Click here to switch to the map view.

The map label for this gene is licH [H]

Identifier: 56965431

GI number: 56965431

Start: 3826080

End: 3827396

Strand: Direct

Name: licH [H]

Synonym: ABC3669

Alternate gene names: 56965431

Gene position: 3826080-3827396 (Clockwise)

Preceding gene: 56965430

Following gene: 56965432

Centisome position: 88.9

GC content: 43.66

Gene sequence:

>1317_bases
TTGGGTAAGAAAGGCATTAAAATTGTAACGATTGGCGGGGGATCAAGTTATACACCTGAATTCGTTGAAGGATTAATAAA
ACGCCATAAAGAGCTTCCCGTTCGCGAACTGTGGCTAGTTGATATAGAAAAAGGAAAAGAAAAATTAGAGATTGTCGGAA
ACTTGGCGAAGCGAATGGTGAAAAAGGCGGGCCTGCCGATCACTATTTATACCACCTTTGACCGAAAAGAAGCATTGAAA
GACGCCGATTTTGTTACAACGCAAATGCGTGTTGGCTTATTAGAGGCTCGGATTAAAGACGAACGCATTCCTTTAAAACA
CGGGATGATCGGCCAGGAAACAAACGGGGCAGGTGGTTTATTTAAAGCACTCCGAACCATTCCCGTCTTATTAGAGATCG
CCGAACAAATGCACGAACTATGCCCAAATGCGTGGCTCATCAACTTTACCAACCCTGCTGGAATCGTCACAGAAGCGGTC
ATGAAATATAGTCAACACAAAAAAATCATCGGCGTCTGCAATGTACCGATCAACACGAAAATGACCATAGCGACATTATT
AGACGTCCCACCTGACCAACTGACGATTACATTTGCTGGGCTAAACCATATGTCCTACGGCCTTGACGTCCATGTAAACG
GTGAATCGAGATTGAATGACGTCATCGACTTAGTAACAGATCCCAATCATGAAGTAACAATGAAAAACATCATCCCACTC
CCTTGGGAGAAAGCGTTTATGAAGGCGCTTGGCTGCATACCGAGCCCGTATCATCGCTATTATTACAAAACGAACGAAAT
CTTACAAAAGGAATTGGAAGAGTTTAAACAAGGTAAGACACGCGCCGAAGTCGTTAAGCAATTAGAAGATGAATTGTTCG
AACTCTATAAAGATCCTGACCTTGACATAAAGCCACCACAGCTCGAAAAACGCGGAGGCGCCTATTACAGTGATGCTGCG
TGTAATTTAATTTCTTCCATTTACAACGATAAAGGGGATGTCCAAACACTCAACACCCGCAATGAAGGGGCGATTACCAA
TCTCCCTAACGATACAGTCGTTGAAGTTAACTGCGTTGTCACAAAGCAGGGGCCCATTCCATTAGCTATAGGGGAACTTC
CTTACTCGATCAATGGCCTCATCCAACAAATCAAATCATTTGAACTAGTAGCGATTGAAGCGGCCGTAACAGGTTCTTAT
GAACAAGCATTACTGGCTCTTTGCATCAACCCGCTAATTACGAGCGACGTAAAGGCAAAAGACATATTGGATGAGATGCT
AGAAGCGCACAAAACGGATTTGCCCCAATTCCAATAG

Upstream 100 bases:

>100_bases
ACAACGGACAAACGATTAAATAGACAAAGAATACGCATCGCCATTATTGTCGGCTTTGCTACGAGCGCACTAATGACGTT
TGTGTTTGGAGGCGATCTGC

Downstream 100 bases:

>100_bases
TTGTAACGATTCCCCCTTTCTCAGGCAAGGAGGATTTCACCTAACAACACTTTCCTTCTACAAGCCCCCTCCCTATAAAT
AACGTGCAGAACGCTGTGGT

Product: 6-phospho-beta-glucosidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 438; Mature: 437

Protein sequence:

>438_residues
MGKKGIKIVTIGGGSSYTPEFVEGLIKRHKELPVRELWLVDIEKGKEKLEIVGNLAKRMVKKAGLPITIYTTFDRKEALK
DADFVTTQMRVGLLEARIKDERIPLKHGMIGQETNGAGGLFKALRTIPVLLEIAEQMHELCPNAWLINFTNPAGIVTEAV
MKYSQHKKIIGVCNVPINTKMTIATLLDVPPDQLTITFAGLNHMSYGLDVHVNGESRLNDVIDLVTDPNHEVTMKNIIPL
PWEKAFMKALGCIPSPYHRYYYKTNEILQKELEEFKQGKTRAEVVKQLEDELFELYKDPDLDIKPPQLEKRGGAYYSDAA
CNLISSIYNDKGDVQTLNTRNEGAITNLPNDTVVEVNCVVTKQGPIPLAIGELPYSINGLIQQIKSFELVAIEAAVTGSY
EQALLALCINPLITSDVKAKDILDEMLEAHKTDLPQFQ

Sequences:

>Translated_438_residues
MGKKGIKIVTIGGGSSYTPEFVEGLIKRHKELPVRELWLVDIEKGKEKLEIVGNLAKRMVKKAGLPITIYTTFDRKEALK
DADFVTTQMRVGLLEARIKDERIPLKHGMIGQETNGAGGLFKALRTIPVLLEIAEQMHELCPNAWLINFTNPAGIVTEAV
MKYSQHKKIIGVCNVPINTKMTIATLLDVPPDQLTITFAGLNHMSYGLDVHVNGESRLNDVIDLVTDPNHEVTMKNIIPL
PWEKAFMKALGCIPSPYHRYYYKTNEILQKELEEFKQGKTRAEVVKQLEDELFELYKDPDLDIKPPQLEKRGGAYYSDAA
CNLISSIYNDKGDVQTLNTRNEGAITNLPNDTVVEVNCVVTKQGPIPLAIGELPYSINGLIQQIKSFELVAIEAAVTGSY
EQALLALCINPLITSDVKAKDILDEMLEAHKTDLPQFQ
>Mature_437_residues
GKKGIKIVTIGGGSSYTPEFVEGLIKRHKELPVRELWLVDIEKGKEKLEIVGNLAKRMVKKAGLPITIYTTFDRKEALKD
ADFVTTQMRVGLLEARIKDERIPLKHGMIGQETNGAGGLFKALRTIPVLLEIAEQMHELCPNAWLINFTNPAGIVTEAVM
KYSQHKKIIGVCNVPINTKMTIATLLDVPPDQLTITFAGLNHMSYGLDVHVNGESRLNDVIDLVTDPNHEVTMKNIIPLP
WEKAFMKALGCIPSPYHRYYYKTNEILQKELEEFKQGKTRAEVVKQLEDELFELYKDPDLDIKPPQLEKRGGAYYSDAAC
NLISSIYNDKGDVQTLNTRNEGAITNLPNDTVVEVNCVVTKQGPIPLAIGELPYSINGLIQQIKSFELVAIEAAVTGSYE
QALLALCINPLITSDVKAKDILDEMLEAHKTDLPQFQ

Specific function: Hydrolyzes phospho-beta-glucosides (Probable) [H]

COG id: COG1486

COG function: function code G; Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 4 family [H]

Homologues:

Organism=Escherichia coli, GI1788029, Length=435, Percent_Identity=51.9540229885057, Blast_Score=459, Evalue=1e-130,
Organism=Escherichia coli, GI1790560, Length=459, Percent_Identity=27.0152505446623, Blast_Score=145, Evalue=4e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019802
- InterPro:   IPR001088
- InterPro:   IPR022616
- InterPro:   IPR015955
- InterPro:   IPR016040 [H]

Pfam domain/function: PF02056 Glyco_hydro_4; PF11975 Glyco_hydro_4C [H]

EC number: =3.2.1.86 [H]

Molecular weight: Translated: 48864; Mature: 48733

Theoretical pI: Translated: 5.89; Mature: 5.89

Prosite motif: PS01324 GLYCOSYL_HYDROL_F4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKKGIKIVTIGGGSSYTPEFVEGLIKRHKELPVRELWLVDIEKGKEKLEIVGNLAKRMV
CCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCHHEEEEEHHCCHHHHHHHHHHHHHHH
KKAGLPITIYTTFDRKEALKDADFVTTQMRVGLLEARIKDERIPLKHGMIGQETNGAGGL
HHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCHHH
FKALRTIPVLLEIAEQMHELCPNAWLINFTNPAGIVTEAVMKYSQHKKIIGVCNVPINTK
HHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCCEEEEECCCCCCC
MTIATLLDVPPDQLTITFAGLNHMSYGLDVHVNGESRLNDVIDLVTDPNHEVTMKNIIPL
EEEEEECCCCCCCEEEEEECCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCEECCCCCCC
PWEKAFMKALGCIPSPYHRYYYKTNEILQKELEEFKQGKTRAEVVKQLEDELFELYKDPD
CHHHHHHHHHCCCCCHHHHHHEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCC
LDIKPPQLEKRGGAYYSDAACNLISSIYNDKGDVQTLNTRNEGAITNLPNDTVVEVNCVV
CCCCCCCHHHCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCEEEEEEEE
TKQGPIPLAIGELPYSINGLIQQIKSFELVAIEAAVTGSYEQALLALCINPLITSDVKAK
EECCCCCEEECCCCCHHHHHHHHHCCCEEEEEEEHHCCCHHHHHHHHHHHHHHCCCCHHH
DILDEMLEAHKTDLPQFQ
HHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
GKKGIKIVTIGGGSSYTPEFVEGLIKRHKELPVRELWLVDIEKGKEKLEIVGNLAKRMV
CCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCHHEEEEEHHCCHHHHHHHHHHHHHHH
KKAGLPITIYTTFDRKEALKDADFVTTQMRVGLLEARIKDERIPLKHGMIGQETNGAGGL
HHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCHHH
FKALRTIPVLLEIAEQMHELCPNAWLINFTNPAGIVTEAVMKYSQHKKIIGVCNVPINTK
HHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCCEEEEECCCCCCC
MTIATLLDVPPDQLTITFAGLNHMSYGLDVHVNGESRLNDVIDLVTDPNHEVTMKNIIPL
EEEEEECCCCCCCEEEEEECCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCEECCCCCCC
PWEKAFMKALGCIPSPYHRYYYKTNEILQKELEEFKQGKTRAEVVKQLEDELFELYKDPD
CHHHHHHHHHCCCCCHHHHHHEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCC
LDIKPPQLEKRGGAYYSDAACNLISSIYNDKGDVQTLNTRNEGAITNLPNDTVVEVNCVV
CCCCCCCHHHCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCEEEEEEEE
TKQGPIPLAIGELPYSINGLIQQIKSFELVAIEAAVTGSYEQALLALCINPLITSDVKAK
EECCCCCEEECCCCCHHHHHHHHHCCCEEEEEEEHHCCCHHHHHHHHHHHHHHCCCCHHH
DILDEMLEAHKTDLPQFQ
HHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8990303; 9384377; 8969509 [H]