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The map label for this gene is ybbK [C]

Identifier: 57234389

GI number: 57234389

Start: 777414

End: 778217

Strand: Direct

Name: ybbK [C]

Synonym: DET0848

Alternate gene names: 57234389

Gene position: 777414-778217 (Clockwise)

Preceding gene: 57234390

Following gene: 57234379

Centisome position: 52.9

GC content: 50.12

Gene sequence:

>804_bases
ATGGAGGAAACCCTGAACACTTTAATAACGGTCGGGGTGGTTCTGGTTATACTGCTGCTGATACTCAGTATGGCCGTCAA
GGTAGTTGCCGAATACGAACGGGGTGTCATATTCCGGCTGGGGCGGCTTATCGGCGGCAAAGGGCCGGGTTTATTTTTCC
TTATCCCCTTTGTAGACCGTATGGTAAAGGTTGACCTGCGGGTAGTCACTATGGATGTACCCGGACAGGAAGTCATTACC
CGTGATAATGTCACCGTAAGGGTTAACGCCGTGGTTTATTTCAGAGTGGTAGACCCTGAAGCCTCGGTGGTGAAAGTGGT
TGACCATTACCGGGCTACTTCCCAGATTTCCCAGACTACCCTCAGGAATGTACTTGGCCAGTCAGAGCTTGACGAACTGC
TCTCCCAGCGTGAAAAACTGAACCAGATACTTCAGCAGATTATAGATGAAGCCACTGCCCCGTGGGGTGTCAAGGTCAGC
ATTGTAGAAATAAAAGAAGTGGAACTGCCCGAAGCTATGAAACGGTCTATGGCTGCTCAGGCTGAAGCCGAGCGGGTACG
CCGCGCCAAGATTATTCATGCCGAAGGTGAAATGCAGGCTTCCCAGAAACTGGCTCAGGCCGGCAAGGTTATTGCCAAAG
AGCCGGTCAGCCTCCAGCTGCGTTACCTGCAAACCATGACCGAAATTGCTTCAGAACACTCTAACACTATAATTTTCCCT
GTGCCGGTAGACCTTATCAGCATGTTCATGGATAAGGGTAAAGGCATGATGAACCCCAAGACTGAAAAAGACACTAAAGA
ATAG

Upstream 100 bases:

>100_bases
GGCGCATATTGAAAACGGCTCTGCCGAAGTGGGACAGGAAGTAGTAATAGTACGTCTGGAAGGACTGAAATTGTACGTCA
AAATGGAAAGGAGTGAATAA

Downstream 100 bases:

>100_bases
CTTTTTACCGTCATGTAAATTAGAAGGCCTGCTTTTAGAGCAGGCCTTCTTTATATATTAGTGTATTAAATATCATTCCG
CATGCCGCAGGCTTACATCA

Product: SPFH domain-containing protein/band 7 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
MEETLNTLITVGVVLVILLLILSMAVKVVAEYERGVIFRLGRLIGGKGPGLFFLIPFVDRMVKVDLRVVTMDVPGQEVIT
RDNVTVRVNAVVYFRVVDPEASVVKVVDHYRATSQISQTTLRNVLGQSELDELLSQREKLNQILQQIIDEATAPWGVKVS
IVEIKEVELPEAMKRSMAAQAEAERVRRAKIIHAEGEMQASQKLAQAGKVIAKEPVSLQLRYLQTMTEIASEHSNTIIFP
VPVDLISMFMDKGKGMMNPKTEKDTKE

Sequences:

>Translated_267_residues
MEETLNTLITVGVVLVILLLILSMAVKVVAEYERGVIFRLGRLIGGKGPGLFFLIPFVDRMVKVDLRVVTMDVPGQEVIT
RDNVTVRVNAVVYFRVVDPEASVVKVVDHYRATSQISQTTLRNVLGQSELDELLSQREKLNQILQQIIDEATAPWGVKVS
IVEIKEVELPEAMKRSMAAQAEAERVRRAKIIHAEGEMQASQKLAQAGKVIAKEPVSLQLRYLQTMTEIASEHSNTIIFP
VPVDLISMFMDKGKGMMNPKTEKDTKE
>Mature_267_residues
MEETLNTLITVGVVLVILLLILSMAVKVVAEYERGVIFRLGRLIGGKGPGLFFLIPFVDRMVKVDLRVVTMDVPGQEVIT
RDNVTVRVNAVVYFRVVDPEASVVKVVDHYRATSQISQTTLRNVLGQSELDELLSQREKLNQILQQIIDEATAPWGVKVS
IVEIKEVELPEAMKRSMAAQAEAERVRRAKIIHAEGEMQASQKLAQAGKVIAKEPVSLQLRYLQTMTEIASEHSNTIIFP
VPVDLISMFMDKGKGMMNPKTEKDTKE

Specific function: Unknown

COG id: COG0330

COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the band 7/mec-2 family [H]

Homologues:

Organism=Homo sapiens, GI38016911, Length=225, Percent_Identity=50.6666666666667, Blast_Score=228, Evalue=4e-60,
Organism=Homo sapiens, GI21686995, Length=243, Percent_Identity=47.3251028806584, Blast_Score=224, Evalue=9e-59,
Organism=Homo sapiens, GI221316744, Length=243, Percent_Identity=47.3251028806584, Blast_Score=223, Evalue=1e-58,
Organism=Homo sapiens, GI7657615, Length=249, Percent_Identity=36.144578313253, Blast_Score=174, Evalue=1e-43,
Organism=Homo sapiens, GI7305503, Length=182, Percent_Identity=36.8131868131868, Blast_Score=124, Evalue=7e-29,
Organism=Homo sapiens, GI20149563, Length=156, Percent_Identity=34.6153846153846, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI38016907, Length=57, Percent_Identity=56.140350877193, Blast_Score=74, Evalue=2e-13,
Organism=Escherichia coli, GI1786697, Length=194, Percent_Identity=39.6907216494845, Blast_Score=149, Evalue=2e-37,
Organism=Caenorhabditis elegans, GI25153583, Length=248, Percent_Identity=52.0161290322581, Blast_Score=246, Evalue=1e-65,
Organism=Caenorhabditis elegans, GI71987612, Length=248, Percent_Identity=52.0161290322581, Blast_Score=246, Evalue=1e-65,
Organism=Caenorhabditis elegans, GI71987621, Length=248, Percent_Identity=52.0161290322581, Blast_Score=244, Evalue=3e-65,
Organism=Caenorhabditis elegans, GI17569499, Length=251, Percent_Identity=52.9880478087649, Blast_Score=242, Evalue=1e-64,
Organism=Caenorhabditis elegans, GI17569493, Length=251, Percent_Identity=49.003984063745, Blast_Score=237, Evalue=4e-63,
Organism=Caenorhabditis elegans, GI193209764, Length=242, Percent_Identity=50, Blast_Score=235, Evalue=2e-62,
Organism=Caenorhabditis elegans, GI193210507, Length=261, Percent_Identity=49.4252873563218, Blast_Score=233, Evalue=8e-62,
Organism=Caenorhabditis elegans, GI17570161, Length=261, Percent_Identity=49.4252873563218, Blast_Score=233, Evalue=9e-62,
Organism=Caenorhabditis elegans, GI17570459, Length=255, Percent_Identity=48.6274509803922, Blast_Score=229, Evalue=1e-60,
Organism=Caenorhabditis elegans, GI71989948, Length=234, Percent_Identity=52.991452991453, Blast_Score=227, Evalue=5e-60,
Organism=Caenorhabditis elegans, GI17569497, Length=249, Percent_Identity=43.7751004016064, Blast_Score=217, Evalue=6e-57,
Organism=Caenorhabditis elegans, GI32566490, Length=229, Percent_Identity=51.528384279476, Blast_Score=208, Evalue=2e-54,
Organism=Caenorhabditis elegans, GI71989955, Length=184, Percent_Identity=56.5217391304348, Blast_Score=181, Evalue=4e-46,
Organism=Caenorhabditis elegans, GI71989963, Length=125, Percent_Identity=56, Blast_Score=139, Evalue=2e-33,
Organism=Caenorhabditis elegans, GI32564147, Length=198, Percent_Identity=35.3535353535354, Blast_Score=123, Evalue=8e-29,
Organism=Caenorhabditis elegans, GI17542664, Length=166, Percent_Identity=27.1084337349398, Blast_Score=78, Evalue=4e-15,
Organism=Drosophila melanogaster, GI45556022, Length=251, Percent_Identity=50.597609561753, Blast_Score=246, Evalue=1e-65,
Organism=Drosophila melanogaster, GI18860517, Length=257, Percent_Identity=49.8054474708171, Blast_Score=243, Evalue=9e-65,
Organism=Drosophila melanogaster, GI24657857, Length=252, Percent_Identity=51.1904761904762, Blast_Score=234, Evalue=5e-62,
Organism=Drosophila melanogaster, GI281365664, Length=247, Percent_Identity=52.2267206477733, Blast_Score=233, Evalue=7e-62,
Organism=Drosophila melanogaster, GI62484448, Length=247, Percent_Identity=52.2267206477733, Blast_Score=233, Evalue=7e-62,
Organism=Drosophila melanogaster, GI62484274, Length=247, Percent_Identity=52.2267206477733, Blast_Score=233, Evalue=1e-61,
Organism=Drosophila melanogaster, GI21356845, Length=252, Percent_Identity=42.0634920634921, Blast_Score=213, Evalue=1e-55,
Organism=Drosophila melanogaster, GI28573263, Length=248, Percent_Identity=39.9193548387097, Blast_Score=205, Evalue=2e-53,
Organism=Drosophila melanogaster, GI281361633, Length=245, Percent_Identity=43.265306122449, Blast_Score=205, Evalue=3e-53,
Organism=Drosophila melanogaster, GI281361631, Length=245, Percent_Identity=43.265306122449, Blast_Score=205, Evalue=3e-53,
Organism=Drosophila melanogaster, GI281361635, Length=185, Percent_Identity=43.2432432432432, Blast_Score=158, Evalue=3e-39,
Organism=Drosophila melanogaster, GI45550506, Length=197, Percent_Identity=35.0253807106599, Blast_Score=125, Evalue=3e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001107
- InterPro:   IPR018080
- InterPro:   IPR001972 [H]

Pfam domain/function: PF01145 Band_7 [H]

EC number: NA

Molecular weight: Translated: 29810; Mature: 29810

Theoretical pI: Translated: 6.82; Mature: 6.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEETLNTLITVGVVLVILLLILSMAVKVVAEYERGVIFRLGRLIGGKGPGLFFLIPFVDR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCEEEHHHHHH
MVKVDLRVVTMDVPGQEVITRDNVTVRVNAVVYFRVVDPEASVVKVVDHYRATSQISQTT
HHHHCEEEEEEECCCCHHEECCCEEEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHH
LRNVLGQSELDELLSQREKLNQILQQIIDEATAPWGVKVSIVEIKEVELPEAMKRSMAAQ
HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCHHHHHHHHHHH
AEAERVRRAKIIHAEGEMQASQKLAQAGKVIAKEPVSLQLRYLQTMTEIASEHSNTIIFP
HHHHHHHHHHHEECCCHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEE
VPVDLISMFMDKGKGMMNPKTEKDTKE
CCHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MEETLNTLITVGVVLVILLLILSMAVKVVAEYERGVIFRLGRLIGGKGPGLFFLIPFVDR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCEEEHHHHHH
MVKVDLRVVTMDVPGQEVITRDNVTVRVNAVVYFRVVDPEASVVKVVDHYRATSQISQTT
HHHHCEEEEEEECCCCHHEECCCEEEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHH
LRNVLGQSELDELLSQREKLNQILQQIIDEATAPWGVKVSIVEIKEVELPEAMKRSMAAQ
HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCHHHHHHHHHHH
AEAERVRRAKIIHAEGEMQASQKLAQAGKVIAKEPVSLQLRYLQTMTEIASEHSNTIIFP
HHHHHHHHHHHEECCCHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEE
VPVDLISMFMDKGKGMMNPKTEKDTKE
CCHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]