| Definition | Dehalococcoides ethenogenes 195, complete genome. |
|---|---|
| Accession | NC_002936 |
| Length | 1,469,720 |
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The map label for this gene is 57233586
Identifier: 57233586
GI number: 57233586
Start: 1450411
End: 1451751
Strand: Direct
Name: 57233586
Synonym: DET1621
Alternate gene names: NA
Gene position: 1450411-1451751 (Clockwise)
Preceding gene: 57233587
Following gene: 57233585
Centisome position: 98.69
GC content: 49.74
Gene sequence:
>1341_bases ATGCCTGAGAAAGAGCTGAACCCTGAACCCGATAATTCCAGAGAACCCCATGATGAAGACTTTGAACCTCTAGACAAAAA TAACGAGTTTTCCAAAGAAAACTCTGAACCCGCAGATGAATATGAAGAACCTCCGCTGGAACCTGAAACCCCGGCGGAGG TTTCCCAATCAGAGAAAATACCGGGCTACTACTTTTACCGCCGTAAACAAGCTAAGACCAAACTAAAAGGCAGGCACTCC AAAATGCCTGCCTGGTTTAACATAAGCCTGGCGGTACTGATTGTACTGGGCGTAATCTTCGGCAGCTGGGGGCTGACAGC CGGGCATTTCCCGCCTTGGGGTATAGCGGTTGATGTCTCCATTTCCCCGTCCGGTGGGGGAACAGTAAACCTAAGCCCGG ATAAATCTTCTTACAGCCGCGGCTCAAGTATTAACCTGAATGCGGTGGCGGCTGCCGGTTACCGTTTTGACCACTGGAGC GGAGACTTAAGCGGTACTAACCCAGCCGTAAGCCTCAGCCTGAACTCATCTAAGAATATAGTAGCCAATTTTGTAAGGCA GTTTCAGCTTAACATAAGCACCTCACCCCAGGCAGGGGGCAGTCTAAGCACAGTCAGCGGCAGCTTTGATGCCGGGTCTG TCATAGAGCTAAGCGCTAATCCTATGCAGGGTTACCGTTTTGACCACTGGAGCGGAGATTTAAGCGGTACTGACCCCTCC ATCAGCTTTATAATGGATGCCAACAAGACTATTGTGGCTAATTTCGTACCCCTGCTGCTGCTTGCGGTTAATATCTCACC GAATGCCGCCGGTATTGTCACCCCGGAAGGGGACTATTTTGACTACGGGGCCAGCATAACCCTGACAGCCCAGGCCGCCC CCGGCTACCAGTTTATAGGCTGGACAGGAGACCTGACTACTAATCTGACTACTATAAACATTACGATGGATAAAAATTAC ACCTTAACCGCCAACTTTGCACCGGTTATCCAGACCACTTCTTTAGTACTGCCTAACCGTATCGGCGAATCTACCTGGAT AAGCTGGAGCAAGGAGCTTCTGAAAGACCAGTACATAGTCATCAATTCCAGCCTGACCGGTGCCTTTAACCTGTCGGATT CAAGCCACCTCTGGCGGGTAGAAGTATTCGGTCCGGACGGAGAACATATTGAAAACTGGTTCGGCGACTACTGGCTGACC CCGGAACATATTTTTGCTTTTACCGCCCAGGTAAGCGGTACCTATATGCTGAAAATATCCCACTACAGTTCATTTATAAA AGACCTAAATATGTCATTCAGTCCCGGGGGCTGGGTGATAAGCGGTTATTCCTGGAGCTAA
Upstream 100 bases:
>100_bases AAGCATAGCCATTATTGGTCTTTGTCTGTATTTTGCCCGTATCAGGCTGGAGAGAAAAGAGTTATAATAGGAGAGAAAAT GTGAAGGAAGGTTGAAGGAG
Downstream 100 bases:
>100_bases CGCAAAGACCTGTAACTGCTAAACTCAGACCGGTATAGAGGCAAGACCTATGCCGGTCTTTGCGTTAACACATATAGCCT AAGGAGAGAAAGATGAAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: Cell Wall/Surface Repeat-Containing Protein
Number of amino acids: Translated: 446; Mature: 445
Protein sequence:
>446_residues MPEKELNPEPDNSREPHDEDFEPLDKNNEFSKENSEPADEYEEPPLEPETPAEVSQSEKIPGYYFYRRKQAKTKLKGRHS KMPAWFNISLAVLIVLGVIFGSWGLTAGHFPPWGIAVDVSISPSGGGTVNLSPDKSSYSRGSSINLNAVAAAGYRFDHWS GDLSGTNPAVSLSLNSSKNIVANFVRQFQLNISTSPQAGGSLSTVSGSFDAGSVIELSANPMQGYRFDHWSGDLSGTDPS ISFIMDANKTIVANFVPLLLLAVNISPNAAGIVTPEGDYFDYGASITLTAQAAPGYQFIGWTGDLTTNLTTINITMDKNY TLTANFAPVIQTTSLVLPNRIGESTWISWSKELLKDQYIVINSSLTGAFNLSDSSHLWRVEVFGPDGEHIENWFGDYWLT PEHIFAFTAQVSGTYMLKISHYSSFIKDLNMSFSPGGWVISGYSWS
Sequences:
>Translated_446_residues MPEKELNPEPDNSREPHDEDFEPLDKNNEFSKENSEPADEYEEPPLEPETPAEVSQSEKIPGYYFYRRKQAKTKLKGRHS KMPAWFNISLAVLIVLGVIFGSWGLTAGHFPPWGIAVDVSISPSGGGTVNLSPDKSSYSRGSSINLNAVAAAGYRFDHWS GDLSGTNPAVSLSLNSSKNIVANFVRQFQLNISTSPQAGGSLSTVSGSFDAGSVIELSANPMQGYRFDHWSGDLSGTDPS ISFIMDANKTIVANFVPLLLLAVNISPNAAGIVTPEGDYFDYGASITLTAQAAPGYQFIGWTGDLTTNLTTINITMDKNY TLTANFAPVIQTTSLVLPNRIGESTWISWSKELLKDQYIVINSSLTGAFNLSDSSHLWRVEVFGPDGEHIENWFGDYWLT PEHIFAFTAQVSGTYMLKISHYSSFIKDLNMSFSPGGWVISGYSWS >Mature_445_residues PEKELNPEPDNSREPHDEDFEPLDKNNEFSKENSEPADEYEEPPLEPETPAEVSQSEKIPGYYFYRRKQAKTKLKGRHSK MPAWFNISLAVLIVLGVIFGSWGLTAGHFPPWGIAVDVSISPSGGGTVNLSPDKSSYSRGSSINLNAVAAAGYRFDHWSG DLSGTNPAVSLSLNSSKNIVANFVRQFQLNISTSPQAGGSLSTVSGSFDAGSVIELSANPMQGYRFDHWSGDLSGTDPSI SFIMDANKTIVANFVPLLLLAVNISPNAAGIVTPEGDYFDYGASITLTAQAAPGYQFIGWTGDLTTNLTTINITMDKNYT LTANFAPVIQTTSLVLPNRIGESTWISWSKELLKDQYIVINSSLTGAFNLSDSSHLWRVEVFGPDGEHIENWFGDYWLTP EHIFAFTAQVSGTYMLKISHYSSFIKDLNMSFSPGGWVISGYSWS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48822; Mature: 48690
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEKELNPEPDNSREPHDEDFEPLDKNNEFSKENSEPADEYEEPPLEPETPAEVSQSEKI CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHCCCCCCC PGYYFYRRKQAKTKLKGRHSKMPAWFNISLAVLIVLGVIFGSWGLTAGHFPPWGIAVDVS CCEEEEEHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEE ISPSGGGTVNLSPDKSSYSRGSSINLNAVAAAGYRFDHWSGDLSGTNPAVSLSLNSSKNI ECCCCCCEEEECCCCCCCCCCCCEEEEEEEECCEEEECCCCCCCCCCCEEEEEECCCCHH VANFVRQFQLNISTSPQAGGSLSTVSGSFDAGSVIELSANPMQGYRFDHWSGDLSGTDPS HHHHHHHEEEEECCCCCCCCCEEEECCCCCCCCEEEEECCCCCCCEECCCCCCCCCCCCC ISFIMDANKTIVANFVPLLLLAVNISPNAAGIVTPEGDYFDYGASITLTAQAAPGYQFIG EEEEEECCCEEEHHHHCEEEEEEECCCCCCEEECCCCCCEECCCEEEEEEECCCCEEEEE WTGDLTTNLTTINITMDKNYTLTANFAPVIQTTSLVLPNRIGESTWISWSKELLKDQYIV ECCCCCCCEEEEEEEECCCEEEEECCCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCEEE INSSLTGAFNLSDSSHLWRVEVFGPDGEHIENWFGDYWLTPEHIFAFTAQVSGTYMLKIS EECCCCEEEECCCCCCEEEEEEECCCCHHHHHHHCCCCCCHHHEEEEEEEECCEEEEEEH HYSSFIKDLNMSFSPGGWVISGYSWS HHHHHHHHCCCCCCCCCCEEECCCCC >Mature Secondary Structure PEKELNPEPDNSREPHDEDFEPLDKNNEFSKENSEPADEYEEPPLEPETPAEVSQSEKI CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHCCCCCCC PGYYFYRRKQAKTKLKGRHSKMPAWFNISLAVLIVLGVIFGSWGLTAGHFPPWGIAVDVS CCEEEEEHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEE ISPSGGGTVNLSPDKSSYSRGSSINLNAVAAAGYRFDHWSGDLSGTNPAVSLSLNSSKNI ECCCCCCEEEECCCCCCCCCCCCEEEEEEEECCEEEECCCCCCCCCCCEEEEEECCCCHH VANFVRQFQLNISTSPQAGGSLSTVSGSFDAGSVIELSANPMQGYRFDHWSGDLSGTDPS HHHHHHHEEEEECCCCCCCCCEEEECCCCCCCCEEEEECCCCCCCEECCCCCCCCCCCCC ISFIMDANKTIVANFVPLLLLAVNISPNAAGIVTPEGDYFDYGASITLTAQAAPGYQFIG EEEEEECCCEEEHHHHCEEEEEEECCCCCCEEECCCCCCEECCCEEEEEEECCCCEEEEE WTGDLTTNLTTINITMDKNYTLTANFAPVIQTTSLVLPNRIGESTWISWSKELLKDQYIV ECCCCCCCEEEEEEEECCCEEEEECCCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCEEE INSSLTGAFNLSDSSHLWRVEVFGPDGEHIENWFGDYWLTPEHIFAFTAQVSGTYMLKIS EECCCCEEEECCCCCCEEEEEEECCCCHHHHHHHCCCCCCHHHEEEEEEEECCEEEEEEH HYSSFIKDLNMSFSPGGWVISGYSWS HHHHHHHHCCCCCCCCCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA