| Definition | Dehalococcoides ethenogenes 195, complete genome. |
|---|---|
| Accession | NC_002936 |
| Length | 1,469,720 |
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The map label for this gene is 57233836
Identifier: 57233836
GI number: 57233836
Start: 1336905
End: 1337738
Strand: Direct
Name: 57233836
Synonym: DET1478
Alternate gene names: NA
Gene position: 1336905-1337738 (Clockwise)
Preceding gene: 57233837
Following gene: 57233834
Centisome position: 90.96
GC content: 35.61
Gene sequence:
>834_bases ATGAATAAATCTACTTCTGTTTATTTTTGCAAACTTGCTTATATACCTCAGATGACTCTTTTCCAACCATATCCTGTAGA GAATTTTGAAGACGCCATTCGCGATATCATAAGTCCTGATAAAAGCATTAATCGCTATGGGCGGACATGGCGATTTAGTT TACCTCGAAATTTTGATGGATTTCTGGCAGGAAAACTCGGATTTGTTTCAGTTGGGATCGAAAAAAAGACTAATTATGAT GAACAGGCAATGGACTTCACGGAAGAAATTGTTAATGCTAGGCAATCTAATTATGTTTATTGGATATTAGATTTGCATAC CCACATTTTGACATTCGAAACAAAGACGCCAGACATAAGGTATCAATCTTTTAGAGGAGCATTTGAAGGTTTTTTAGATT ATACCAACGGTATGGAGATTGAGGATCTAGTGGAATCTACACAATTTAATGATTGGTCAAAAAGTGTTGATTCTATATTA ACATTCACGGCAAACCTACGTGCCCCTAATCCAGATTACTCAAAACATCCCAAATTAGTCGGACAGATATTAGAGAATAC AAATGCTGACAAAGCAAAAATAGTATTAAAAAAGGCTAAGGGTTATGGCTCTCTAAAAATAGAAAGTACAATACAAGACT TGGTGAAGTATGGGGAATCTGGATATTCTACAATAAGTGCGTGCGGCGAGAAGGATGGCCGAACAAAAATATTTGATTCA AAGAAGAGAATCCCCGTAGAAAAGATAGGTGAGCCATTGCCAAAAGATGACAATAGTATTTGGAAGATACTAATAAGTGC TTATAATAAATTCATCAATCGGAGCTGTTCATAA
Upstream 100 bases:
>100_bases GTAAATCCCATTTACTAATCAAATAATACATCATGGATAAATAGGGATATCTATTGTAAATTAAGGAGTATATGATAATA TTAGCGTAAACGAGGTTTAA
Downstream 100 bases:
>100_bases AATATGAGTGGATGGGGTAAAGAGATAGTTCGAGATCCAGCTCTCTGGATTACACTCATTATAGCTGGCCTAATTGCTTT TTGGGGAGACAAAGATACTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 277; Mature: 277
Protein sequence:
>277_residues MNKSTSVYFCKLAYIPQMTLFQPYPVENFEDAIRDIISPDKSINRYGRTWRFSLPRNFDGFLAGKLGFVSVGIEKKTNYD EQAMDFTEEIVNARQSNYVYWILDLHTHILTFETKTPDIRYQSFRGAFEGFLDYTNGMEIEDLVESTQFNDWSKSVDSIL TFTANLRAPNPDYSKHPKLVGQILENTNADKAKIVLKKAKGYGSLKIESTIQDLVKYGESGYSTISACGEKDGRTKIFDS KKRIPVEKIGEPLPKDDNSIWKILISAYNKFINRSCS
Sequences:
>Translated_277_residues MNKSTSVYFCKLAYIPQMTLFQPYPVENFEDAIRDIISPDKSINRYGRTWRFSLPRNFDGFLAGKLGFVSVGIEKKTNYD EQAMDFTEEIVNARQSNYVYWILDLHTHILTFETKTPDIRYQSFRGAFEGFLDYTNGMEIEDLVESTQFNDWSKSVDSIL TFTANLRAPNPDYSKHPKLVGQILENTNADKAKIVLKKAKGYGSLKIESTIQDLVKYGESGYSTISACGEKDGRTKIFDS KKRIPVEKIGEPLPKDDNSIWKILISAYNKFINRSCS >Mature_277_residues MNKSTSVYFCKLAYIPQMTLFQPYPVENFEDAIRDIISPDKSINRYGRTWRFSLPRNFDGFLAGKLGFVSVGIEKKTNYD EQAMDFTEEIVNARQSNYVYWILDLHTHILTFETKTPDIRYQSFRGAFEGFLDYTNGMEIEDLVESTQFNDWSKSVDSIL TFTANLRAPNPDYSKHPKLVGQILENTNADKAKIVLKKAKGYGSLKIESTIQDLVKYGESGYSTISACGEKDGRTKIFDS KKRIPVEKIGEPLPKDDNSIWKILISAYNKFINRSCS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31738; Mature: 31738
Theoretical pI: Translated: 8.01; Mature: 8.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKSTSVYFCKLAYIPQMTLFQPYPVENFEDAIRDIISPDKSINRYGRTWRFSLPRNFDG CCCCCEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHCCCEEEEECCCCCCC FLAGKLGFVSVGIEKKTNYDEQAMDFTEEIVNARQSNYVYWILDLHTHILTFETKTPDIR CEECCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEEEECEEEEEEECCCCCCH YQSFRGAFEGFLDYTNGMEIEDLVESTQFNDWSKSVDSILTFTANLRAPNPDYSKHPKLV HHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH GQILENTNADKAKIVLKKAKGYGSLKIESTIQDLVKYGESGYSTISACGEKDGRTKIFDS HHHHHCCCCCHHHEEEECCCCCCCEEHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCC KKRIPVEKIGEPLPKDDNSIWKILISAYNKFINRSCS CCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MNKSTSVYFCKLAYIPQMTLFQPYPVENFEDAIRDIISPDKSINRYGRTWRFSLPRNFDG CCCCCEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHCCCEEEEECCCCCCC FLAGKLGFVSVGIEKKTNYDEQAMDFTEEIVNARQSNYVYWILDLHTHILTFETKTPDIR CEECCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEEEECEEEEEEECCCCCCH YQSFRGAFEGFLDYTNGMEIEDLVESTQFNDWSKSVDSILTFTANLRAPNPDYSKHPKLV HHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH GQILENTNADKAKIVLKKAKGYGSLKIESTIQDLVKYGESGYSTISACGEKDGRTKIFDS HHHHHCCCCCHHHEEEECCCCCCCEEHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCC KKRIPVEKIGEPLPKDDNSIWKILISAYNKFINRSCS CCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA