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The map label for this gene is phnW [H]

Identifier: 56965054

GI number: 56965054

Start: 3417615

End: 3419228

Strand: Direct

Name: phnW [H]

Synonym: ABC3292

Alternate gene names: 56965054

Gene position: 3417615-3419228 (Clockwise)

Preceding gene: 56965053

Following gene: 56965055

Centisome position: 79.41

GC content: 46.41

Gene sequence:

>1614_bases
ATGGACACATCTGCCATTACATACAAGATTGCTGATTTAGATGAAGAATTCGATCAAATTCATACGCTAAATTACGACAC
ATTTGTCGAAGAGATCCCACAGCATCGCCCAAATACAGATAAGAGGCTCATTGACCGCTTTAATGACGAAAACATATATA
TAATTGCCAAGCGCGGCCAAGAAATTATCGGCATGATTTCCGTTCGCGACACGCGCCCATTTTCGTTAGACAGTAAATTA
GAGAACCTTGACTCTTACATAAACAGCGATGAAAAGCTATGCGAAATTAGGCTGCTTTCCATTAAACAAGCATACCGCAA
AGGGGTTGTTTTTTACCGCCTCTGCGAGCAACTCGTTTCTTATTGTCTAAAACAAGGATATACGATGGCCCTTATCTCAG
GTACAACACGGCAATTAAAGCTTTATAAGCGGATTGGCTTTGTGCCGTTTGGACCCCTTGTCGGGTCTGGGGAAGCCCGT
TACCAACCGATGTATTTAACAGAAGAAAATTTTAAAGCTTCAACCAAAGCGTTTCAAAAGTTAATGGAACGGCAGCAAGC
GCCTGTCCAGCAGTTGTTTTTGCCGGGGCCCGTCACACAACTGAAAGCCGTGCAAGAGGCTTGGGCAAAGGCTCCTGTAT
CCCACCGGGCCGAAGAATTCCATCACGCGATGGCACAAACGAAAGAAAAGTTGCTCCAGCTAACAAATGGCCGTTATGTG
GAACTTGCGGTCGGGACAGGGACACTTGCCAATGAGATGGTAGCAGCTCAACTGTCAACGCTACATCAAAAAGGTGTCAT
TCTCACAAGCGGTGAATTTGGCGAGCGGTTAGTCAAACAAGCAGAGCGGTGGGGATTATCATTTGACCAATTGGCCCATT
CCCAAACTGGCCCGGTCCCTTACGAAAACATTGAGAAATGGCTAGAGGCCGATTCTGAGATTGGCTGGCTTTGGACTGTC
CATTGTGAAACGTCGACGGGCCGCCTTTATGCTCTTGACCGCCTTAAAGAGATTTGCAGCAAACATGGCGTTCGTTTATG
CCTTGACGCATGCAGCAGCATCGGCTCTGTTCCAGTTGACTTATCTGGCGTCTGGCTTGCTAGTTCAGTCAGCGGCAAAG
GATTAGCAGCTTATCCCGGACTTGCCCTTGTCTTCCATGACGAGCCAGCTTTCGCCAATGATTCGTTGCCTGCCTACCTT
GACATTGGCACATATGAACAAGCAGAAAGTGTACCGTTTACCCATTGTTCAAATGGCTTGTATGCATTAAATGAAGCACT
AAACCATCCGGCTCCGCCATATGTTTCTTTATGTGAGTCCATATTGGCTATACTAGAAGCGAATGGCTTTACAGTAGTGC
GCGGCGAGTCTTTTTCTCCTGCTATCATTACAGTTGACCTTTCTGGCCACTTGTCCGCAAGGGCATTTGGTGACCGTCTC
AAACAACACGGCATTCATGTCAGTTATGAAAGCGCCTATTTACTTGAACGCAATTGGTTCCAGCTAGCATTAATGGGCCA
CATCGACGCTCGCCTTGCCAAAAAAGCAGTTCAAACCATTGCTACTATTTATGCAAAAATGAAACAAGAACAGGCGGTCC
ACAGTTATGAATGA

Upstream 100 bases:

>100_bases
ATCCCACTCACATTGCTTTGCCAAACTGCATACAGCCTTGCTGGCTTGTTTGCACTTTTGCTCATGATTGTGCTAGTTGC
TCACAGAAAGGGGCATTGAG

Downstream 100 bases:

>100_bases
ACTTAAACATTTTTTAGCAAAACATCTTATTCCTTTAGGTGTTGTTGTACTTTGGTTGAAAACCGTGATTGTGTCGGCAA
CGGCTTTTTCGCTGCCTATC

Product: serine--pyruvate aminotransferase

Products: NA

Alternate protein names: 2-aminoethylphosphonate aminotransferase; AEP transaminase; AEPT [H]

Number of amino acids: Translated: 537; Mature: 537

Protein sequence:

>537_residues
MDTSAITYKIADLDEEFDQIHTLNYDTFVEEIPQHRPNTDKRLIDRFNDENIYIIAKRGQEIIGMISVRDTRPFSLDSKL
ENLDSYINSDEKLCEIRLLSIKQAYRKGVVFYRLCEQLVSYCLKQGYTMALISGTTRQLKLYKRIGFVPFGPLVGSGEAR
YQPMYLTEENFKASTKAFQKLMERQQAPVQQLFLPGPVTQLKAVQEAWAKAPVSHRAEEFHHAMAQTKEKLLQLTNGRYV
ELAVGTGTLANEMVAAQLSTLHQKGVILTSGEFGERLVKQAERWGLSFDQLAHSQTGPVPYENIEKWLEADSEIGWLWTV
HCETSTGRLYALDRLKEICSKHGVRLCLDACSSIGSVPVDLSGVWLASSVSGKGLAAYPGLALVFHDEPAFANDSLPAYL
DIGTYEQAESVPFTHCSNGLYALNEALNHPAPPYVSLCESILAILEANGFTVVRGESFSPAIITVDLSGHLSARAFGDRL
KQHGIHVSYESAYLLERNWFQLALMGHIDARLAKKAVQTIATIYAKMKQEQAVHSYE

Sequences:

>Translated_537_residues
MDTSAITYKIADLDEEFDQIHTLNYDTFVEEIPQHRPNTDKRLIDRFNDENIYIIAKRGQEIIGMISVRDTRPFSLDSKL
ENLDSYINSDEKLCEIRLLSIKQAYRKGVVFYRLCEQLVSYCLKQGYTMALISGTTRQLKLYKRIGFVPFGPLVGSGEAR
YQPMYLTEENFKASTKAFQKLMERQQAPVQQLFLPGPVTQLKAVQEAWAKAPVSHRAEEFHHAMAQTKEKLLQLTNGRYV
ELAVGTGTLANEMVAAQLSTLHQKGVILTSGEFGERLVKQAERWGLSFDQLAHSQTGPVPYENIEKWLEADSEIGWLWTV
HCETSTGRLYALDRLKEICSKHGVRLCLDACSSIGSVPVDLSGVWLASSVSGKGLAAYPGLALVFHDEPAFANDSLPAYL
DIGTYEQAESVPFTHCSNGLYALNEALNHPAPPYVSLCESILAILEANGFTVVRGESFSPAIITVDLSGHLSARAFGDRL
KQHGIHVSYESAYLLERNWFQLALMGHIDARLAKKAVQTIATIYAKMKQEQAVHSYE
>Mature_537_residues
MDTSAITYKIADLDEEFDQIHTLNYDTFVEEIPQHRPNTDKRLIDRFNDENIYIIAKRGQEIIGMISVRDTRPFSLDSKL
ENLDSYINSDEKLCEIRLLSIKQAYRKGVVFYRLCEQLVSYCLKQGYTMALISGTTRQLKLYKRIGFVPFGPLVGSGEAR
YQPMYLTEENFKASTKAFQKLMERQQAPVQQLFLPGPVTQLKAVQEAWAKAPVSHRAEEFHHAMAQTKEKLLQLTNGRYV
ELAVGTGTLANEMVAAQLSTLHQKGVILTSGEFGERLVKQAERWGLSFDQLAHSQTGPVPYENIEKWLEADSEIGWLWTV
HCETSTGRLYALDRLKEICSKHGVRLCLDACSSIGSVPVDLSGVWLASSVSGKGLAAYPGLALVFHDEPAFANDSLPAYL
DIGTYEQAESVPFTHCSNGLYALNEALNHPAPPYVSLCESILAILEANGFTVVRGESFSPAIITVDLSGHLSARAFGDRL
KQHGIHVSYESAYLLERNWFQLALMGHIDARLAKKAVQTIATIYAKMKQEQAVHSYE

Specific function: Involved in phosphonate degradation [H]

COG id: COG0075

COG function: function code E; Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. PhnW subfamily [H]

Homologues:

Organism=Caenorhabditis elegans, GI17536281, Length=214, Percent_Identity=28.0373831775701, Blast_Score=79, Evalue=6e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017688
- InterPro:   IPR000192
- InterPro:   IPR012703
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00266 Aminotran_5 [H]

EC number: =2.6.1.37 [H]

Molecular weight: Translated: 60136; Mature: 60136

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTSAITYKIADLDEEFDQIHTLNYDTFVEEIPQHRPNTDKRLIDRFNDENIYIIAKRGQ
CCCCEEEEEECCCHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHCCCCCEEEEEECCC
EIIGMISVRDTRPFSLDSKLENLDSYINSDEKLCEIRLLSIKQAYRKGVVFYRLCEQLVS
EEEEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
YCLKQGYTMALISGTTRQLKLYKRIGFVPFGPLVGSGEARYQPMYLTEENFKASTKAFQK
HHHHCCCEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHH
LMERQQAPVQQLFLPGPVTQLKAVQEAWAKAPVSHRAEEFHHAMAQTKEKLLQLTNGRYV
HHHHHCCCHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCEE
ELAVGTGTLANEMVAAQLSTLHQKGVILTSGEFGERLVKQAERWGLSFDQLAHSQTGPVP
EEEECCCHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHCCCHHHHHCCCCCCCC
YENIEKWLEADSEIGWLWTVHCETSTGRLYALDRLKEICSKHGVRLCLDACSSIGSVPVD
HHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCC
LSGVWLASSVSGKGLAAYPGLALVFHDEPAFANDSLPAYLDIGTYEQAESVPFTHCSNGL
CCCEEEEECCCCCCEEECCCEEEEEECCCCCCCCCCCEEEECCCCHHHCCCCCHHCCCCH
YALNEALNHPAPPYVSLCESILAILEANGFTVVRGESFSPAIITVDLSGHLSARAFGDRL
HHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEEEECCCCHHHHHHHHH
KQHGIHVSYESAYLLERNWFQLALMGHIDARLAKKAVQTIATIYAKMKQEQAVHSYE
HHCCCEEEECCEEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDTSAITYKIADLDEEFDQIHTLNYDTFVEEIPQHRPNTDKRLIDRFNDENIYIIAKRGQ
CCCCEEEEEECCCHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHCCCCCEEEEEECCC
EIIGMISVRDTRPFSLDSKLENLDSYINSDEKLCEIRLLSIKQAYRKGVVFYRLCEQLVS
EEEEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
YCLKQGYTMALISGTTRQLKLYKRIGFVPFGPLVGSGEARYQPMYLTEENFKASTKAFQK
HHHHCCCEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHH
LMERQQAPVQQLFLPGPVTQLKAVQEAWAKAPVSHRAEEFHHAMAQTKEKLLQLTNGRYV
HHHHHCCCHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCEE
ELAVGTGTLANEMVAAQLSTLHQKGVILTSGEFGERLVKQAERWGLSFDQLAHSQTGPVP
EEEECCCHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHCCCHHHHHCCCCCCCC
YENIEKWLEADSEIGWLWTVHCETSTGRLYALDRLKEICSKHGVRLCLDACSSIGSVPVD
HHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCC
LSGVWLASSVSGKGLAAYPGLALVFHDEPAFANDSLPAYLDIGTYEQAESVPFTHCSNGL
CCCEEEEECCCCCCEEECCCEEEEEECCCCCCCCCCCEEEECCCCHHHCCCCCHHCCCCH
YALNEALNHPAPPYVSLCESILAILEANGFTVVRGESFSPAIITVDLSGHLSARAFGDRL
HHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEEEECCCCHHHHHHHHH
KQHGIHVSYESAYLLERNWFQLALMGHIDARLAKKAVQTIATIYAKMKQEQAVHSYE
HHCCCEEEECCEEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA