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The map label for this gene is yrkO [H]

Identifier: 56965396

GI number: 56965396

Start: 3786993

End: 3788159

Strand: Direct

Name: yrkO [H]

Synonym: ABC3634

Alternate gene names: 56965396

Gene position: 3786993-3788159 (Clockwise)

Preceding gene: 56965393

Following gene: 56965398

Centisome position: 87.99

GC content: 46.62

Gene sequence:

>1167_bases
ATGAATCCTATCGCTCAGCTAGGACAAAAACGGTTTGTTTCACTTGATCTCGCTAGAGGTTTTATGCTTCTTCTTGTCGC
CCTCGCCCATGCATCGTTGTTTTTGGGCAGCTCCTTGTTAACCCGTCCCGAAAGTATGAGTATGTACGATACCATTGTCA
ATTATCTTTCTGTCTTTTTGGTTGATAACCGGGCGAGAGCGATGTTTGCGTTATTGTTTGGCTACGGCCTGACCTTGATT
GTGCGCAGTTACGTAAAACGAAACAAACCAATAAAAGAGGCAAAAACATCTCTTTACCGCAGGGCATGGTTTCCGATTTT
ATTTGGTTTCATCCTCTCCGTTCTGATCGGTGGAAAAGACATCCTCGCCATCTATGGGACTGCCCTTCTCGCGTGTTGTT
GGCTACTGTTCCGAAGCGACAAAACCGTACTTCGAAGCATCATGGCCTTATCCCTTGTTTATGTCGTCATTTTGCCGCTC
ACATGGATAGCGATGGCCTATGCACAATTTAATGGAAACACGATCCTTCCAGGCAATTACACACATTACTTCGAACGAGT
CACAAGCCAATTTATCCAATTTGCTACAGGCGGACCATTCATCGCTCATTTTCTGCTGCCTGTTGGGGTATCGATCCTTA
TAGGCATATGGGCTGGACGAAAAGGCTTGTTAAATGAAAGCCCAAAGAACAAACCATTCTTGAAAAAAGCGGCTGTTTAC
GGCCTTTCCATATCCTTGATCGGCGCTCTTCCCCACGCCTTATACAGCAACCAACTGATCGAGTTGCCGCCAGCCTTAGT
CGGCTTGACGTTCTCCTTGCATATGGCAACAGGCATTTTAGGGGGTGTTGCTTACGCCGCTATCTTTGGCTTAATAGGAC
CGAAAATAACAAACCCAAGCGGTATTGTATGGGCGATCACGTCCCTCGGAAAACGATCGCTTACGTTTTTTATCTACAAC
GAAATCATGTTAATTGTGCTGTTCTCAAAACAAACACTTAATCTAGGAAACCAACTAGGCATGGCTGCAGGCTGGGGACT
CACTCTCTGCATTTGTCTCACAGCCCTTGGCTGCGCCGCATGGCTCGAATCCAAACAAAAAAGCGGCCCAATTGACCACC
TGTTCCGTAAGCTCGTATACCGGAAATCATCTCCTCGTGCATCGTAG

Upstream 100 bases:

>100_bases
ATACTAGTAAGTTTTGACTCGCGATTCTACCAGTGCTATCATAAATTAAAACTTCCATAAAATGGAGGAAACCATCACGC
AAAAAGGAGAGAACGCACAA

Downstream 100 bases:

>100_bases
AAAAGCGGCCGTGTAGGCTGCTTTTTAAACAGGGAAAAATGCGGGTATTTCCCCAGAACCTACTTTCATTTTTAAAAATA
AAATGGCAACAACAGGTGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 388; Mature: 388

Protein sequence:

>388_residues
MNPIAQLGQKRFVSLDLARGFMLLLVALAHASLFLGSSLLTRPESMSMYDTIVNYLSVFLVDNRARAMFALLFGYGLTLI
VRSYVKRNKPIKEAKTSLYRRAWFPILFGFILSVLIGGKDILAIYGTALLACCWLLFRSDKTVLRSIMALSLVYVVILPL
TWIAMAYAQFNGNTILPGNYTHYFERVTSQFIQFATGGPFIAHFLLPVGVSILIGIWAGRKGLLNESPKNKPFLKKAAVY
GLSISLIGALPHALYSNQLIELPPALVGLTFSLHMATGILGGVAYAAIFGLIGPKITNPSGIVWAITSLGKRSLTFFIYN
EIMLIVLFSKQTLNLGNQLGMAAGWGLTLCICLTALGCAAWLESKQKSGPIDHLFRKLVYRKSSPRAS

Sequences:

>Translated_388_residues
MNPIAQLGQKRFVSLDLARGFMLLLVALAHASLFLGSSLLTRPESMSMYDTIVNYLSVFLVDNRARAMFALLFGYGLTLI
VRSYVKRNKPIKEAKTSLYRRAWFPILFGFILSVLIGGKDILAIYGTALLACCWLLFRSDKTVLRSIMALSLVYVVILPL
TWIAMAYAQFNGNTILPGNYTHYFERVTSQFIQFATGGPFIAHFLLPVGVSILIGIWAGRKGLLNESPKNKPFLKKAAVY
GLSISLIGALPHALYSNQLIELPPALVGLTFSLHMATGILGGVAYAAIFGLIGPKITNPSGIVWAITSLGKRSLTFFIYN
EIMLIVLFSKQTLNLGNQLGMAAGWGLTLCICLTALGCAAWLESKQKSGPIDHLFRKLVYRKSSPRAS
>Mature_388_residues
MNPIAQLGQKRFVSLDLARGFMLLLVALAHASLFLGSSLLTRPESMSMYDTIVNYLSVFLVDNRARAMFALLFGYGLTLI
VRSYVKRNKPIKEAKTSLYRRAWFPILFGFILSVLIGGKDILAIYGTALLACCWLLFRSDKTVLRSIMALSLVYVVILPL
TWIAMAYAQFNGNTILPGNYTHYFERVTSQFIQFATGGPFIAHFLLPVGVSILIGIWAGRKGLLNESPKNKPFLKKAAVY
GLSISLIGALPHALYSNQLIELPPALVGLTFSLHMATGILGGVAYAAIFGLIGPKITNPSGIVWAITSLGKRSLTFFIYN
EIMLIVLFSKQTLNLGNQLGMAAGWGLTLCICLTALGCAAWLESKQKSGPIDHLFRKLVYRKSSPRAS

Specific function: Involved in transport (Potential) [H]

COG id: COG2311

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007349 [H]

Pfam domain/function: PF04235 DUF418 [H]

EC number: NA

Molecular weight: Translated: 42611; Mature: 42611

Theoretical pI: Translated: 10.49; Mature: 10.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPIAQLGQKRFVSLDLARGFMLLLVALAHASLFLGSSLLTRPESMSMYDTIVNYLSVFL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
VDNRARAMFALLFGYGLTLIVRSYVKRNKPIKEAKTSLYRRAWFPILFGFILSVLIGGKD
HCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
ILAIYGTALLACCWLLFRSDKTVLRSIMALSLVYVVILPLTWIAMAYAQFNGNTILPGNY
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCH
THYFERVTSQFIQFATGGPFIAHFLLPVGVSILIGIWAGRKGLLNESPKNKPFLKKAAVY
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH
GLSISLIGALPHALYSNQLIELPPALVGLTFSLHMATGILGGVAYAAIFGLIGPKITNPS
HHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
GIVWAITSLGKRSLTFFIYNEIMLIVLFSKQTLNLGNQLGMAAGWGLTLCICLTALGCAA
CCEEEHHHCCCHHHHHHHHHHHHHHHHCCCHHHCCCHHCCCCCCHHHHHHHHHHHHHHHH
WLESKQKSGPIDHLFRKLVYRKSSPRAS
HHHHHCCCCCHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MNPIAQLGQKRFVSLDLARGFMLLLVALAHASLFLGSSLLTRPESMSMYDTIVNYLSVFL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
VDNRARAMFALLFGYGLTLIVRSYVKRNKPIKEAKTSLYRRAWFPILFGFILSVLIGGKD
HCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
ILAIYGTALLACCWLLFRSDKTVLRSIMALSLVYVVILPLTWIAMAYAQFNGNTILPGNY
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCH
THYFERVTSQFIQFATGGPFIAHFLLPVGVSILIGIWAGRKGLLNESPKNKPFLKKAAVY
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH
GLSISLIGALPHALYSNQLIELPPALVGLTFSLHMATGILGGVAYAAIFGLIGPKITNPS
HHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
GIVWAITSLGKRSLTFFIYNEIMLIVLFSKQTLNLGNQLGMAAGWGLTLCICLTALGCAA
CCEEEHHHCCCHHHHHHHHHHHHHHHHCCCHHHCCCHHCCCCCCHHHHHHHHHHHHHHHH
WLESKQKSGPIDHLFRKLVYRKSSPRAS
HHHHHCCCCCHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]