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The map label for this gene is yhcS [H]

Identifier: 56965662

GI number: 56965662

Start: 4063584

End: 4064267

Strand: Direct

Name: yhcS [H]

Synonym: ABC3904

Alternate gene names: 56965662

Gene position: 4063584-4064267 (Clockwise)

Preceding gene: 56965661

Following gene: 56965663

Centisome position: 94.42

GC content: 49.42

Gene sequence:

>684_bases
GTGGCTCTTCGTAAATCAAATGGAAAGCAGGGCCGTTTCAAAAAAACAGCTCTGCTTTTCGTCGCCGCCGCCTTTATTGC
TTTCGGACTTTGGTTGACAACAACGACAGGCTTTAAGCTGGCGTACGGTTACTTTCTCTATAAAATTGGGGCGCACAGCG
AAACGGAAACGGTCGCTGCCCCAGTTGAGGAGGCACCAGAAGCGATACCGGCCTACGAGAACGATCTCCAGGACGTTGCC
AGCTGGCAGCCAGAAATAGGCGAAGAGATGGGGACATTAACGATCCCAAAAATCGATGCGACCCTTCCGATTATTCACGG
GACAAATGAAGATGAACTGGATAAAGGCGTCGGCCACTTTGCCGACAGTGTTCTTCCTGGAGAAAAGGACAACTCCGTTT
TATCTGGACACCGTGATACCGTGTTCCGCAAACTAGGAGAAGTTGGCGAAGGGGATGAACTCATTGTCGAAACACGAAGT
GGCGTCTACACGTATAAGGTGCATACGGTACGGATCGTCGATGAAGATGACCGCACCGTCATTGTTCCGACGGAAGAAGC
ACAGCTGACCGTGATCACTTGTTATCCATTCGATTTTATTGGCGCTGCCCCGGATCGTTATGTGCTTGTCGCTGATTTAA
TCGATGAAGACGTTTATGAAACACTCGCTCTTTTTCCTAAATGA

Upstream 100 bases:

>100_bases
CGACAAACTATCCCCTTTATATGCTGATCGGCATCGGAATGTCCCTTGCTGGTGTCCTTATCTTCCGCCGCCTCCTTCGT
GAGAAGAAGGTCGCTTAAAA

Downstream 100 bases:

>100_bases
TCAAAACAGCCCCTTTCTTTTGGTATACTGAATGTATTCTCGAAAAGAAAGGGGCTTTTTTATGCCAATTGTCACCGTTC
AACTGCTTGAAGGCCGTACA

Product: sortase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 227; Mature: 226

Protein sequence:

>227_residues
MALRKSNGKQGRFKKTALLFVAAAFIAFGLWLTTTTGFKLAYGYFLYKIGAHSETETVAAPVEEAPEAIPAYENDLQDVA
SWQPEIGEEMGTLTIPKIDATLPIIHGTNEDELDKGVGHFADSVLPGEKDNSVLSGHRDTVFRKLGEVGEGDELIVETRS
GVYTYKVHTVRIVDEDDRTVIVPTEEAQLTVITCYPFDFIGAAPDRYVLVADLIDEDVYETLALFPK

Sequences:

>Translated_227_residues
MALRKSNGKQGRFKKTALLFVAAAFIAFGLWLTTTTGFKLAYGYFLYKIGAHSETETVAAPVEEAPEAIPAYENDLQDVA
SWQPEIGEEMGTLTIPKIDATLPIIHGTNEDELDKGVGHFADSVLPGEKDNSVLSGHRDTVFRKLGEVGEGDELIVETRS
GVYTYKVHTVRIVDEDDRTVIVPTEEAQLTVITCYPFDFIGAAPDRYVLVADLIDEDVYETLALFPK
>Mature_226_residues
ALRKSNGKQGRFKKTALLFVAAAFIAFGLWLTTTTGFKLAYGYFLYKIGAHSETETVAAPVEEAPEAIPAYENDLQDVAS
WQPEIGEEMGTLTIPKIDATLPIIHGTNEDELDKGVGHFADSVLPGEKDNSVLSGHRDTVFRKLGEVGEGDELIVETRSG
VYTYKVHTVRIVDEDDRTVIVPTEEAQLTVITCYPFDFIGAAPDRYVLVADLIDEDVYETLALFPK

Specific function: Unknown

COG id: COG3764

COG function: function code M; Sortase (surface protein transpeptidase)

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005754 [H]

Pfam domain/function: PF04203 Sortase [H]

EC number: NA

Molecular weight: Translated: 25003; Mature: 24872

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALRKSNGKQGRFKKTALLFVAAAFIAFGLWLTTTTGFKLAYGYFLYKIGAHSETETVAA
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHEEEECCCCCCCCEEC
PVEEAPEAIPAYENDLQDVASWQPEIGEEMGTLTIPKIDATLPIIHGTNEDELDKGVGHF
CHHHCCCCCCCCHHHHHHHHHCCCHHHHHCCCEEECCCCCEEEEEECCCHHHHHHHHHHH
ADSVLPGEKDNSVLSGHRDTVFRKLGEVGEGDELIVETRSGVYTYKVHTVRIVDEDDRTV
HHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCEEEEEEEEEEEEECCCCEE
IVPTEEAQLTVITCYPFDFIGAAPDRYVLVADLIDEDVYETLALFPK
EEECCCCEEEEEEECCHHHHCCCCCCEEEEHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
ALRKSNGKQGRFKKTALLFVAAAFIAFGLWLTTTTGFKLAYGYFLYKIGAHSETETVAA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHEEEECCCCCCCCEEC
PVEEAPEAIPAYENDLQDVASWQPEIGEEMGTLTIPKIDATLPIIHGTNEDELDKGVGHF
CHHHCCCCCCCCHHHHHHHHHCCCHHHHHCCCEEECCCCCEEEEEECCCHHHHHHHHHHH
ADSVLPGEKDNSVLSGHRDTVFRKLGEVGEGDELIVETRSGVYTYKVHTVRIVDEDDRTV
HHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCEEEEEEEEEEEEECCCCEE
IVPTEEAQLTVITCYPFDFIGAAPDRYVLVADLIDEDVYETLALFPK
EEECCCCEEEEEEECCHHHHCCCCCCEEEEHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969498; 9384377 [H]