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The map label for this gene is slyA [C]

Identifier: 57234115

GI number: 57234115

Start: 1064576

End: 1065055

Strand: Direct

Name: slyA [C]

Synonym: DET1163

Alternate gene names: 57234115

Gene position: 1064576-1065055 (Clockwise)

Preceding gene: 57234046

Following gene: 57234114

Centisome position: 72.43

GC content: 47.08

Gene sequence:

>480_bases
ATGACAGACCAGCACAACCGGATTAAAGCAGATACCGAAAGGGATGAACTCACCCAGCAGATTCTCGAGCATATGCATGT
ACTGATACATCATATTAAGCGGGACGTATCTGCCACACACCCGCATCTCAGCCCGCCCCAAGCCCGGTTGATTTTTATAA
TCAGCCAGCACAGTGATTCAGGTATATCCGTAAAGGAATTAGCCCGTCTGATGTCAATTACCCCGGGTGCTGTCACGCAG
TTTATAAACGGGTTGATTGATAAAAACCTGATAACCCGGGAAACAGACCCGGCGGACAGGCGCAGTATCAAGATAAAACT
AACCCCGCCAGCCGAAAAGGAGATCCAAAACCTGAAAAAAGATTTCTTCAATTCAGCCGCCCGAAAATTTGGGGCGCTGA
ATACCGAAGAAATGAAAATACTAGTCAATCTGGTCAGCAAAATAAACCCCGCACCGGCTACCGAAGAAAACTTACCTTAG

Upstream 100 bases:

>100_bases
AAAAACAAACCACCCAGGATTTTCGGGGGGTTGACAAACATCTGTTTAGCTACTAAATTATTTAACAGTCAAACTACTAC
TTGGCAGGCAGCACAAGAAC

Downstream 100 bases:

>100_bases
AGGTTTGGGGATAAGCGGTTGATTTGAAAATTAGTAAGACCTTCAGTCAGATATTTCTTTACCCATGGGATTATTTTGCC
TGCGGGCAGTGATAATAAAG

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 158

Protein sequence:

>159_residues
MTDQHNRIKADTERDELTQQILEHMHVLIHHIKRDVSATHPHLSPPQARLIFIISQHSDSGISVKELARLMSITPGAVTQ
FINGLIDKNLITRETDPADRRSIKIKLTPPAEKEIQNLKKDFFNSAARKFGALNTEEMKILVNLVSKINPAPATEENLP

Sequences:

>Translated_159_residues
MTDQHNRIKADTERDELTQQILEHMHVLIHHIKRDVSATHPHLSPPQARLIFIISQHSDSGISVKELARLMSITPGAVTQ
FINGLIDKNLITRETDPADRRSIKIKLTPPAEKEIQNLKKDFFNSAARKFGALNTEEMKILVNLVSKINPAPATEENLP
>Mature_158_residues
TDQHNRIKADTERDELTQQILEHMHVLIHHIKRDVSATHPHLSPPQARLIFIISQHSDSGISVKELARLMSITPGAVTQF
INGLIDKNLITRETDPADRRSIKIKLTPPAEKEIQNLKKDFFNSAARKFGALNTEEMKILVNLVSKINPAPATEENLP

Specific function: Transcription Factor That Activates Expression Of Genes Such As Molecular Chaperones (Grol, Gros, Dnak, Grpe, And Cbpa), Proteins Involved In Acid Resistance (Hdea, Hdeb, And Gada), The Starvation Lipoprotein Slp, Virulence Protein Hlye/Clya. Represses Ex

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17951; Mature: 17820

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDQHNRIKADTERDELTQQILEHMHVLIHHIKRDVSATHPHLSPPQARLIFIISQHSDS
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCC
GISVKELARLMSITPGAVTQFINGLIDKNLITRETDPADRRSIKIKLTPPAEKEIQNLKK
CCCHHHHHHHHCCCCHHHHHHHHHHHHCCHHCCCCCCCCCCEEEEEECCCHHHHHHHHHH
DFFNSAARKFGALNTEEMKILVNLVSKINPAPATEENLP
HHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
TDQHNRIKADTERDELTQQILEHMHVLIHHIKRDVSATHPHLSPPQARLIFIISQHSDS
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCC
GISVKELARLMSITPGAVTQFINGLIDKNLITRETDPADRRSIKIKLTPPAEKEIQNLKK
CCCHHHHHHHHCCCCHHHHHHHHHHHHCCHHCCCCCCCCCCEEEEEECCCHHHHHHHHHH
DFFNSAARKFGALNTEEMKILVNLVSKINPAPATEENLP
HHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA