Definition Dehalococcoides ethenogenes 195, complete genome.
Accession NC_002936
Length 1,469,720

Click here to switch to the map view.

The map label for this gene is groES [H]

Identifier: 57233781

GI number: 57233781

Start: 1298041

End: 1298337

Strand: Direct

Name: groES [H]

Synonym: DET1427

Alternate gene names: 57233781

Gene position: 1298041-1298337 (Clockwise)

Preceding gene: 57233782

Following gene: 57233780

Centisome position: 88.32

GC content: 49.49

Gene sequence:

>297_bases
ATGGCAACTAGATTCGAACCCCTGCACAACATGGTACTCATCCAGCCCCAGGAAAAACAAGACATGAGCAAAGGCGGTAT
CATCATCCCTGACGCCGCTCAGGAAAAATCTCAGGAAGGCGTGATTGTCGCCGTGGGCCCCGGCCGTCTGGACAAAGATG
GCAAACGCGAACTCATGAGCATTAAAGTCGGTGACAAGGTTCTTTTCCCCAAATTCGGCGGTGTTGAACTTAAATCTGGC
GGTATTGATTACATCATCATGCCCGAAAGCCAGATTATGGCTAAAATCGTAGGCTAA

Upstream 100 bases:

>100_bases
CCGACTTCCCAGTGCTGTATTATATGCCTGTTAGCAGTCTCGTACTGAGACTGCTAAAACATTGCCGCAATAAATTTAGT
CAAACTTAGAAGGAGGAATA

Downstream 100 bases:

>100_bases
ATTTTTTAACGAATATTAGGAGGTATAATGGCTAAGCAGATTATATTTGGCGAAAAAGTCAGGGTCTCCCTCAAGAAGGG
CGTTGATACTCTGGCTAACA

Product: chaperonin GroES

Products: NA

Alternate protein names: GroES protein; Protein Cpn10 [H]

Number of amino acids: Translated: 98; Mature: 97

Protein sequence:

>98_residues
MATRFEPLHNMVLIQPQEKQDMSKGGIIIPDAAQEKSQEGVIVAVGPGRLDKDGKRELMSIKVGDKVLFPKFGGVELKSG
GIDYIIMPESQIMAKIVG

Sequences:

>Translated_98_residues
MATRFEPLHNMVLIQPQEKQDMSKGGIIIPDAAQEKSQEGVIVAVGPGRLDKDGKRELMSIKVGDKVLFPKFGGVELKSG
GIDYIIMPESQIMAKIVG
>Mature_97_residues
ATRFEPLHNMVLIQPQEKQDMSKGGIIIPDAAQEKSQEGVIVAVGPGRLDKDGKRELMSIKVGDKVLFPKFGGVELKSGG
IDYIIMPESQIMAKIVG

Specific function: Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter [H]

COG id: COG0234

COG function: function code O; Co-chaperonin GroES (HSP10)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GroES chaperonin family [H]

Homologues:

Organism=Escherichia coli, GI1790585, Length=94, Percent_Identity=39.3617021276596, Blast_Score=61, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17555568, Length=89, Percent_Identity=32.5842696629214, Blast_Score=62, Evalue=4e-11,
Organism=Saccharomyces cerevisiae, GI6324594, Length=96, Percent_Identity=38.5416666666667, Blast_Score=67, Evalue=4e-13,
Organism=Drosophila melanogaster, GI21358317, Length=92, Percent_Identity=38.0434782608696, Blast_Score=63, Evalue=4e-11,

Paralogues:

None

Copy number: 980 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 5720 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 1274 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020818
- InterPro:   IPR018369
- InterPro:   IPR011032 [H]

Pfam domain/function: PF00166 Cpn10 [H]

EC number: NA

Molecular weight: Translated: 10651; Mature: 10520

Theoretical pI: Translated: 7.54; Mature: 7.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATRFEPLHNMVLIQPQEKQDMSKGGIIIPDAAQEKSQEGVIVAVGPGRLDKDGKRELMS
CCCCCCCCCCEEEECCCCCCCCCCCCEEECCCCCCCCCCCEEEEECCCCCCCCCCCEEEE
IKVGDKVLFPKFGGVELKSGGIDYIIMPESQIMAKIVG
EECCCEEECCCCCCEEEECCCCCEEEECCHHEEEEECC
>Mature Secondary Structure 
ATRFEPLHNMVLIQPQEKQDMSKGGIIIPDAAQEKSQEGVIVAVGPGRLDKDGKRELMS
CCCCCCCCCEEEECCCCCCCCCCCCEEECCCCCCCCCCCEEEEECCCCCCCCCCCEEEE
IKVGDKVLFPKFGGVELKSGGIDYIIMPESQIMAKIVG
EECCCEEECCCCCCEEEECCCCCEEEECCHHEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA