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The map label for this gene is ywpD [H]

Identifier: 56965748

GI number: 56965748

Start: 4154435

End: 4156267

Strand: Direct

Name: ywpD [H]

Synonym: ABC3990

Alternate gene names: 56965748

Gene position: 4154435-4156267 (Clockwise)

Preceding gene: 56965747

Following gene: 56965755

Centisome position: 96.53

GC content: 43.75

Gene sequence:

>1833_bases
ATGAATGAACACAGAGATCAATTTTTGGCAAACATGTCAGAGGAATTTAAGAATCCGCTCCATGGCATCCTTAACATGTC
CCACTCTGTTTTAAAGAGAGAACGGCATATGTTACAGGAAAGAAGCATTGAAGAGCTTGAAACCGTTTTGTCGATCGGAC
ATCGGCTGACATTGCGTTTGAATGATTTGATTGACATGATGAGCCTGCAAGAAGGATCCCTCCGTCTACAGAAAAAAGCG
GTATCGATTCAACCTATTGTCACTGGAGTCCTTGACATGCTGCAATACAGCACAGAAGTCAAGCGTATTAAAATGGTTAA
TCAAATCGCCAAAGACTTTCCACCCGTCATCGCGGATGAAAGTCGACTCGTTCAAATTGTTTACAATTTATTGCATAATG
CAGTCAAGTATACAGACGAAGGAATTATTTCCGTGCGAGCTTTTAAGGAAAACGAAAATGCTCTTATTGTGATTTCCGAT
ACAGGAATTGGTATGGACGAGGACATCCTTAAGCGCCTCTTTCGTCCGTACGAGCAAGCAAATGCAAACGAAACCATGAT
TGAAGGAGGGTTTGGACTAGGGTTAAGTATAAGTAAGCAATTAGTTGAGCTTCACGGAGGCACATTAGAGGTATCCTCTG
CTGTAGGAGAAGGCTCAACATTTACACTTTCATTAAAATTAGCTGAATTGAAAAATGAGCAAGACAAGAGTGGCGATCCC
GCATTCGAGCAGTCGTCGTCAGTCGTACCACCCCTAGAAAAGAAGCCACTTTATATGAAAGAAGTCGAAGCCCAGTTAGC
TACGACACAAACTAGCTTAAGCGAATTAAGCCATGCCCGCCCCCGTATATTAATGGTTGATGACGATCCAGCCCATCTTC
AAGTACTTGAAGGGATACTATCACCAGAAGATTATGATGTAACCATGGTAACAAGCGGCAAAGAGGCGTTGGCTATGTTA
GATGCCCAGGAGTGGGATCTCGTTATCTCAGATACGATGATGCCGCAGCTGTCTGGTTACGAGCTAACCCGATTGATTCG
TAAGCGGTTCACACTGATTGAGCTTCCTGTGTTGCTCCTTACATCTAGAAGCCAATCGAAAGATATTCAAACTGGCTTCT
TGGCCGGGGCCAACGATTATGTGACAAAACCAGTCAAAGCGCTAGAATTAAGGGCACGGATTGAGGCGCTAACGACGATC
AAACAAATGGTTCAAGAACAATTGCGGTTGGAAGCGGCATGGCTGCAAGCACAAATTCAACCACACTTTTTGTTCAATGC
CTTAAATGCAGTAGCCGCTTTAAGTGAAACCGCCCTCGATAAAATGCATGATTTGCTACAGGAATTTAGCGACTTTTTGC
GCGCCAAATTCCAATTTCAAAATATGGACGAACTCGTTCCCATTGAGGAAGAGCTTAGCCTGGTGCGCTCCTATCTCTAC
ATTGAAAAAGTCCGGTTTGAAGAGAGGCTGGAAATTGATTGGCAAGTAGAAGACAGCGACATAAAAGTCCCGTTTCTTTC
CATTCAACCTTTAGTGGAAAATGCGATTAGGCACGGCATTATGAAACGCCCTCATGGCGGAAAGGTCCTTATTCAAGTTT
CTAACAATAAAACGCATGCCGTCGTATCAGTCGAAGATGACGGAGTCGGAATGGACGACGTTCAACAGCAACGCATTTTA
GAGAGAAAAGCCGCTAGCCGGTCAGGGGTTGGATTAATTAATACAGACCAGCGGTTAAAACGGCACTTTGGCACAGGGCT
TCAAATTGAAAGTGAAAAAGGCAAAGGAACAAAGATATCGTTTCATGTAAAGCACAGAAATCGGTCAAAATAG

Upstream 100 bases:

>100_bases
TTCGATTTGATTCATTTAATGGATAGTGCTGTCTCTGTCTGGTTTAAGGGTGACTTCACATGCATACTAGAACATAAAAG
CATGCGGCAACACTGCAAAA

Downstream 100 bases:

>100_bases
ACTTCACCATACGAGCGAGCATGGCGGTAAAGGTCCGCCATGCTTTTATTAGTTGTTTTTTGTAGGGGAATTAACAAAAT
GAAAACAGTACGCTAAGGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 610; Mature: 610

Protein sequence:

>610_residues
MNEHRDQFLANMSEEFKNPLHGILNMSHSVLKRERHMLQERSIEELETVLSIGHRLTLRLNDLIDMMSLQEGSLRLQKKA
VSIQPIVTGVLDMLQYSTEVKRIKMVNQIAKDFPPVIADESRLVQIVYNLLHNAVKYTDEGIISVRAFKENENALIVISD
TGIGMDEDILKRLFRPYEQANANETMIEGGFGLGLSISKQLVELHGGTLEVSSAVGEGSTFTLSLKLAELKNEQDKSGDP
AFEQSSSVVPPLEKKPLYMKEVEAQLATTQTSLSELSHARPRILMVDDDPAHLQVLEGILSPEDYDVTMVTSGKEALAML
DAQEWDLVISDTMMPQLSGYELTRLIRKRFTLIELPVLLLTSRSQSKDIQTGFLAGANDYVTKPVKALELRARIEALTTI
KQMVQEQLRLEAAWLQAQIQPHFLFNALNAVAALSETALDKMHDLLQEFSDFLRAKFQFQNMDELVPIEEELSLVRSYLY
IEKVRFEERLEIDWQVEDSDIKVPFLSIQPLVENAIRHGIMKRPHGGKVLIQVSNNKTHAVVSVEDDGVGMDDVQQQRIL
ERKAASRSGVGLINTDQRLKRHFGTGLQIESEKGKGTKISFHVKHRNRSK

Sequences:

>Translated_610_residues
MNEHRDQFLANMSEEFKNPLHGILNMSHSVLKRERHMLQERSIEELETVLSIGHRLTLRLNDLIDMMSLQEGSLRLQKKA
VSIQPIVTGVLDMLQYSTEVKRIKMVNQIAKDFPPVIADESRLVQIVYNLLHNAVKYTDEGIISVRAFKENENALIVISD
TGIGMDEDILKRLFRPYEQANANETMIEGGFGLGLSISKQLVELHGGTLEVSSAVGEGSTFTLSLKLAELKNEQDKSGDP
AFEQSSSVVPPLEKKPLYMKEVEAQLATTQTSLSELSHARPRILMVDDDPAHLQVLEGILSPEDYDVTMVTSGKEALAML
DAQEWDLVISDTMMPQLSGYELTRLIRKRFTLIELPVLLLTSRSQSKDIQTGFLAGANDYVTKPVKALELRARIEALTTI
KQMVQEQLRLEAAWLQAQIQPHFLFNALNAVAALSETALDKMHDLLQEFSDFLRAKFQFQNMDELVPIEEELSLVRSYLY
IEKVRFEERLEIDWQVEDSDIKVPFLSIQPLVENAIRHGIMKRPHGGKVLIQVSNNKTHAVVSVEDDGVGMDDVQQQRIL
ERKAASRSGVGLINTDQRLKRHFGTGLQIESEKGKGTKISFHVKHRNRSK
>Mature_610_residues
MNEHRDQFLANMSEEFKNPLHGILNMSHSVLKRERHMLQERSIEELETVLSIGHRLTLRLNDLIDMMSLQEGSLRLQKKA
VSIQPIVTGVLDMLQYSTEVKRIKMVNQIAKDFPPVIADESRLVQIVYNLLHNAVKYTDEGIISVRAFKENENALIVISD
TGIGMDEDILKRLFRPYEQANANETMIEGGFGLGLSISKQLVELHGGTLEVSSAVGEGSTFTLSLKLAELKNEQDKSGDP
AFEQSSSVVPPLEKKPLYMKEVEAQLATTQTSLSELSHARPRILMVDDDPAHLQVLEGILSPEDYDVTMVTSGKEALAML
DAQEWDLVISDTMMPQLSGYELTRLIRKRFTLIELPVLLLTSRSQSKDIQTGFLAGANDYVTKPVKALELRARIEALTTI
KQMVQEQLRLEAAWLQAQIQPHFLFNALNAVAALSETALDKMHDLLQEFSDFLRAKFQFQNMDELVPIEEELSLVRSYLY
IEKVRFEERLEIDWQVEDSDIKVPFLSIQPLVENAIRHGIMKRPHGGKVLIQVSNNKTHAVVSVEDDGVGMDDVQQQRIL
ERKAASRSGVGLINTDQRLKRHFGTGLQIESEKGKGTKISFHVKHRNRSK

Specific function: Member Of The Two-Component Regulatory System Arcb/Arca. Sensor-Regulator Protein For Anaerobic Repression Of The Arc Modulon. Activates Arca Via A Four-Step Phosphorelay. Arcb Can Also Dephosphorylate Arca By A Reverse Phosphorelay Involving His- 717 And

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI48994928, Length=392, Percent_Identity=27.2959183673469, Blast_Score=147, Evalue=2e-36,
Organism=Escherichia coli, GI1788713, Length=415, Percent_Identity=26.2650602409639, Blast_Score=132, Evalue=8e-32,
Organism=Escherichia coli, GI87081816, Length=353, Percent_Identity=24.6458923512748, Blast_Score=121, Evalue=1e-28,
Organism=Escherichia coli, GI1789149, Length=229, Percent_Identity=34.4978165938865, Blast_Score=118, Evalue=1e-27,
Organism=Escherichia coli, GI1788723, Length=210, Percent_Identity=35.2380952380952, Blast_Score=115, Evalue=8e-27,
Organism=Escherichia coli, GI1788446, Length=203, Percent_Identity=31.5270935960591, Blast_Score=105, Evalue=9e-24,
Organism=Escherichia coli, GI145693157, Length=237, Percent_Identity=27.0042194092827, Blast_Score=95, Evalue=2e-20,
Organism=Escherichia coli, GI1790436, Length=222, Percent_Identity=29.2792792792793, Blast_Score=91, Evalue=2e-19,
Organism=Escherichia coli, GI1788393, Length=229, Percent_Identity=27.5109170305677, Blast_Score=81, Evalue=2e-16,
Organism=Escherichia coli, GI1788549, Length=159, Percent_Identity=29.559748427673, Blast_Score=75, Evalue=8e-15,
Organism=Escherichia coli, GI1786912, Length=227, Percent_Identity=26.8722466960352, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI1788394, Length=117, Percent_Identity=33.3333333333333, Blast_Score=69, Evalue=7e-13,
Organism=Escherichia coli, GI1786600, Length=226, Percent_Identity=26.1061946902655, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI1787229, Length=115, Percent_Identity=34.7826086956522, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI1790552, Length=117, Percent_Identity=39.3162393162393, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI1790437, Length=120, Percent_Identity=32.5, Blast_Score=67, Evalue=5e-12,
Organism=Escherichia coli, GI87082012, Length=115, Percent_Identity=31.304347826087, Blast_Score=64, Evalue=3e-11,
Organism=Escherichia coli, GI1786783, Length=224, Percent_Identity=25.4464285714286, Blast_Score=64, Evalue=4e-11,
Organism=Escherichia coli, GI1786599, Length=116, Percent_Identity=30.1724137931034, Blast_Score=62, Evalue=1e-10,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR011006
- InterPro:   IPR010559
- InterPro:   IPR001789 [H]

Pfam domain/function: PF02518 HATPase_c; PF06580 His_kinase [H]

EC number: 2.7.3.- [C]

Molecular weight: Translated: 68936; Mature: 68936

Theoretical pI: Translated: 5.65; Mature: 5.65

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEHRDQFLANMSEEFKNPLHGILNMSHSVLKRERHMLQERSIEELETVLSIGHRLTLRL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEEEH
NDLIDMMSLQEGSLRLQKKAVSIQPIVTGVLDMLQYSTEVKRIKMVNQIAKDFPPVIADE
HHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
SRLVQIVYNLLHNAVKYTDEGIISVRAFKENENALIVISDTGIGMDEDILKRLFRPYEQA
HHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCEEEEEECCCCCCCHHHHHHHHCHHHHC
NANETMIEGGFGLGLSISKQLVELHGGTLEVSSAVGEGSTFTLSLKLAELKNEQDKSGDP
CCCCEEEECCCCCCHHHHHHHHHHCCCEEEEEHHCCCCCEEEEEEEEHHHCCCCCCCCCC
AFEQSSSVVPPLEKKPLYMKEVEAQLATTQTSLSELSHARPRILMVDDDPAHLQVLEGIL
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHC
SPEDYDVTMVTSGKEALAMLDAQEWDLVISDTMMPQLSGYELTRLIRKRFTLIELPVLLL
CCCCCEEEEEECCHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
TSRSQSKDIQTGFLAGANDYVTKPVKALELRARIEALTTIKQMVQEQLRLEAAWLQAQIQ
CCCCCCCCCCHHEECCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PHFLFNALNAVAALSETALDKMHDLLQEFSDFLRAKFQFQNMDELVPIEEELSLVRSYLY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
IEKVRFEERLEIDWQVEDSDIKVPFLSIQPLVENAIRHGIMKRPHGGKVLIQVSNNKTHA
HHHHHHHHHCCEEEEECCCCEEEEEEEHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEE
VVSVEDDGVGMDDVQQQRILERKAASRSGVGLINTDQRLKRHFGTGLQIESEKGKGTKIS
EEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHCCCCCEEECCCCCCCEEE
FHVKHRNRSK
EEEECCCCCC
>Mature Secondary Structure
MNEHRDQFLANMSEEFKNPLHGILNMSHSVLKRERHMLQERSIEELETVLSIGHRLTLRL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEEEH
NDLIDMMSLQEGSLRLQKKAVSIQPIVTGVLDMLQYSTEVKRIKMVNQIAKDFPPVIADE
HHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
SRLVQIVYNLLHNAVKYTDEGIISVRAFKENENALIVISDTGIGMDEDILKRLFRPYEQA
HHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCEEEEEECCCCCCCHHHHHHHHCHHHHC
NANETMIEGGFGLGLSISKQLVELHGGTLEVSSAVGEGSTFTLSLKLAELKNEQDKSGDP
CCCCEEEECCCCCCHHHHHHHHHHCCCEEEEEHHCCCCCEEEEEEEEHHHCCCCCCCCCC
AFEQSSSVVPPLEKKPLYMKEVEAQLATTQTSLSELSHARPRILMVDDDPAHLQVLEGIL
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHC
SPEDYDVTMVTSGKEALAMLDAQEWDLVISDTMMPQLSGYELTRLIRKRFTLIELPVLLL
CCCCCEEEEEECCHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
TSRSQSKDIQTGFLAGANDYVTKPVKALELRARIEALTTIKQMVQEQLRLEAAWLQAQIQ
CCCCCCCCCCHHEECCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PHFLFNALNAVAALSETALDKMHDLLQEFSDFLRAKFQFQNMDELVPIEEELSLVRSYLY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
IEKVRFEERLEIDWQVEDSDIKVPFLSIQPLVENAIRHGIMKRPHGGKVLIQVSNNKTHA
HHHHHHHHHCCEEEEECCCCEEEEEEEHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEE
VVSVEDDGVGMDDVQQQRILERKAASRSGVGLINTDQRLKRHFGTGLQIESEKGKGTKIS
EEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHCCCCCEEECCCCCCCEEE
FHVKHRNRSK
EEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Transferring phosphorus-containing groups [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]