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The map label for this gene is 56965325

Identifier: 56965325

GI number: 56965325

Start: 3711126

End: 3711464

Strand: Direct

Name: 56965325

Synonym: ABC3563

Alternate gene names: NA

Gene position: 3711126-3711464 (Clockwise)

Preceding gene: 56965324

Following gene: 56965326

Centisome position: 86.23

GC content: 42.77

Gene sequence:

>339_bases
ATGGCTGAACTGAATGACCGCTTACGAGAGCTGCGGAAAGCTCACCAGCTAACGCAACAAGAAGTCGCTTCGTTCCTTGG
CATTACGGAAAGTGCATACGGTTTTTACGAACAAGGCCGCAACGAACCTTCGATTGCCAAATTAAAGCAGCTCGCCGAGA
AATATAATGTTTCCATTGCGTATATTGCGGGAGAGACAGATATCAAAACTGCCCCGTCCGACAAAGTAAAAGAAAACGGC
TCTGCTTATACGTTTACGAATTTAGATGAGGAAGAAAAAGAATTTTTAGGTGAACAGCTCGAATTATTTCGCAGGCTTAA
AAAGAAAAAAGGCCATTAA

Upstream 100 bases:

>100_bases
GTGTTTTACCCAATTTTACAGAGTGTTCATGTTCGTTTTGTTCCTTTACCCAACTTTTAGTTGTATAATTGTGACAATAA
CAAATAGGAAGGATTTGTTT

Downstream 100 bases:

>100_bases
TGCTGATCCAGTACGGATAAAAGCGCTTAACAGCTCGTTCATCAGCAATGAGCAGGCTAACGCGTTTCCAGGATCAACGC
CTGTCTGTTCGCTGCTTCTT

Product: transcriptional regulator

Products: NA

Alternate protein names: XRE Family Transcriptional Regulator; Helix-Turn-Helix Domain Protein

Number of amino acids: Translated: 112; Mature: 111

Protein sequence:

>112_residues
MAELNDRLRELRKAHQLTQQEVASFLGITESAYGFYEQGRNEPSIAKLKQLAEKYNVSIAYIAGETDIKTAPSDKVKENG
SAYTFTNLDEEEKEFLGEQLELFRRLKKKKGH

Sequences:

>Translated_112_residues
MAELNDRLRELRKAHQLTQQEVASFLGITESAYGFYEQGRNEPSIAKLKQLAEKYNVSIAYIAGETDIKTAPSDKVKENG
SAYTFTNLDEEEKEFLGEQLELFRRLKKKKGH
>Mature_111_residues
AELNDRLRELRKAHQLTQQEVASFLGITESAYGFYEQGRNEPSIAKLKQLAEKYNVSIAYIAGETDIKTAPSDKVKENGS
AYTFTNLDEEEKEFLGEQLELFRRLKKKKGH

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12842; Mature: 12710

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAELNDRLRELRKAHQLTQQEVASFLGITESAYGFYEQGRNEPSIAKLKQLAEKYNVSIA
CCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCEEE
YIAGETDIKTAPSDKVKENGSAYTFTNLDEEEKEFLGEQLELFRRLKKKKGH
EEECCCCCCCCCCHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AELNDRLRELRKAHQLTQQEVASFLGITESAYGFYEQGRNEPSIAKLKQLAEKYNVSIA
CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCEEE
YIAGETDIKTAPSDKVKENGSAYTFTNLDEEEKEFLGEQLELFRRLKKKKGH
EEECCCCCCCCCCHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA