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The map label for this gene is cwlJ [H]

Identifier: 56965678

GI number: 56965678

Start: 4077936

End: 4078367

Strand: Direct

Name: cwlJ [H]

Synonym: ABC3920

Alternate gene names: 56965678

Gene position: 4077936-4078367 (Clockwise)

Preceding gene: 56965670

Following gene: 56965679

Centisome position: 94.75

GC content: 51.62

Gene sequence:

>432_bases
TTGGCTGTTATTCAAGCATCAACCAATGATATTGATATGCTGGCCCGTCTAATAAGAGCAGAGGCAGAAGGTGAAGGCGA
AGAAGGCATGCTGATGGCAGGAAATGTGATGGTCAACCGTGTCCGCGTCGACTGTCTTGATTTCTCAAATGTAAGAACAA
TTCCGCAAATGGCGTTCCAATCCCCTGGTGGATTTGAGGCGGTTCAGAAAAGCTATTTTTATCAAAGGGCACGAGAACGG
GAACGGCGCTTGGCGCGGCGGCTCGTAAACGGGGAAAGAACCCACCCAGCCAGCTTTTCGCTCTGGTTTTTCCGGCCTGA
AGGCGCCTGTCCGGCGCAATGGTGGGGGCAATGGAATGCCGGGCGTTTCAAAAACCACTGTTTTTACCAGCCGCTCGAAG
CAGAGTGCGCCGAAGTGTTTAGCACATTTTAA

Upstream 100 bases:

>100_bases
GACTCGATTTAAGCATAAACCCCGTTTTTTAAGCTTTTCTTATTGTTGGCAGATCGATCCGTTCACCAACTTGCGTGCAT
TCATAAGTGGAGGTGTCAAA

Downstream 100 bases:

>100_bases
GGATAGAAAGGGTGGCAAACATGTATTCATACGATGAGAATGAAGCCAATCGCCAGCAACAAGGATACGGCCAATATGGA
GGCCAAGGGCAAGGGCAACA

Product: cell wall hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 142

Protein sequence:

>143_residues
MAVIQASTNDIDMLARLIRAEAEGEGEEGMLMAGNVMVNRVRVDCLDFSNVRTIPQMAFQSPGGFEAVQKSYFYQRARER
ERRLARRLVNGERTHPASFSLWFFRPEGACPAQWWGQWNAGRFKNHCFYQPLEAECAEVFSTF

Sequences:

>Translated_143_residues
MAVIQASTNDIDMLARLIRAEAEGEGEEGMLMAGNVMVNRVRVDCLDFSNVRTIPQMAFQSPGGFEAVQKSYFYQRARER
ERRLARRLVNGERTHPASFSLWFFRPEGACPAQWWGQWNAGRFKNHCFYQPLEAECAEVFSTF
>Mature_142_residues
AVIQASTNDIDMLARLIRAEAEGEGEEGMLMAGNVMVNRVRVDCLDFSNVRTIPQMAFQSPGGFEAVQKSYFYQRARERE
RRLARRLVNGERTHPASFSLWFFRPEGACPAQWWGQWNAGRFKNHCFYQPLEAECAEVFSTF

Specific function: Probable spore cortex-lytic enzyme involved in the depolymerization of cortex peptidoglycan during germination [H]

COG id: COG3773

COG function: function code M; Cell wall hydrolyses involved in spore germination

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CwlJ family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011105 [H]

Pfam domain/function: PF07486 Hydrolase_2 [H]

EC number: NA

Molecular weight: Translated: 16462; Mature: 16331

Theoretical pI: Translated: 7.30; Mature: 7.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVIQASTNDIDMLARLIRAEAEGEGEEGMLMAGNVMVNRVRVDCLDFSNVRTIPQMAFQ
CEEEECCCCCHHHHHHHHHHHCCCCCCCCEEEECCEEEEHEEEEEECCCCCCHHHHHHHC
SPGGFEAVQKSYFYQRARERERRLARRLVNGERTHPASFSLWFFRPEGACPAQWWGQWNA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCHHHCCCCCC
GRFKNHCFYQPLEAECAEVFSTF
CCCCCCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
AVIQASTNDIDMLARLIRAEAEGEGEEGMLMAGNVMVNRVRVDCLDFSNVRTIPQMAFQ
EEEECCCCCHHHHHHHHHHHCCCCCCCCEEEECCEEEEHEEEEEECCCCCCHHHHHHHC
SPGGFEAVQKSYFYQRARERERRLARRLVNGERTHPASFSLWFFRPEGACPAQWWGQWNA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCHHHCCCCCC
GRFKNHCFYQPLEAECAEVFSTF
CCCCCCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]