| Definition | Bacillus clausii KSM-K16, complete genome. |
|---|---|
| Accession | NC_006582 |
| Length | 4,303,871 |
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The map label for this gene is yflN [H]
Identifier: 56965176
GI number: 56965176
Start: 3539914
End: 3540771
Strand: Direct
Name: yflN [H]
Synonym: ABC3414
Alternate gene names: 56965176
Gene position: 3539914-3540771 (Clockwise)
Preceding gene: 56965175
Following gene: 56965177
Centisome position: 82.25
GC content: 48.48
Gene sequence:
>858_bases ATGGATATCGTTGACTGGAATCATACTGCCCCGAATACGATCAAACTGCCGATGACTTCGGCAACGAGCGGGCTTATGCA AAAAGTGACAGAAAAACTTTTCTGTTTAACAACACAAATTGTCAATGTTTGTTTTATCGGGGACCCTACAAAAGCACATG GCTGGGTGTTAATTGATACAGGCATGCCTGGAAAAAGCGACATGATTACAGAGGCGCTCATCAAGCAATTTGGCGAAAGC AACCCGCCATCAGCGATTCTATTAACACATGGCCATTTTGACCACGTAGGCGGCGCTTTTGATTTAGCACAAAATTGGGA TGTCCCTATCTACATTCATCCCGACGAGCTGCCTTATGTAACAGGGGAAAAAGCTTATCCGAAACCGGATGCCACTGTCG AAGGAGGGTTAGTAGCCAAGCTATCCCGCTTCTTTCCAAATGAACCGATCCAGCTTGACGACTATGTTAAGCCACTCCCA GACAAACTTGATTTCGCAGGACTTGAGAATGAATGGACATGGCTACACGTACCCGGGCATTCCCCTGGCCAAGTTGCCTT TTTCCGTGAGCGGGACAAAGCTTTGCTATCAGCAGATGCGATTATTACTGTGAAGCAAGACGAGTTATTTGACGTCATCA CCCAAAATCAACAAATTCAAGGTCCGCCCCGCTACTGGACCACCGATTGGACAGCGGCACATCGCTCCGTCCAAAAGCTC CGGTCATTAGATCCAGCCGTCCTCGTTCCTGGCCATGGATTGCCTCTTTTCGGCCAAGAGCTTCGCGACAGCCTCGCTGT CCTTGACCAGCAATTTGAACGCATCGCTGTTCCTGATTATGGGAAGTATGTGCAGTGA
Upstream 100 bases:
>100_bases GGCAGACCATGACTAGATACGCTGGGTTTACCTCCAGTCTGATACATGGTTTTTGTTTTCTTGTACACACTAGAGGCATC ACAATTGTGGAGGGAAAGCA
Downstream 100 bases:
>100_bases CTTAGGGGCTCCCGCGTCTGGCAATACGCATTGCCGGACGCTTTTTTTTGTCATTTCCAAAGAGCCATTTCTGTTTAAAA TTTTCTGTACCGGGTAGGTA
Product: metal-dependent hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 285; Mature: 285
Protein sequence:
>285_residues MDIVDWNHTAPNTIKLPMTSATSGLMQKVTEKLFCLTTQIVNVCFIGDPTKAHGWVLIDTGMPGKSDMITEALIKQFGES NPPSAILLTHGHFDHVGGAFDLAQNWDVPIYIHPDELPYVTGEKAYPKPDATVEGGLVAKLSRFFPNEPIQLDDYVKPLP DKLDFAGLENEWTWLHVPGHSPGQVAFFRERDKALLSADAIITVKQDELFDVITQNQQIQGPPRYWTTDWTAAHRSVQKL RSLDPAVLVPGHGLPLFGQELRDSLAVLDQQFERIAVPDYGKYVQ
Sequences:
>Translated_285_residues MDIVDWNHTAPNTIKLPMTSATSGLMQKVTEKLFCLTTQIVNVCFIGDPTKAHGWVLIDTGMPGKSDMITEALIKQFGES NPPSAILLTHGHFDHVGGAFDLAQNWDVPIYIHPDELPYVTGEKAYPKPDATVEGGLVAKLSRFFPNEPIQLDDYVKPLP DKLDFAGLENEWTWLHVPGHSPGQVAFFRERDKALLSADAIITVKQDELFDVITQNQQIQGPPRYWTTDWTAAHRSVQKL RSLDPAVLVPGHGLPLFGQELRDSLAVLDQQFERIAVPDYGKYVQ >Mature_285_residues MDIVDWNHTAPNTIKLPMTSATSGLMQKVTEKLFCLTTQIVNVCFIGDPTKAHGWVLIDTGMPGKSDMITEALIKQFGES NPPSAILLTHGHFDHVGGAFDLAQNWDVPIYIHPDELPYVTGEKAYPKPDATVEGGLVAKLSRFFPNEPIQLDDYVKPLP DKLDFAGLENEWTWLHVPGHSPGQVAFFRERDKALLSADAIITVKQDELFDVITQNQQIQGPPRYWTTDWTAAHRSVQKL RSLDPAVLVPGHGLPLFGQELRDSLAVLDQQFERIAVPDYGKYVQ
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001279 [H]
Pfam domain/function: PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 31807; Mature: 31807
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIVDWNHTAPNTIKLPMTSATSGLMQKVTEKLFCLTTQIVNVCFIGDPTKAHGWVLIDT CCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCEEEEEC GMPGKSDMITEALIKQFGESNPPSAILLTHGHFDHVGGAFDLAQNWDVPIYIHPDELPYV CCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCHHCCCHHHHCCCCCEEEEECCCCCCEE TGEKAYPKPDATVEGGLVAKLSRFFPNEPIQLDDYVKPLPDKLDFAGLENEWTWLHVPGH CCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCEEEEECCCC SPGQVAFFRERDKALLSADAIITVKQDELFDVITQNQQIQGPPRYWTTDWTAAHRSVQKL CCCCEEEEEHHCHHHEECCEEEEEEHHHHHHHHHCCCCCCCCCCEECCCHHHHHHHHHHH RSLDPAVLVPGHGLPLFGQELRDSLAVLDQQFERIAVPDYGKYVQ HCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHEECCCCCCCCCC >Mature Secondary Structure MDIVDWNHTAPNTIKLPMTSATSGLMQKVTEKLFCLTTQIVNVCFIGDPTKAHGWVLIDT CCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCEEEEEC GMPGKSDMITEALIKQFGESNPPSAILLTHGHFDHVGGAFDLAQNWDVPIYIHPDELPYV CCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCHHCCCHHHHCCCCCEEEEECCCCCCEE TGEKAYPKPDATVEGGLVAKLSRFFPNEPIQLDDYVKPLPDKLDFAGLENEWTWLHVPGH CCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCEEEEECCCC SPGQVAFFRERDKALLSADAIITVKQDELFDVITQNQQIQGPPRYWTTDWTAAHRSVQKL CCCCEEEEEHHCHHHEECCEEEEEEHHHHHHHHHCCCCCCCCCCEECCCHHHHHHHHHHH RSLDPAVLVPGHGLPLFGQELRDSLAVLDQQFERIAVPDYGKYVQ HCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9272861; 9384377; 10972810; 11029430 [H]