Definition Dehalococcoides ethenogenes 195, complete genome.
Accession NC_002936
Length 1,469,720

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The map label for this gene is 57234237

Identifier: 57234237

GI number: 57234237

Start: 879202

End: 880254

Strand: Direct

Name: 57234237

Synonym: DET0961

Alternate gene names: NA

Gene position: 879202-880254 (Clockwise)

Preceding gene: 57234238

Following gene: 57234226

Centisome position: 59.82

GC content: 49.95

Gene sequence:

>1053_bases
ATGAATAAAAATCTTACACCGAGGATTAACTTGATAAAACAGGACGGACGCGAAGTAGAGCGCGAAAAATTAGCCATTTT
GCGTGTTCTGGCCAGCTGCCAGACACCGCTTGGCAGTAAAATCATTGCCCGCCGCCTGAAGAATGAATACGGCATTGAGC
TTTCGGAACGGGCAGTCCGCTATCACCTGATAATGCTGGATGACAGAGGAATGACCTGCAAGATAAGCCGGCGTGACGGC
CGGAGCATTACCCAGCTTGGTCTTGAGGAACTGGAAAATGCCCTGGTAACTGACAAAGTCGGCTTTGTTATTGACAAGAT
TGAGCGTCTGGCCTATCTGACAGATTTCAATCTGGACACCCTTAGCGGAATGGTGCCGGTAAATATATCCTTTTTTGCCA
AAGAGCAGTTCAAACCGGCCCTCAGGGCTATGGCCCAGGCGTATAAAGCCAATTTGTGCGTAAGTGAGCTGGTGTGCATT
GCCCATGAAGGAGACAAGATTGCGGATATCAGCGTACCCGCCGGGCAGGTTGCTTTTGCCACTGTCTGTTCCATTGTAAT
AAACGGCACCCTGCTTAAGGCAGGTATTCCCATGGATTCCCGCTTCGGGGGTACTTTGCAGTTCCACCAGAATAAACCGC
GGCGCTTTACGGATATGATTTACTATACAGGCTCTTCGCTTGACCCCTCTGAAATATTTATTGCCAGCCGGATGACCAGC
GTTTCAGAAGTAGCCCGAAGGGGTGAGGGCAAAGTATTATGTAATTTCCGCGAGATACCTGCCGCCAGTTTGCCGCTGGC
CGAAAAGATAATAGCCAAACTGAGAAACGCCGGCATTAACGGGGTACTGGTTGTAGGTGAAGCCGGTAAATCAGTTTGCG
AAATGCCGTCAGGACTGAATAAAGTAGGTATGATAATGATGGGCGGGCTTAATCCGGTAGCGGCCGCTGTTGAAAACGAT
ATACCGGCAGCCAGCCAGGCCATGAGCGGTCTGATACCCTACAGCAGCTTTAAAAATTACTGGGAAGCGGCAGGCCTTAA
AAAACCTGCCTGA

Upstream 100 bases:

>100_bases
TTTCCCGTAAAATACGCCTGCCGCTGTCCGGCCGAACAAATATAAAAATCTTGCCCTGCATACGGCAAATTATTGCCTTA
TATGACGGGGCGCTGTTACA

Downstream 100 bases:

>100_bases
CAGCTTTTACCTATCTTTATCTGCACATTTGCCTTAAACTGCCGTTTGGAAATAATATTATGTCATACTGTATCAGCGGC
TAACATACCGTCAGCATAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 350; Mature: 350

Protein sequence:

>350_residues
MNKNLTPRINLIKQDGREVEREKLAILRVLASCQTPLGSKIIARRLKNEYGIELSERAVRYHLIMLDDRGMTCKISRRDG
RSITQLGLEELENALVTDKVGFVIDKIERLAYLTDFNLDTLSGMVPVNISFFAKEQFKPALRAMAQAYKANLCVSELVCI
AHEGDKIADISVPAGQVAFATVCSIVINGTLLKAGIPMDSRFGGTLQFHQNKPRRFTDMIYYTGSSLDPSEIFIASRMTS
VSEVARRGEGKVLCNFREIPAASLPLAEKIIAKLRNAGINGVLVVGEAGKSVCEMPSGLNKVGMIMMGGLNPVAAAVEND
IPAASQAMSGLIPYSSFKNYWEAAGLKKPA

Sequences:

>Translated_350_residues
MNKNLTPRINLIKQDGREVEREKLAILRVLASCQTPLGSKIIARRLKNEYGIELSERAVRYHLIMLDDRGMTCKISRRDG
RSITQLGLEELENALVTDKVGFVIDKIERLAYLTDFNLDTLSGMVPVNISFFAKEQFKPALRAMAQAYKANLCVSELVCI
AHEGDKIADISVPAGQVAFATVCSIVINGTLLKAGIPMDSRFGGTLQFHQNKPRRFTDMIYYTGSSLDPSEIFIASRMTS
VSEVARRGEGKVLCNFREIPAASLPLAEKIIAKLRNAGINGVLVVGEAGKSVCEMPSGLNKVGMIMMGGLNPVAAAVEND
IPAASQAMSGLIPYSSFKNYWEAAGLKKPA
>Mature_350_residues
MNKNLTPRINLIKQDGREVEREKLAILRVLASCQTPLGSKIIARRLKNEYGIELSERAVRYHLIMLDDRGMTCKISRRDG
RSITQLGLEELENALVTDKVGFVIDKIERLAYLTDFNLDTLSGMVPVNISFFAKEQFKPALRAMAQAYKANLCVSELVCI
AHEGDKIADISVPAGQVAFATVCSIVINGTLLKAGIPMDSRFGGTLQFHQNKPRRFTDMIYYTGSSLDPSEIFIASRMTS
VSEVARRGEGKVLCNFREIPAASLPLAEKIIAKLRNAGINGVLVVGEAGKSVCEMPSGLNKVGMIMMGGLNPVAAAVEND
IPAASQAMSGLIPYSSFKNYWEAAGLKKPA

Specific function: Unknown

COG id: COG1693

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002846
- InterPro:   IPR013668
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01995 DUF128; PF08461 HTH_12 [H]

EC number: NA

Molecular weight: Translated: 38200; Mature: 38200

Theoretical pI: Translated: 9.19; Mature: 9.19

Prosite motif: PS00533 PORPHOBILINOGEN_DEAM

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKNLTPRINLIKQDGREVEREKLAILRVLASCQTPLGSKIIARRLKNEYGIELSERAVR
CCCCCCCCHHEEHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHCCEEE
YHLIMLDDRGMTCKISRRDGRSITQLGLEELENALVTDKVGFVIDKIERLAYLTDFNLDT
EEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
LSGMVPVNISFFAKEQFKPALRAMAQAYKANLCVSELVCIAHEGDKIADISVPAGQVAFA
HCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEECCCCHHHHH
TVCSIVINGTLLKAGIPMDSRFGGTLQFHQNKPRRFTDMIYYTGSSLDPSEIFIASRMTS
HHHHHHHCCEEEEECCCCCCCCCCEEEECCCCCCCEEEEEEEECCCCCHHHHHHHHHHHH
VSEVARRGEGKVLCNFREIPAASLPLAEKIIAKLRNAGINGVLVVGEAGKSVCEMPSGLN
HHHHHHCCCCCEEEEHHHCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCHHHHCCCCCC
KVGMIMMGGLNPVAAAVENDIPAASQAMSGLIPYSSFKNYWEAAGLKKPA
HHCEEEECCCCHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNKNLTPRINLIKQDGREVEREKLAILRVLASCQTPLGSKIIARRLKNEYGIELSERAVR
CCCCCCCCHHEEHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHCCEEE
YHLIMLDDRGMTCKISRRDGRSITQLGLEELENALVTDKVGFVIDKIERLAYLTDFNLDT
EEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
LSGMVPVNISFFAKEQFKPALRAMAQAYKANLCVSELVCIAHEGDKIADISVPAGQVAFA
HCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEECCCCHHHHH
TVCSIVINGTLLKAGIPMDSRFGGTLQFHQNKPRRFTDMIYYTGSSLDPSEIFIASRMTS
HHHHHHHCCEEEEECCCCCCCCCCEEEECCCCCCCEEEEEEEECCCCCHHHHHHHHHHHH
VSEVARRGEGKVLCNFREIPAASLPLAEKIIAKLRNAGINGVLVVGEAGKSVCEMPSGLN
HHHHHHCCCCCEEEEHHHCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCHHHHCCCCCC
KVGMIMMGGLNPVAAAVENDIPAASQAMSGLIPYSSFKNYWEAAGLKKPA
HHCEEEECCCCHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]