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The map label for this gene is int [H]

Identifier: 57234334

GI number: 57234334

Start: 809291

End: 810598

Strand: Direct

Name: int [H]

Synonym: DET0883

Alternate gene names: 57234334

Gene position: 809291-810598 (Clockwise)

Preceding gene: 57234335

Following gene: 57234332

Centisome position: 55.06

GC content: 41.9

Gene sequence:

>1308_bases
ATGAAAGGCCATATCGTAAAACGCAGTACGGACAGCTGGTCAATTGTAATTGAACTGCCACGCGATCCAGCTACTGGTAA
ACGCAGACAATCTTGGCATACGATAAAAGGAACGAAAAAAGAAGCCGATAAAAAACTGCGTGAACTTCTTACTGCGCAAG
ATAACGGTATATTTGTAAAACAGAGTAAATTATCATTTGGCGAATGGCTTGAAAACTGGTGTAGAGATTACGTTAAGATC
CAAACTACCCAAAGAACATTTGAAAGTTACTATCAAAACATAATCGGGCATATTGAACCTGCACTAGGCAAGGTTATACT
GACTGAACTTACTCCCCAGATTATCCAAGCTTATTATGCAAGGCAATTAGAAAAAGGCCGTGCAGATGGTAAAGGTGGCC
TCTCTGCTCGAAGTGTGCTTTACCAGCATCGGATAATAAGTAAATGCCTTAAACAGGCAACCAAACTTGGCTTAATTATG
AGAAATCCAGCTGATGCAGTTGAACCACCCAGACCCCGAAAGACTGCAATATCTGTTCCAGATAAAGATGAATTACCCAG
ACTCCTAGATGCTTTTGAAACAACCCCCTATTACGTTTTTTATTGCCTGCTTCTTTATTGTGGCATGCGCCGAGGCGAAG
CTTTAGCATTACGCTGGAAGGATATAGATTTAAAACAAGACACAATTCAAATAGCCGAGACAGCTTTTACCTTAAGATCC
GGTGAATACGTCATAAAAGAACCCAAAACGCCTCACAGTCGAAGATGCATAGACATACCACCCACAATGAAGCTTCTTCT
GCTCGAATACAAAGCAGACCAGACGGCATATTATGCAAAACTAGGGGTAGAACTTGGCTTACATGACTTCGTCTTTACTC
GGCCTAATGGAGAGCCTTTAAATCCAAATACAGTTACTCACACTTTCCTGAAAGCAGTCCGAAAGGCAGGCTTTGATAAG
CTTCGTCTGCATGACCTGCGTCACTTACATGCTACGCTTATGCTTCAGGCAGGTATACACCCTAAGATTGTTTCCGAAAG
GCTTGGGCATGCCAGTATCAATATTACTTTAGATACATATAGCCATGTAATGCCTGGGCTTCAGAAAAAGGCTGTAAATG
TTTTTGATAAGATGCTGTCAGCTAACGAAGAATCGCTTGAAGAAAATTCGGTTAGCAAACGGTTAGCAAAACACGAGGGA
GTAAGTGGTAGGCCGTACAGGTCTCGAACCTGTGACCCTCTGATTAAAAGTCAAAAGCTAAAAAACCAGGCGGAGCCACT
CTCCTTTGCATTATGTTATGTATATTAG

Upstream 100 bases:

>100_bases
ATGAACTGGTTAGACAAGGCGCTATCCCTTCTATAAAATTAGGTAAGCGCATACTGATTTCCCGCATGCAATTAGAAGAA
ATTCTAAAACGGGGTAACGA

Downstream 100 bases:

>100_bases
AATCTTTTGATAGAAGCAATAACTCTTCCCAATATATCAGCGTTAGTCATAACTAAATCTTTATAATCTCCATTTGAGGA
CCGCAGAATAATCTGTCCAT

Product: phage integrase family site specific recombinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 435; Mature: 435

Protein sequence:

>435_residues
MKGHIVKRSTDSWSIVIELPRDPATGKRRQSWHTIKGTKKEADKKLRELLTAQDNGIFVKQSKLSFGEWLENWCRDYVKI
QTTQRTFESYYQNIIGHIEPALGKVILTELTPQIIQAYYARQLEKGRADGKGGLSARSVLYQHRIISKCLKQATKLGLIM
RNPADAVEPPRPRKTAISVPDKDELPRLLDAFETTPYYVFYCLLLYCGMRRGEALALRWKDIDLKQDTIQIAETAFTLRS
GEYVIKEPKTPHSRRCIDIPPTMKLLLLEYKADQTAYYAKLGVELGLHDFVFTRPNGEPLNPNTVTHTFLKAVRKAGFDK
LRLHDLRHLHATLMLQAGIHPKIVSERLGHASINITLDTYSHVMPGLQKKAVNVFDKMLSANEESLEENSVSKRLAKHEG
VSGRPYRSRTCDPLIKSQKLKNQAEPLSFALCYVY

Sequences:

>Translated_435_residues
MKGHIVKRSTDSWSIVIELPRDPATGKRRQSWHTIKGTKKEADKKLRELLTAQDNGIFVKQSKLSFGEWLENWCRDYVKI
QTTQRTFESYYQNIIGHIEPALGKVILTELTPQIIQAYYARQLEKGRADGKGGLSARSVLYQHRIISKCLKQATKLGLIM
RNPADAVEPPRPRKTAISVPDKDELPRLLDAFETTPYYVFYCLLLYCGMRRGEALALRWKDIDLKQDTIQIAETAFTLRS
GEYVIKEPKTPHSRRCIDIPPTMKLLLLEYKADQTAYYAKLGVELGLHDFVFTRPNGEPLNPNTVTHTFLKAVRKAGFDK
LRLHDLRHLHATLMLQAGIHPKIVSERLGHASINITLDTYSHVMPGLQKKAVNVFDKMLSANEESLEENSVSKRLAKHEG
VSGRPYRSRTCDPLIKSQKLKNQAEPLSFALCYVY
>Mature_435_residues
MKGHIVKRSTDSWSIVIELPRDPATGKRRQSWHTIKGTKKEADKKLRELLTAQDNGIFVKQSKLSFGEWLENWCRDYVKI
QTTQRTFESYYQNIIGHIEPALGKVILTELTPQIIQAYYARQLEKGRADGKGGLSARSVLYQHRIISKCLKQATKLGLIM
RNPADAVEPPRPRKTAISVPDKDELPRLLDAFETTPYYVFYCLLLYCGMRRGEALALRWKDIDLKQDTIQIAETAFTLRS
GEYVIKEPKTPHSRRCIDIPPTMKLLLLEYKADQTAYYAKLGVELGLHDFVFTRPNGEPLNPNTVTHTFLKAVRKAGFDK
LRLHDLRHLHATLMLQAGIHPKIVSERLGHASINITLDTYSHVMPGLQKKAVNVFDKMLSANEESLEENSVSKRLAKHEG
VSGRPYRSRTCDPLIKSQKLKNQAEPLSFALCYVY

Specific function: Putative integrase that is involved in the insertion of the integrative and conjugative element ICEBs1. Required for the excision of ICEBs1 from the donor cell genome and subsequent integration in the recipient cell genome. Appears not to be transferred t

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR023109 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 49670; Mature: 49670

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGHIVKRSTDSWSIVIELPRDPATGKRRQSWHTIKGTKKEADKKLRELLTAQDNGIFVK
CCCCEEEECCCCEEEEEEECCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEE
QSKLSFGEWLENWCRDYVKIQTTQRTFESYYQNIIGHIEPALGKVILTELTPQIIQAYYA
ECCCCHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHH
RQLEKGRADGKGGLSARSVLYQHRIISKCLKQATKLGLIMRNPADAVEPPRPRKTAISVP
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCCCEECCC
DKDELPRLLDAFETTPYYVFYCLLLYCGMRRGEALALRWKDIDLKQDTIQIAETAFTLRS
CHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHEEC
GEYVIKEPKTPHSRRCIDIPPTMKLLLLEYKADQTAYYAKLGVELGLHDFVFTRPNGEPL
CCEEEECCCCCCCCEEEECCCHHHHHEEECCCCCHHHHHHHHHHCCCCCEEEECCCCCCC
NPNTVTHTFLKAVRKAGFDKLRLHDLRHLHATLMLQAGIHPKIVSERLGHASINITLDTY
CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCEEEEEEECCH
SHVMPGLQKKAVNVFDKMLSANEESLEENSVSKRLAKHEGVSGRPYRSRTCDPLIKSQKL
HHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH
KNQAEPLSFALCYVY
HCCCCCCEEEEEEEC
>Mature Secondary Structure
MKGHIVKRSTDSWSIVIELPRDPATGKRRQSWHTIKGTKKEADKKLRELLTAQDNGIFVK
CCCCEEEECCCCEEEEEEECCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEE
QSKLSFGEWLENWCRDYVKIQTTQRTFESYYQNIIGHIEPALGKVILTELTPQIIQAYYA
ECCCCHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHH
RQLEKGRADGKGGLSARSVLYQHRIISKCLKQATKLGLIMRNPADAVEPPRPRKTAISVP
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCCCEECCC
DKDELPRLLDAFETTPYYVFYCLLLYCGMRRGEALALRWKDIDLKQDTIQIAETAFTLRS
CHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHEEC
GEYVIKEPKTPHSRRCIDIPPTMKLLLLEYKADQTAYYAKLGVELGLHDFVFTRPNGEPL
CCEEEECCCCCCCCEEEECCCHHHHHEEECCCCCHHHHHHHHHHCCCCCEEEECCCCCCC
NPNTVTHTFLKAVRKAGFDKLRLHDLRHLHATLMLQAGIHPKIVSERLGHASINITLDTY
CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCEEEEEEECCH
SHVMPGLQKKAVNVFDKMLSANEESLEENSVSKRLAKHEGVSGRPYRSRTCDPLIKSQKL
HHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH
KNQAEPLSFALCYVY
HCCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]