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The map label for this gene is 57234097

Identifier: 57234097

GI number: 57234097

Start: 1071173

End: 1072276

Strand: Direct

Name: 57234097

Synonym: DET1174

Alternate gene names: NA

Gene position: 1071173-1072276 (Clockwise)

Preceding gene: 57234098

Following gene: 57234096

Centisome position: 72.88

GC content: 50.09

Gene sequence:

>1104_bases
ATGAAAAAAGTTATCCCATTTATACTGGCACTCTCGCTGGTAGCCTGCACAGTGGCTGGCTGCGGAGATAGCCAAACAGA
TGACCCTTCAGACAACACCTCAACCCGTACTATTACTGACAGTGTGGGGCGTACGGTTGAAATCCCCACCGTAGTAGAGA
AGATTGTCCCGCTGGGTAATACCCCCCGGATGATTAGTTATCTAGGTCTGGCGGACAAGGTAGTGGGACTGGGCGGCATG
GATGCAAGCAATGTTACCCCGGTTACCGCCTACGCTTATGCCAACAAAGACGTATGGGCTAATGTACCCCTGGTGGGTAC
AGATGCCGCCGGAGCAACCGACTATTATCCGGAAGAAATTATCAGCTGTGACCCGGACGTAATCCTGTGTTCTTATACCA
AAGAACTGGCTGATGAAATCCAGACCAAAACCGGTATTCCGGTAGTGGCAGTGCCTATGGGCACTTTATTCGAGACTGAT
TATAAAGATGCGCTCCGGCTGCTGGGAAATGTCTGCGGCGTGGGAGCCCGGGCTGAAGCCGTTATTACTTATATAAATGA
CTGCCTGGCTGATTTGGCCACCAGAACTGCCGGTATTCCGGACCAGGGCAAACCCTCGGTTCTGGGAGCGGCAGCTACCT
TCAAGGGCATGCACGGTCTGGACGGAGTATATACCAAATATGCAGTTTTTGAGGTTATTTCCGCTAACGACGTTACCGAA
GGCCTATCCAACACTTCCGGTGCTTTGCTAATTGACAAAGAGCAGATTATTGTCTGGAATCCCCAGTACATATTCCTGGA
CAGCGGCGGTGTTGGTCTGGTCAGGGCTGACTACAATGACAATCCGGGCTTATATGCCCAGCTGACTGCAGTGCAGAGCG
GCAATCTTTATCAATATCCCAGCTCTACTTCATACTATTCCAACCTTGAAATACCCATTGTAAACGCCTATTATGTGGCC
AGCCTGCTCTATCCGGAGCAGTTCAGTGACATAGACTTCAACCAGAAGGCTAACGAAATTTTCAGCTTTTTCCTGGGTAT
TGACAACTACCTGAGTATCTTAGAGTCTGCCGGGGCTGGTTACGGCAAAGTAACCCTTGGTTAG

Upstream 100 bases:

>100_bases
GGGGCTGGTAACGTAAGCAAGGCCTATATTAAGCGGTTAATCCTGCTTACTCCCTGCAGATAAGCAGCAATGAAAAACAC
AAAGAAAGGTAAGTGCAGTT

Downstream 100 bases:

>100_bases
GATTGATGGAAGAAAACCGGACTAATCAATTTCATTTATACAATGCCTTTCTGAGGCGGAAAAGGCTGGTATTCCTGATT
GCCGCAGTGGCAACAGTGGT

Product: iron ABC transporter periplasmic-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 367; Mature: 367

Protein sequence:

>367_residues
MKKVIPFILALSLVACTVAGCGDSQTDDPSDNTSTRTITDSVGRTVEIPTVVEKIVPLGNTPRMISYLGLADKVVGLGGM
DASNVTPVTAYAYANKDVWANVPLVGTDAAGATDYYPEEIISCDPDVILCSYTKELADEIQTKTGIPVVAVPMGTLFETD
YKDALRLLGNVCGVGARAEAVITYINDCLADLATRTAGIPDQGKPSVLGAAATFKGMHGLDGVYTKYAVFEVISANDVTE
GLSNTSGALLIDKEQIIVWNPQYIFLDSGGVGLVRADYNDNPGLYAQLTAVQSGNLYQYPSSTSYYSNLEIPIVNAYYVA
SLLYPEQFSDIDFNQKANEIFSFFLGIDNYLSILESAGAGYGKVTLG

Sequences:

>Translated_367_residues
MKKVIPFILALSLVACTVAGCGDSQTDDPSDNTSTRTITDSVGRTVEIPTVVEKIVPLGNTPRMISYLGLADKVVGLGGM
DASNVTPVTAYAYANKDVWANVPLVGTDAAGATDYYPEEIISCDPDVILCSYTKELADEIQTKTGIPVVAVPMGTLFETD
YKDALRLLGNVCGVGARAEAVITYINDCLADLATRTAGIPDQGKPSVLGAAATFKGMHGLDGVYTKYAVFEVISANDVTE
GLSNTSGALLIDKEQIIVWNPQYIFLDSGGVGLVRADYNDNPGLYAQLTAVQSGNLYQYPSSTSYYSNLEIPIVNAYYVA
SLLYPEQFSDIDFNQKANEIFSFFLGIDNYLSILESAGAGYGKVTLG
>Mature_367_residues
MKKVIPFILALSLVACTVAGCGDSQTDDPSDNTSTRTITDSVGRTVEIPTVVEKIVPLGNTPRMISYLGLADKVVGLGGM
DASNVTPVTAYAYANKDVWANVPLVGTDAAGATDYYPEEIISCDPDVILCSYTKELADEIQTKTGIPVVAVPMGTLFETD
YKDALRLLGNVCGVGARAEAVITYINDCLADLATRTAGIPDQGKPSVLGAAATFKGMHGLDGVYTKYAVFEVISANDVTE
GLSNTSGALLIDKEQIIVWNPQYIFLDSGGVGLVRADYNDNPGLYAQLTAVQSGNLYQYPSSTSYYSNLEIPIVNAYYVA
SLLYPEQFSDIDFNQKANEIFSFFLGIDNYLSILESAGAGYGKVTLG

Specific function: Unknown

COG id: COG0614

COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 39104; Mature: 39104

Theoretical pI: Translated: 4.02; Mature: 4.02

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVIPFILALSLVACTVAGCGDSQTDDPSDNTSTRTITDSVGRTVEIPTVVEKIVPLGN
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEHHHCCCEEECHHHHHHHHCCCC
TPRMISYLGLADKVVGLGGMDASNVTPVTAYAYANKDVWANVPLVGTDAAGATDYYPEEI
CCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCEEECCCEEECCCCCCCCCCCHHH
ISCDPDVILCSYTKELADEIQTKTGIPVVAVPMGTLFETDYKDALRLLGNVCGVGARAEA
HCCCCCEEEEHHHHHHHHHHHHHCCCCEEEECCCHHHCCCHHHHHHHHHHHHCCCCHHHH
VITYINDCLADLATRTAGIPDQGKPSVLGAAATFKGMHGLDGVYTKYAVFEVISANDVTE
HHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHH
GLSNTSGALLIDKEQIIVWNPQYIFLDSGGVGLVRADYNDNPGLYAQLTAVQSGNLYQYP
HCCCCCCEEEEECCEEEEECCCEEEEECCCEEEEEECCCCCCCEEEEEEEEECCCEEECC
SSTSYYSNLEIPIVNAYYVASLLYPEQFSDIDFNQKANEIFSFFLGIDNYLSILESAGAG
CCCCCCCCCCEEEEHHHHHHHHHCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
YGKVTLG
CCEEECC
>Mature Secondary Structure
MKKVIPFILALSLVACTVAGCGDSQTDDPSDNTSTRTITDSVGRTVEIPTVVEKIVPLGN
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEHHHCCCEEECHHHHHHHHCCCC
TPRMISYLGLADKVVGLGGMDASNVTPVTAYAYANKDVWANVPLVGTDAAGATDYYPEEI
CCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCEEECCCEEECCCCCCCCCCCHHH
ISCDPDVILCSYTKELADEIQTKTGIPVVAVPMGTLFETDYKDALRLLGNVCGVGARAEA
HCCCCCEEEEHHHHHHHHHHHHHCCCCEEEECCCHHHCCCHHHHHHHHHHHHCCCCHHHH
VITYINDCLADLATRTAGIPDQGKPSVLGAAATFKGMHGLDGVYTKYAVFEVISANDVTE
HHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHH
GLSNTSGALLIDKEQIIVWNPQYIFLDSGGVGLVRADYNDNPGLYAQLTAVQSGNLYQYP
HCCCCCCEEEEECCEEEEECCCEEEEECCCEEEEEECCCCCCCEEEEEEEEECCCEEECC
SSTSYYSNLEIPIVNAYYVASLLYPEQFSDIDFNQKANEIFSFFLGIDNYLSILESAGAG
CCCCCCCCCCEEEEHHHHHHHHHCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
YGKVTLG
CCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]