organism=Homo sapiens, GI310124269, Length=215, Percent_Identity=32.5581395348837, Blast_Score=112, Evalue=7e-25, Organism=Homo sapiens, GI310124267, Length=215, Percent_Identity=32.5581395348837, Blast_Score=112, Evalue=7e-25, Organism=Homo sapiens, GI310124171, Length=215, Percent_Identity=32.5581395348837, Blast_Score=112, Evalue=7e-25, Organism=Homo sapiens, GI310124169, Length=215, Percent_Identity=32.5581395348837, Blast_Score=112, Evalue=7e-25, Organism=Homo sapiens, GI310133118, Length=231, Percent_Identity=32.4675324675325, Blast_Score=112, Evalue=7e-25, Organism=Escherichia coli, GI1790615, Length=312, Percent_Identity=47.4358974358974, Blast_Score=274, Evalue=7e-75, Organism=Caenorhabditis elegans, GI17561038, Length=292, Percent_Identity=28.7671232876712, Blast_Score=115, Evalue=5e-26, Organism=Drosophila melanogaster, GI24650079, Length=324, Percent_Identity=34.2592592592593, Blast_Score=133, Evalue=2e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR016496 - InterPro: IPR006073 - InterPro: IPR002917 [H]
Pfam domain/function: PF01926 MMR_HSR1 [H]
EC number: NA
Molecular weight: Translated: 42316; Mature: 42185
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: PS00327 BACTERIAL_OPSIN_RET
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVDTDNNANWDIEDSLDELAQLVLTAGATVVGRLTQKLQAPARNSYLGKGKLDELVELK CCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH KELGYNLVIFDDELSPIQQRLLEEALGVKVIDRVALILDIFAKHAHTREGQLQVELAQMQ HHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHH YILPRLAGQWSHLERLGGGIGTRGPGESQLETDKRIIRTKIRNLQEQLDDVTTHRDLYRE HHHHHHCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRRMRGVPVVSLVGYTNSGKSSLLNAVVKADVLAENKLFATLDPTTRRMYINGLGNVLLT HHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEECCCHHEEEHHCCCCCHHH DTVGFIRKLPPAIVKAFRATLEEINQADLLVHVVDITAKNAFEQCQTVEKILGDMGVAEK HHHHHHHHCCHHHHHHHHHHHHHCCHHHHEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCC PRLTAMNKIDLKLDNSRKWTEDEALSLLKAECPVAEDTVLISAAKHWGLAEFNLRLKEKL CCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCEEEEHHHHCCCHHHHHHHHHHH IGMGFNPGYAVYDEDVGGKK HCCCCCCCCEEEECCCCCCC >Mature Secondary Structure AVDTDNNANWDIEDSLDELAQLVLTAGATVVGRLTQKLQAPARNSYLGKGKLDELVELK CCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH KELGYNLVIFDDELSPIQQRLLEEALGVKVIDRVALILDIFAKHAHTREGQLQVELAQMQ HHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHH YILPRLAGQWSHLERLGGGIGTRGPGESQLETDKRIIRTKIRNLQEQLDDVTTHRDLYRE HHHHHHCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRRMRGVPVVSLVGYTNSGKSSLLNAVVKADVLAENKLFATLDPTTRRMYINGLGNVLLT HHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEECCCHHEEEHHCCCCCHHH DTVGFIRKLPPAIVKAFRATLEEINQADLLVHVVDITAKNAFEQCQTVEKILGDMGVAEK HHHHHHHHCCHHHHHHHHHHHHHCCHHHHEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCC PRLTAMNKIDLKLDNSRKWTEDEALSLLKAECPVAEDTVLISAAKHWGLAEFNLRLKEKL CCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCEEEEHHHHCCCHHHHHHHHHHH IGMGFNPGYAVYDEDVGGKK HCCCCCCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8248183; 7610040; 9278503; 2020545; 3040675 [H]