| Definition | Dehalococcoides ethenogenes 195, complete genome. |
|---|---|
| Accession | NC_002936 |
| Length | 1,469,720 |
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The map label for this gene is glcK [H]
Identifier: 57233593
GI number: 57233593
Start: 40831
End: 41841
Strand: Direct
Name: glcK [H]
Synonym: DET0049
Alternate gene names: 57233593
Gene position: 40831-41841 (Clockwise)
Preceding gene: 57233594
Following gene: 57233592
Centisome position: 2.78
GC content: 56.38
Gene sequence:
>1011_bases GTGAACCGGAGTAATTTAGAGGCCATACTTAAGCCCTGTTTGTGCCTGGATATAGGCGGCAGTAAAATCCGCTCGGCGGT AGTGACCCATGACGGACGGGTGGTGGCCTGGGAACAGGAGCCTACCTGCGCCCGGAACGGGGCGGAGGGTGTATTTGAGA ATATCTGCCGGGTGCTTGAGCGCCTGCTTGAGCGTAACAACCTTTGTATCTCCCAGTTTGAGGCCCTGTCTGCGGCGGTA GCCGGGGGTATAGATATGCCAAACGGACTGGTTACCCAGTCTCCCCATCTGCCCGTCTGGCGGGATGTACCCCTTCGGGA TATGCTGGCAGAGCGTTATCTTAAAACATTCCTTATAAATGATGCCTCGGCCGCCGCTTTGGCCGAACACAAACTGGGAG CGGGGCGGGGGGTTAAAAACCTGGTTTACCTGACGGTCTCTACCGGTATCGGGGGCGGTATTATTATAAATGATGAGCTT TATCTGGGGCAGAGCGGCTGTGCCGGTGAAATAGGGCATATGTGTCTGGATATAAACGGCACTGAAGATGTCTGCGGCAA TGTGGGCTGTCTGGAAACGCTGGCTTCGGGTACGGCTATTGTCCGCAGGGTTCAGGCCGAACTTGCCGGGGGTGAGTTTT CCCTGCTTTCAGAGCGGTTTAAGGCGGATTACTCCGCTTTGACGGCTGAGGATATCGGCCGGGCGGCTTCCGAAGGTGAC AGGCTGTGCCAGGGGGTTATCCGCCGGGCAGGCGAATATTTGGGAATAGGTCTGGCCGGTATTGCCAATATATTTAACCC TGAGCTTATTATACTGGGGGGTGGGGTTTCCAAACTGGGGGAGATTTTTATTGAGCCTGCCCGCAAAATGCTTTTCAAAC GGGCTTTCCGTCTGGCGGGGGATGATGTCCGGCTGGTTGCTTCGTTTCTGGGGGATAATGCCGGGGTGACCGGGGCGGCA CTTTATGCCTACGGCTGCCTGGGGGGCGGGGGTAAACCTTCTCAGGGCTGA
Upstream 100 bases:
>100_bases CAAGTATATTGTGATGGTGTATGCCGGAATAGGCCTGATAGACTGGCTGCCTTTCCTGAAGAGCTAGGTGCTTGTTTAGC TTTAAAAGTAAGGGGGCTTT
Downstream 100 bases:
>100_bases ACGGGTGTTATATATAATATAGAAGACCCCCTGTCTCTTTATTAAAATTGACAGTATAACGGGCTTAAACTAAAATCGTA TTTATCTTATCTATCTTGAA
Product: ROK family protein
Products: NA
Alternate protein names: Glucose kinase [H]
Number of amino acids: Translated: 336; Mature: 336
Protein sequence:
>336_residues MNRSNLEAILKPCLCLDIGGSKIRSAVVTHDGRVVAWEQEPTCARNGAEGVFENICRVLERLLERNNLCISQFEALSAAV AGGIDMPNGLVTQSPHLPVWRDVPLRDMLAERYLKTFLINDASAAALAEHKLGAGRGVKNLVYLTVSTGIGGGIIINDEL YLGQSGCAGEIGHMCLDINGTEDVCGNVGCLETLASGTAIVRRVQAELAGGEFSLLSERFKADYSALTAEDIGRAASEGD RLCQGVIRRAGEYLGIGLAGIANIFNPELIILGGGVSKLGEIFIEPARKMLFKRAFRLAGDDVRLVASFLGDNAGVTGAA LYAYGCLGGGGKPSQG
Sequences:
>Translated_336_residues MNRSNLEAILKPCLCLDIGGSKIRSAVVTHDGRVVAWEQEPTCARNGAEGVFENICRVLERLLERNNLCISQFEALSAAV AGGIDMPNGLVTQSPHLPVWRDVPLRDMLAERYLKTFLINDASAAALAEHKLGAGRGVKNLVYLTVSTGIGGGIIINDEL YLGQSGCAGEIGHMCLDINGTEDVCGNVGCLETLASGTAIVRRVQAELAGGEFSLLSERFKADYSALTAEDIGRAASEGD RLCQGVIRRAGEYLGIGLAGIANIFNPELIILGGGVSKLGEIFIEPARKMLFKRAFRLAGDDVRLVASFLGDNAGVTGAA LYAYGCLGGGGKPSQG >Mature_336_residues MNRSNLEAILKPCLCLDIGGSKIRSAVVTHDGRVVAWEQEPTCARNGAEGVFENICRVLERLLERNNLCISQFEALSAAV AGGIDMPNGLVTQSPHLPVWRDVPLRDMLAERYLKTFLINDASAAALAEHKLGAGRGVKNLVYLTVSTGIGGGIIINDEL YLGQSGCAGEIGHMCLDINGTEDVCGNVGCLETLASGTAIVRRVQAELAGGEFSLLSERFKADYSALTAEDIGRAASEGD RLCQGVIRRAGEYLGIGLAGIANIFNPELIILGGGVSKLGEIFIEPARKMLFKRAFRLAGDDVRLVASFLGDNAGVTGAA LYAYGCLGGGGKPSQG
Specific function: Acts As A Repressor Of The Nagebacd Operon And Acts Both As An Activator And A Repressor For The Transcription Of The Glmsu Operon. [C]
COG id: COG1940
COG function: function code KG; Transcriptional regulator/sugar kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ROK (nagC/xylR) family [H]
Homologues:
Organism=Homo sapiens, GI190014632, Length=277, Percent_Identity=33.2129963898917, Blast_Score=109, Evalue=4e-24, Organism=Homo sapiens, GI4885285, Length=277, Percent_Identity=33.2129963898917, Blast_Score=108, Evalue=5e-24, Organism=Homo sapiens, GI298566325, Length=277, Percent_Identity=33.2129963898917, Blast_Score=108, Evalue=5e-24, Organism=Homo sapiens, GI298566315, Length=299, Percent_Identity=31.7725752508361, Blast_Score=108, Evalue=5e-24, Organism=Homo sapiens, GI298566312, Length=116, Percent_Identity=35.3448275862069, Blast_Score=69, Evalue=5e-12, Organism=Escherichia coli, GI1786891, Length=299, Percent_Identity=28.4280936454849, Blast_Score=119, Evalue=2e-28, Organism=Escherichia coli, GI1787878, Length=281, Percent_Identity=26.3345195729537, Blast_Score=114, Evalue=1e-26, Organism=Escherichia coli, GI1787363, Length=317, Percent_Identity=25.5520504731861, Blast_Score=85, Evalue=8e-18, Organism=Escherichia coli, GI87081733, Length=317, Percent_Identity=26.4984227129338, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI87082127, Length=210, Percent_Identity=27.6190476190476, Blast_Score=82, Evalue=3e-17, Organism=Escherichia coli, GI87082230, Length=266, Percent_Identity=31.9548872180451, Blast_Score=82, Evalue=5e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000600 - InterPro: IPR004654 [H]
Pfam domain/function: PF00480 ROK [H]
EC number: =2.7.1.2 [H]
Molecular weight: Translated: 35397; Mature: 35397
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: PS01125 ROK
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRSNLEAILKPCLCLDIGGSKIRSAVVTHDGRVVAWEQEPTCARNGAEGVFENICRVLE CCCCHHHHHHHHHHEEECCCHHHHHHHEECCCEEEEECCCCCHHCCCHHHHHHHHHHHHH RLLERNNLCISQFEALSAAVAGGIDMPNGLVTQSPHLPVWRDVPLRDMLAERYLKTFLIN HHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC DASAAALAEHKLGAGRGVKNLVYLTVSTGIGGGIIINDELYLGQSGCAGEIGHMCLDING CCHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCEEECCEEEECCCCCCCCCCCEEEECCC TEDVCGNVGCLETLASGTAIVRRVQAELAGGEFSLLSERFKADYSALTAEDIGRAASEGD CHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLCQGVIRRAGEYLGIGLAGIANIFNPELIILGGGVSKLGEIFIEPARKMLFKRAFRLAG HHHHHHHHHCHHHHCCHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCC DDVRLVASFLGDNAGVTGAALYAYGCLGGGGKPSQG CHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MNRSNLEAILKPCLCLDIGGSKIRSAVVTHDGRVVAWEQEPTCARNGAEGVFENICRVLE CCCCHHHHHHHHHHEEECCCHHHHHHHEECCCEEEEECCCCCHHCCCHHHHHHHHHHHHH RLLERNNLCISQFEALSAAVAGGIDMPNGLVTQSPHLPVWRDVPLRDMLAERYLKTFLIN HHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC DASAAALAEHKLGAGRGVKNLVYLTVSTGIGGGIIINDELYLGQSGCAGEIGHMCLDING CCHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCEEECCEEEECCCCCCCCCCCEEEECCC TEDVCGNVGCLETLASGTAIVRRVQAELAGGEFSLLSERFKADYSALTAEDIGRAASEGD CHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLCQGVIRRAGEYLGIGLAGIANIFNPELIILGGGVSKLGEIFIEPARKMLFKRAFRLAG HHHHHHHHHCHHHHCCHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCC DDVRLVASFLGDNAGVTGAALYAYGCLGGGGKPSQG CHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11058132 [H]