| Definition | Dehalococcoides ethenogenes 195, complete genome. |
|---|---|
| Accession | NC_002936 |
| Length | 1,469,720 |
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The map label for this gene is fucA [H]
Identifier: 57233689
GI number: 57233689
Start: 1468172
End: 1468753
Strand: Direct
Name: fucA [H]
Synonym: DET1641
Alternate gene names: 57233689
Gene position: 1468172-1468753 (Clockwise)
Preceding gene: 57233690
Following gene: NA
Centisome position: 99.89
GC content: 54.81
Gene sequence:
>582_bases TTGAATAAACAGATACCCCCTGAAACCCTGAGCTGGTTTATACAGGCCGGAAAACTGCTGTTCAGCAGGGGGCTGGTTTC TTCGCACTCCGGCAACCTTAGCCAGAGACAGCAGGACAAGCTTTACATAACCAGAACAGGCAGTTCACTGCCCCTGCTGG CTGAAACAGACCTGATACTGACAGGTATAGATTATGATGACCAGTTTACCCCGCTTGCCTCAAGCGAACTGCCGGTACAC CGGGCTATTTACCGCCGCACTTCCGCCAAAGCCATTGTCCATGCCCACCCGCCGTATGCGGCCGCCCTTTCCCTGCTTGA GGCGGAAATAATACCGGACTGCGGTGAAGGACTTTACTGTATGGGGGCCATACCGGTTATCGGTTTCGGGGAGAGGGTTC ACCCCGGCGGTATGGCGGAAGAAGCGGCCCGGGCACTTGAAAACCGCAAGGTTATCGTAGTAGCCGGGCATGGCAGCTTT GCCACAGGGGAGACTATTGAAGAAGCCCTGAAATACACCTTTGCTTTGGAAGAAATGTGCCAGGTGACCTATTTAGCCCG CCAGCTGAAGCGGGCTTGCTAA
Upstream 100 bases:
>100_bases ACCGCACTATGCCGCCCATATATACCCAGCCGGATAATGTTGAAATACAGGGGCGGGTTATAGCTGTAATCCGCCAGATG GATTAGGGGATAAGCCGGCG
Downstream 100 bases:
>100_bases ACCCCCAGATTAACCCCGTCAAAGTGGCGCTGACCGCGCAGGAAATCTGCCGCAGAGCAGGCGGCCTTGCCCTCCAGCTG AAGCCGTATTATCTCAAGCT
Product: L-fuculose phosphate aldolase
Products: NA
Alternate protein names: L-fuculose-1-phosphate aldolase [H]
Number of amino acids: Translated: 193; Mature: 193
Protein sequence:
>193_residues MNKQIPPETLSWFIQAGKLLFSRGLVSSHSGNLSQRQQDKLYITRTGSSLPLLAETDLILTGIDYDDQFTPLASSELPVH RAIYRRTSAKAIVHAHPPYAAALSLLEAEIIPDCGEGLYCMGAIPVIGFGERVHPGGMAEEAARALENRKVIVVAGHGSF ATGETIEEALKYTFALEEMCQVTYLARQLKRAC
Sequences:
>Translated_193_residues MNKQIPPETLSWFIQAGKLLFSRGLVSSHSGNLSQRQQDKLYITRTGSSLPLLAETDLILTGIDYDDQFTPLASSELPVH RAIYRRTSAKAIVHAHPPYAAALSLLEAEIIPDCGEGLYCMGAIPVIGFGERVHPGGMAEEAARALENRKVIVVAGHGSF ATGETIEEALKYTFALEEMCQVTYLARQLKRAC >Mature_193_residues MNKQIPPETLSWFIQAGKLLFSRGLVSSHSGNLSQRQQDKLYITRTGSSLPLLAETDLILTGIDYDDQFTPLASSELPVH RAIYRRTSAKAIVHAHPPYAAALSLLEAEIIPDCGEGLYCMGAIPVIGFGERVHPGGMAEEAARALENRKVIVVAGHGSF ATGETIEEALKYTFALEEMCQVTYLARQLKRAC
Specific function: Catalyzes the reversible aldol cleavage of L-fuculose-1- phosphate to dihydroxyacetone phosphate (DHAP) and L-lactaldehyde [H]
COG id: COG0235
COG function: function code G; Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldolase class II family. AraD/FucA subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789164, Length=167, Percent_Identity=31.1377245508982, Blast_Score=63, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001303 [H]
Pfam domain/function: PF00596 Aldolase_II [H]
EC number: =4.1.2.17 [H]
Molecular weight: Translated: 21087; Mature: 21087
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKQIPPETLSWFIQAGKLLFSRGLVSSHSGNLSQRQQDKLYITRTGSSLPLLAETDLIL CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCEEECCCEEE TGIDYDDQFTPLASSELPVHRAIYRRTSAKAIVHAHPPYAAALSLLEAEIIPDCGEGLYC EECCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCEEE MGAIPVIGFGERVHPGGMAEEAARALENRKVIVVAGHGSFATGETIEEALKYTFALEEMC EECCCEECCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHH QVTYLARQLKRAC HHHHHHHHHHHCC >Mature Secondary Structure MNKQIPPETLSWFIQAGKLLFSRGLVSSHSGNLSQRQQDKLYITRTGSSLPLLAETDLIL CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCEEECCCEEE TGIDYDDQFTPLASSELPVHRAIYRRTSAKAIVHAHPPYAAALSLLEAEIIPDCGEGLYC EECCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCEEE MGAIPVIGFGERVHPGGMAEEAARALENRKVIVVAGHGSFATGETIEEALKYTFALEEMC EECCCEECCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHH QVTYLARQLKRAC HHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA