| Definition | Dehalococcoides ethenogenes 195, complete genome. |
|---|---|
| Accession | NC_002936 |
| Length | 1,469,720 |
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The map label for this gene is 57234328
Identifier: 57234328
GI number: 57234328
Start: 836543
End: 837652
Strand: Direct
Name: 57234328
Synonym: DET0911
Alternate gene names: NA
Gene position: 836543-837652 (Clockwise)
Preceding gene: 57234329
Following gene: 57234327
Centisome position: 56.92
GC content: 47.66
Gene sequence:
>1110_bases ATGGTCGACCCGCGGACGGAAAAACTGGCGGATTTACTGGTTAACTATTCTATTGAGGTAAAGCCGGGTGACACGGTGGC GGTCAATTATTTCAGCGGTGCGTTGCCCTTAGCGGTTGAAGTATATAAAAAAATACTGGCTGCCGGAGGCCACCCCCTTA TGCAGGTCTCCAAAAACGAATTCCTGGAGTATTTGCTGAAATACGGTTCTGATGAACAGATAAGCTATGTCCACTTTCCC CAAAGGTATATAACGGAACATTATGACGCTACTATACACCTGCTGGCTGAGGAAAATACCAAATCCATGACCAGCATAGA CCCCCGGAAAATGGTAGCCTTTGAAAAAGCCCGCACCGACCTAATGGAAACCAGTATGCGCCGTACCGCCGAAGGCAATT TCCGCTGGGTACTGGCTATTTACCCCACTAACGGCTATGCCCAGGATGCCGGTATGAGTCTGGAAGAATATACTGATTTC GTTTATAACGCCTGTCTGCCGGATATGAATGACCCGGTGGGTTTCTGGAAAAACCTAAATACCCGCCAGCAGAAAGTAGT AGACTGGCTCAAGGGTAAAAAACAGGTGCATATAAAGGCCAAAGAAACTGACCTCCGCCTGAGTATAGAAGGACGTACTT TTGTAAGCTGTGACGGCAAACTCAACATGCCTGACGGGGAAATATTTACCGGCCCGGTAGAAGACAGCGCCGAAGGATAT GTATATTTTTCCTACCCTGCCATAGAGGCCGGGCGTGAAGTTACCGGGATTCGCCTCTGGTTTGAAAAGGGCAAGGTGGT AAAAGCAACCGCTGAAACTAACGAAGAATTTTTGCTTAAGACCCTGGATACTGACCCGGGTGCCAGATATCTGGGTGAAT TCGCCATTGGCACCAGTGAGGGAATCCAGAAATTTACCAAACAAATACTTTTTGATGAAAAAATCGGAGGGAGTTTCCAC CTGGCCTGCGGAGCGGGTTATCCGGAAACTGGCAGTGTCAATAAATCTGCCGTACACTGGGATATGGTATGTGACCTGCG TGACGGTGGTGAAATCTGGGTGGATGGCGAATTATTATATAAAAACGGGGAATTTATTATCGACTACTAG
Upstream 100 bases:
>100_bases TTGCTTGCATTGCCGGTAAAACCCCTGCGGTTTCACAAGTTGGATTTGCCTATCACAGCCACTATAATAAACTATAATAC ATTTTAAGCGAGGTTTATTT
Downstream 100 bases:
>100_bases TTTTTCAGTCCCAACAGAAATATCAGCCCGTTGCTAAAACGCCCTACAAATAGTCCTTTTCCATGGGGTATATGCCGGTG TATTTTAATCCGGCAGTATC
Product: aminopeptidase protein
Products: NA
Alternate protein names: Aminopeptidase II; AP-II [H]
Number of amino acids: Translated: 369; Mature: 369
Protein sequence:
>369_residues MVDPRTEKLADLLVNYSIEVKPGDTVAVNYFSGALPLAVEVYKKILAAGGHPLMQVSKNEFLEYLLKYGSDEQISYVHFP QRYITEHYDATIHLLAEENTKSMTSIDPRKMVAFEKARTDLMETSMRRTAEGNFRWVLAIYPTNGYAQDAGMSLEEYTDF VYNACLPDMNDPVGFWKNLNTRQQKVVDWLKGKKQVHIKAKETDLRLSIEGRTFVSCDGKLNMPDGEIFTGPVEDSAEGY VYFSYPAIEAGREVTGIRLWFEKGKVVKATAETNEEFLLKTLDTDPGARYLGEFAIGTSEGIQKFTKQILFDEKIGGSFH LACGAGYPETGSVNKSAVHWDMVCDLRDGGEIWVDGELLYKNGEFIIDY
Sequences:
>Translated_369_residues MVDPRTEKLADLLVNYSIEVKPGDTVAVNYFSGALPLAVEVYKKILAAGGHPLMQVSKNEFLEYLLKYGSDEQISYVHFP QRYITEHYDATIHLLAEENTKSMTSIDPRKMVAFEKARTDLMETSMRRTAEGNFRWVLAIYPTNGYAQDAGMSLEEYTDF VYNACLPDMNDPVGFWKNLNTRQQKVVDWLKGKKQVHIKAKETDLRLSIEGRTFVSCDGKLNMPDGEIFTGPVEDSAEGY VYFSYPAIEAGREVTGIRLWFEKGKVVKATAETNEEFLLKTLDTDPGARYLGEFAIGTSEGIQKFTKQILFDEKIGGSFH LACGAGYPETGSVNKSAVHWDMVCDLRDGGEIWVDGELLYKNGEFIIDY >Mature_369_residues MVDPRTEKLADLLVNYSIEVKPGDTVAVNYFSGALPLAVEVYKKILAAGGHPLMQVSKNEFLEYLLKYGSDEQISYVHFP QRYITEHYDATIHLLAEENTKSMTSIDPRKMVAFEKARTDLMETSMRRTAEGNFRWVLAIYPTNGYAQDAGMSLEEYTDF VYNACLPDMNDPVGFWKNLNTRQQKVVDWLKGKKQVHIKAKETDLRLSIEGRTFVSCDGKLNMPDGEIFTGPVEDSAEGY VYFSYPAIEAGREVTGIRLWFEKGKVVKATAETNEEFLLKTLDTDPGARYLGEFAIGTSEGIQKFTKQILFDEKIGGSFH LACGAGYPETGSVNKSAVHWDMVCDLRDGGEIWVDGELLYKNGEFIIDY
Specific function: Broad specificity metal-dependent exopeptidase, releasing all N-terminal amino acids [H]
COG id: COG2309
COG function: function code E; Leucyl aminopeptidase (aminopeptidase T)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M29 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000787 [H]
Pfam domain/function: PF02073 Peptidase_M29 [H]
EC number: NA
Molecular weight: Translated: 41604; Mature: 41604
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVDPRTEKLADLLVNYSIEVKPGDTVAVNYFSGALPLAVEVYKKILAAGGHPLMQVSKNE CCCCHHHHHHHHHHCCEEEECCCCEEEEEEECCCCHHHHHHHHHHHHCCCCHHEECCHHH FLEYLLKYGSDEQISYVHFPQRYITEHYDATIHLLAEENTKSMTSIDPRKMVAFEKARTD HHHHHHHCCCCCCEEEEECCHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHH LMETSMRRTAEGNFRWVLAIYPTNGYAQDAGMSLEEYTDFVYNACLPDMNDPVGFWKNLN HHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHCCCC TRQQKVVDWLKGKKQVHIKAKETDLRLSIEGRTFVSCDGKLNMPDGEIFTGPVEDSAEGY HHHHHHHHHHCCCEEEEEEEECCEEEEEECCCEEEEECCEECCCCCCEEECCCCCCCCCE VYFSYPAIEAGREVTGIRLWFEKGKVVKATAETNEEFLLKTLDTDPGARYLGEFAIGTSE EEEECCHHHCCCCEEEEEEEEECCCEEEEECCCCCEEEEEECCCCCCHHHHHHCCCCCHH GIQKFTKQILFDEKIGGSFHLACGAGYPETGSVNKSAVHWDMVCDLRDGGEIWVDGELLY HHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCEEEEEEEEEECCCCEEEECCEEEE KNGEFIIDY ECCCEEEEC >Mature Secondary Structure MVDPRTEKLADLLVNYSIEVKPGDTVAVNYFSGALPLAVEVYKKILAAGGHPLMQVSKNE CCCCHHHHHHHHHHCCEEEECCCCEEEEEEECCCCHHHHHHHHHHHHCCCCHHEECCHHH FLEYLLKYGSDEQISYVHFPQRYITEHYDATIHLLAEENTKSMTSIDPRKMVAFEKARTD HHHHHHHCCCCCCEEEEECCHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHH LMETSMRRTAEGNFRWVLAIYPTNGYAQDAGMSLEEYTDFVYNACLPDMNDPVGFWKNLN HHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHCCCC TRQQKVVDWLKGKKQVHIKAKETDLRLSIEGRTFVSCDGKLNMPDGEIFTGPVEDSAEGY HHHHHHHHHHCCCEEEEEEEECCEEEEEECCCEEEEECCEECCCCCCEEECCCCCCCCCE VYFSYPAIEAGREVTGIRLWFEKGKVVKATAETNEEFLLKTLDTDPGARYLGEFAIGTSE EEEECCHHHCCCCEEEEEEEEECCCEEEEECCCCCEEEEEECCCCCCHHHHHHCCCCCHH GIQKFTKQILFDEKIGGSFHLACGAGYPETGSVNKSAVHWDMVCDLRDGGEIWVDGELLY HHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCEEEEEEEEEECCCCEEEECCEEEE KNGEFIIDY ECCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9362117; 938681 [H]