| Definition | Dehalococcoides ethenogenes 195, complete genome. |
|---|---|
| Accession | NC_002936 |
| Length | 1,469,720 |
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The map label for this gene is 57234344
Identifier: 57234344
GI number: 57234344
Start: 824409
End: 826679
Strand: Direct
Name: 57234344
Synonym: DET0902
Alternate gene names: NA
Gene position: 824409-826679 (Clockwise)
Preceding gene: 57234345
Following gene: 57234343
Centisome position: 56.09
GC content: 48.39
Gene sequence:
>2271_bases ATGCTGCGGCGGTTAGTTAAATTTATATCTGTTATAGTCCTGCTGGCTGGCCTGATTATTCAGCCGGCTGCTTCGGTAAC AGCAGCTGACCAGCTGACCGTCCACTTCGAGCGTATCTACGAAAGCCCGGTCAGTGTGACCTTCCGTGTCACTATCACCA ATGAGGGTAAAGCCCTGCCCGACCTGCCGCTTGAAGTCCTATTTGACGGATTGAATGTCTCAGACCTATCTCGTCTTACT ATTACAGAGCTGACCATAAATGAATATCAGGTCAGTTACCCTACCCAGTTTGAAACTATTGAAGAGAGTTATACTGCTAC CGGTAAATTGGTACTCAGTATAGATGCCAGCGGCCAGACCCTATACCAGGATGTTTCACTTCCGGTTATGGATAAATCAG GTAACCTGGTTTCATCCGGAGGGGAAATTATCAAATCAGGTGCCTATGATAGGATAGATCAGAAAACAGGTACGGTGTAC TGGTTTACGGATATCCCGGTTGCCTGGCAAACCAGTACTATACAGGAGATTATCCCTATAGAATTGGCTGACTGGACAGC AAAATCCAAGTCTCTTAAGGACAATAAACTTAAGACCTCTATATCTTTACCTGAAAAGAGCCTGGAAAAGAACCCTAAAG GTGATACCGGCTGGGGCAGCGGTACCCGGGTATGGGACGTCACCTTATCTCTTCCCCTGCTGACTACTGATAGCGGATGG GGCAGTCAGGGACTGATGAAATGGGATTTAGCCGGCACAATCTACTATGATGATACTAACTCCAGCTGGTGGAATAATAA CTGGCTGTACCGCCGTTTTATCGCCCTGGATATGACCACAATCTCCGAAACTCTGACCAATTTCCCGGTGTATATCAAAC TGGATTCCACCAATTTTGATTTTAGCCGGGCACAGGATAATGGAGAGGATATCCGTTTTACAGATGGGGTGAGTAACCTG GATTATGAGATTGTCAGCTGGGATTCTGTATCTGAAACAGCTGAGATTTATGTCAAGAATCCTGTTCAGCTGGCCAATGT GGCTACTGATGGCATATATATGTACTACGGGAATAAGGCCGTCAGTGATGGACAGAATCCCGCCGGTGTCTGGTCAAACG GATATGTGGCTGTGTACCATATGTCTGATGCCAGCTCTACCCTAATAAATAGCTCCGTAGGCAGCCTGCCAGGTACTAAA TCCGGCGATATGGCCGCACAAACCGCCGGACTGCTGGGGTATGCCCAGTACTTTGACGGAATAAATGACCAGATAATCGT TGCCTATAATGCCATTCTGGATATTACCAGCGGCAGCGTAGAAGCGATTATCCTGCCTGACAGCGCCGGTACAGACGGCT ATATCTTTGCTAAGGGCAACCCTGCCCTGGGCTACTACTGCAATACCCGCTATATTGGCAGCATAAACCGGATAGAATGG GCGGGACCATCAGCTGTCCAGAGTAATAATGTTTTTACCGATACTGACTGGACATATATTTCGTTTACCTGCAATGGCCG GGCTATCAGCTTCTACCATAACGGCACTGCCGCCGGATCACAGACCCTGAGCTCTGACCCGGACACTAATACTGACGGGT TATATATTGGCAACCGGATGGGCGGCAGCAGCGGCAGCACCTATTTTGACGGTCTGATTGATGAACTGCGTATCTCGGGT GTTGTCCGCTCGGCTGCCTGGTTGGCTGCTACTAATTTAAACCTTATGTCTCCGGATACTTTCCTCATTTTCGGCACAGA AGAGGGAAAGCCGGCAGATCCGGCTAACCTCTCAGCTGATATCTCAGGAAATAATATTGAACTGACCTGGGTAAAAGGTG ACCTGTCCCTGTCTACGGTCATTGTACGGGGCAGTCTGCATTATCCGGAATCACCAGATGATGGCCTGGTAGTATATGAC GGCCCGGCTGAAAGCTTCACCGATACCGGTGCTGCCGGAGAACTAAGCACTCACTACTACAGAGCCTGGGGATATTCCGG CTGGGGATATTCGGACGGATACAGCCAGGACAGAACGGAGGGAATCATGATTGGAGTTATCATTACCCTGGGACTGATAG CTATTGCCTATATAAAGCGGGATATCATTATGACTATTATCGCCGGGATATCCCTGCTGCTCTTAGGCTACGGCATTATA GATCCGGATATTGGCGGAAATGCCATTATACAGGCTCTGCCTATTATCCTGATGAGTGTTTACATGATAATCCGGGCAGC CATCTACGCTACTAACAGAAGAGAGGTATGA
Upstream 100 bases:
>100_bases AAAATGACTGAACTTTACTGGTCGCGGGGTGAACGGCTGCCGTCTAATCCAATGTTATATGAGAGTGTAAAAGGATGGGC GGAGAGGGAACGGGCAATAG
Downstream 100 bases:
>100_bases TATGTCCATATTATATGATCCTTCAAATCCTGTAAGCGGGTCTTCCAGCCGGGCAAAACTGATTGAAAATGTCTCAGGCC GTGATGCAGTTATTATCAAA
Product: hypothetical protein
Products: NA
Alternate protein names: Transport; MotA/lQ/ExbB Proton Channel Family Protein; Transporter-Like Membrane Protein
Number of amino acids: Translated: 756; Mature: 756
Protein sequence:
>756_residues MLRRLVKFISVIVLLAGLIIQPAASVTAADQLTVHFERIYESPVSVTFRVTITNEGKALPDLPLEVLFDGLNVSDLSRLT ITELTINEYQVSYPTQFETIEESYTATGKLVLSIDASGQTLYQDVSLPVMDKSGNLVSSGGEIIKSGAYDRIDQKTGTVY WFTDIPVAWQTSTIQEIIPIELADWTAKSKSLKDNKLKTSISLPEKSLEKNPKGDTGWGSGTRVWDVTLSLPLLTTDSGW GSQGLMKWDLAGTIYYDDTNSSWWNNNWLYRRFIALDMTTISETLTNFPVYIKLDSTNFDFSRAQDNGEDIRFTDGVSNL DYEIVSWDSVSETAEIYVKNPVQLANVATDGIYMYYGNKAVSDGQNPAGVWSNGYVAVYHMSDASSTLINSSVGSLPGTK SGDMAAQTAGLLGYAQYFDGINDQIIVAYNAILDITSGSVEAIILPDSAGTDGYIFAKGNPALGYYCNTRYIGSINRIEW AGPSAVQSNNVFTDTDWTYISFTCNGRAISFYHNGTAAGSQTLSSDPDTNTDGLYIGNRMGGSSGSTYFDGLIDELRISG VVRSAAWLAATNLNLMSPDTFLIFGTEEGKPADPANLSADISGNNIELTWVKGDLSLSTVIVRGSLHYPESPDDGLVVYD GPAESFTDTGAAGELSTHYYRAWGYSGWGYSDGYSQDRTEGIMIGVIITLGLIAIAYIKRDIIMTIIAGISLLLLGYGII DPDIGGNAIIQALPIILMSVYMIIRAAIYATNRREV
Sequences:
>Translated_756_residues MLRRLVKFISVIVLLAGLIIQPAASVTAADQLTVHFERIYESPVSVTFRVTITNEGKALPDLPLEVLFDGLNVSDLSRLT ITELTINEYQVSYPTQFETIEESYTATGKLVLSIDASGQTLYQDVSLPVMDKSGNLVSSGGEIIKSGAYDRIDQKTGTVY WFTDIPVAWQTSTIQEIIPIELADWTAKSKSLKDNKLKTSISLPEKSLEKNPKGDTGWGSGTRVWDVTLSLPLLTTDSGW GSQGLMKWDLAGTIYYDDTNSSWWNNNWLYRRFIALDMTTISETLTNFPVYIKLDSTNFDFSRAQDNGEDIRFTDGVSNL DYEIVSWDSVSETAEIYVKNPVQLANVATDGIYMYYGNKAVSDGQNPAGVWSNGYVAVYHMSDASSTLINSSVGSLPGTK SGDMAAQTAGLLGYAQYFDGINDQIIVAYNAILDITSGSVEAIILPDSAGTDGYIFAKGNPALGYYCNTRYIGSINRIEW AGPSAVQSNNVFTDTDWTYISFTCNGRAISFYHNGTAAGSQTLSSDPDTNTDGLYIGNRMGGSSGSTYFDGLIDELRISG VVRSAAWLAATNLNLMSPDTFLIFGTEEGKPADPANLSADISGNNIELTWVKGDLSLSTVIVRGSLHYPESPDDGLVVYD GPAESFTDTGAAGELSTHYYRAWGYSGWGYSDGYSQDRTEGIMIGVIITLGLIAIAYIKRDIIMTIIAGISLLLLGYGII DPDIGGNAIIQALPIILMSVYMIIRAAIYATNRREV >Mature_756_residues MLRRLVKFISVIVLLAGLIIQPAASVTAADQLTVHFERIYESPVSVTFRVTITNEGKALPDLPLEVLFDGLNVSDLSRLT ITELTINEYQVSYPTQFETIEESYTATGKLVLSIDASGQTLYQDVSLPVMDKSGNLVSSGGEIIKSGAYDRIDQKTGTVY WFTDIPVAWQTSTIQEIIPIELADWTAKSKSLKDNKLKTSISLPEKSLEKNPKGDTGWGSGTRVWDVTLSLPLLTTDSGW GSQGLMKWDLAGTIYYDDTNSSWWNNNWLYRRFIALDMTTISETLTNFPVYIKLDSTNFDFSRAQDNGEDIRFTDGVSNL DYEIVSWDSVSETAEIYVKNPVQLANVATDGIYMYYGNKAVSDGQNPAGVWSNGYVAVYHMSDASSTLINSSVGSLPGTK SGDMAAQTAGLLGYAQYFDGINDQIIVAYNAILDITSGSVEAIILPDSAGTDGYIFAKGNPALGYYCNTRYIGSINRIEW AGPSAVQSNNVFTDTDWTYISFTCNGRAISFYHNGTAAGSQTLSSDPDTNTDGLYIGNRMGGSSGSTYFDGLIDELRISG VVRSAAWLAATNLNLMSPDTFLIFGTEEGKPADPANLSADISGNNIELTWVKGDLSLSTVIVRGSLHYPESPDDGLVVYD GPAESFTDTGAAGELSTHYYRAWGYSGWGYSDGYSQDRTEGIMIGVIITLGLIAIAYIKRDIIMTIIAGISLLLLGYGII DPDIGGNAIIQALPIILMSVYMIIRAAIYATNRREV
Specific function: Unknown
COG id: COG5306
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 82252; Mature: 82252
Theoretical pI: Translated: 4.17; Mature: 4.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRRLVKFISVIVLLAGLIIQPAASVTAADQLTVHFERIYESPVSVTFRVTITNEGKALP CHHHHHHHHHHHHHHHHHHHCCCCCCEECHHHEEEHHHHHCCCCEEEEEEEECCCCCCCC DLPLEVLFDGLNVSDLSRLTITELTINEYQVSYPTQFETIEESYTATGKLVLSIDASGQT CCCHHHHCCCCCCCCCCEEEEEEEEEEEEEEECCCHHHHHHHHCCCCCEEEEEEECCCCE LYQDVSLPVMDKSGNLVSSGGEIIKSGAYDRIDQKTGTVYWFTDIPVAWQTSTIQEIIPI EEEECCCEEECCCCCEECCCCHHHHCCCCHHCCCCCCEEEEEECCCCEEECCCHHHHCCE ELADWTAKSKSLKDNKLKTSISLPEKSLEKNPKGDTGWGSGTRVWDVTLSLPLLTTDSGW EEECCCCCCCCCCCCCEEEEECCCHHHHHCCCCCCCCCCCCCEEEEEEEEEEEEEECCCC GSQGLMKWDLAGTIYYDDTNSSWWNNNWLYRRFIALDMTTISETLTNFPVYIKLDSTNFD CCCCEEEEEEEEEEEEECCCCCCCCCCCEEEEEEEEEHHHHHHHHHCCCEEEEECCCCCC FSRAQDNGEDIRFTDGVSNLDYEIVSWDSVSETAEIYVKNPVQLANVATDGIYMYYGNKA CCCCCCCCCCEEEECCCCCCCEEEEECCCCCCCEEEEEECCEEEEEEEECCEEEEECCEE VSDGQNPAGVWSNGYVAVYHMSDASSTLINSSVGSLPGTKSGDMAAQTAGLLGYAQYFDG ECCCCCCCCCCCCCEEEEEEECCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC INDQIIVAYNAILDITSGSVEAIILPDSAGTDGYIFAKGNPALGYYCNTRYIGSINRIEW CCCCEEEEEEEEEEECCCCEEEEEECCCCCCCCEEEECCCCCEEEEECCEEECCCCEEEE AGPSAVQSNNVFTDTDWTYISFTCNGRAISFYHNGTAAGSQTLSSDPDTNTDGLYIGNRM CCCCCCCCCCCEECCCEEEEEEEECCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCC GGSSGSTYFDGLIDELRISGVVRSAAWLAATNLNLMSPDTFLIFGTEEGKPADPANLSAD CCCCCCHHHHHHHHHHHHHHHHHHHEEEEEECCEEECCCEEEEEECCCCCCCCCCCCEEE ISGNNIELTWVKGDLSLSTVIVRGSLHYPESPDDGLVVYDGPAESFTDTGAAGELSTHYY ECCCEEEEEEEECCCEEEEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEE RAWGYSGWGYSDGYSQDRTEGIMIGVIITLGLIAIAYIKRDIIMTIIAGISLLLLGYGII EEECCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DPDIGGNAIIQALPIILMSVYMIIRAAIYATNRREV CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MLRRLVKFISVIVLLAGLIIQPAASVTAADQLTVHFERIYESPVSVTFRVTITNEGKALP CHHHHHHHHHHHHHHHHHHHCCCCCCEECHHHEEEHHHHHCCCCEEEEEEEECCCCCCCC DLPLEVLFDGLNVSDLSRLTITELTINEYQVSYPTQFETIEESYTATGKLVLSIDASGQT CCCHHHHCCCCCCCCCCEEEEEEEEEEEEEEECCCHHHHHHHHCCCCCEEEEEEECCCCE LYQDVSLPVMDKSGNLVSSGGEIIKSGAYDRIDQKTGTVYWFTDIPVAWQTSTIQEIIPI EEEECCCEEECCCCCEECCCCHHHHCCCCHHCCCCCCEEEEEECCCCEEECCCHHHHCCE ELADWTAKSKSLKDNKLKTSISLPEKSLEKNPKGDTGWGSGTRVWDVTLSLPLLTTDSGW EEECCCCCCCCCCCCCEEEEECCCHHHHHCCCCCCCCCCCCCEEEEEEEEEEEEEECCCC GSQGLMKWDLAGTIYYDDTNSSWWNNNWLYRRFIALDMTTISETLTNFPVYIKLDSTNFD CCCCEEEEEEEEEEEEECCCCCCCCCCCEEEEEEEEEHHHHHHHHHCCCEEEEECCCCCC FSRAQDNGEDIRFTDGVSNLDYEIVSWDSVSETAEIYVKNPVQLANVATDGIYMYYGNKA CCCCCCCCCCEEEECCCCCCCEEEEECCCCCCCEEEEEECCEEEEEEEECCEEEEECCEE VSDGQNPAGVWSNGYVAVYHMSDASSTLINSSVGSLPGTKSGDMAAQTAGLLGYAQYFDG ECCCCCCCCCCCCCEEEEEEECCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC INDQIIVAYNAILDITSGSVEAIILPDSAGTDGYIFAKGNPALGYYCNTRYIGSINRIEW CCCCEEEEEEEEEEECCCCEEEEEECCCCCCCCEEEECCCCCEEEEECCEEECCCCEEEE AGPSAVQSNNVFTDTDWTYISFTCNGRAISFYHNGTAAGSQTLSSDPDTNTDGLYIGNRM CCCCCCCCCCCEECCCEEEEEEEECCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCC GGSSGSTYFDGLIDELRISGVVRSAAWLAATNLNLMSPDTFLIFGTEEGKPADPANLSAD CCCCCCHHHHHHHHHHHHHHHHHHHEEEEEECCEEECCCEEEEEECCCCCCCCCCCCEEE ISGNNIELTWVKGDLSLSTVIVRGSLHYPESPDDGLVVYDGPAESFTDTGAAGELSTHYY ECCCEEEEEEEECCCEEEEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEE RAWGYSGWGYSDGYSQDRTEGIMIGVIITLGLIAIAYIKRDIIMTIIAGISLLLLGYGII EEECCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DPDIGGNAIIQALPIILMSVYMIIRAAIYATNRREV CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA