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The map label for this gene is yvcP [H]

Identifier: 56964991

GI number: 56964991

Start: 3350182

End: 3350892

Strand: Direct

Name: yvcP [H]

Synonym: ABC3227

Alternate gene names: 56964991

Gene position: 3350182-3350892 (Clockwise)

Preceding gene: 56964984

Following gene: 56964992

Centisome position: 77.84

GC content: 45.43

Gene sequence:

>711_bases
ATGTACCATATTTATATAGTCGAGGATGACCAGCAAATTCGCCGGATTATGGCTGACCATTTAGAACGGTACGGCTATCG
AGTTACATGGGCGGAGAATTTCGAAACGATTAAACAGGAATTTGTGGCGATTCAGCCTGATCTTGTCTTACTCGATATTA
ATTTGCCCCTTTATGATGGCTTTTATTGGTGTAGGCAAATCCGTACTGTTTCCAATGCGCCGGTGTTGTTTATCTCTGCC
CGGACTGACGACATGAACCAAGTGATGGCGATTGAGAATGGCGGCGATGATTACATTACGAAACCATTTCATTTAGAAGT
GCTACTGGCTAAAGTAAAAAGCGCCTTGCGCCGATCCTACGGGGAGTACGCCCATGCCCGTGACATCCAGCAAACGGTAA
GAGAACTAGACAACCTTTATTTTTACCCTGACCGAAATGAACTCGTCTATAACGATGCCAAATTGGAATTAACGAAGAAA
GAGTTTTTATTGTTCCAACGTTTAGCGGAATCGCCAAATGTGATTGTTAGTCGGGACGAGCTCTTGGAAACGCTGTGGGA
TGAAGTTGATTTTGTCGATGACAATACGTTATCTGTAAATGTGACACGACTGCGAAAGCGGCTGCAAGAACTTGGCATCA
CTAATGCGATCCAAACGATCCGCGGGCAAGGATATCGGCTGGACGTCAATTGGGGTGGGCGATCCTCATGA

Upstream 100 bases:

>100_bases
CTCGGTTTCCTAGATTTTAAACACCTACAGATGATTGCCCCCTTTTGCAGGTGGACATGCTATGCTAGAGAGTGAAAAGT
GTAAGAAAAGGATGGTTTAT

Downstream 100 bases:

>100_bases
TTCGTACGTTTTTAAAAGACCGTCTAGCGATGATTTTGTTTTTTTACATGAACACAGGGTTGCTCATCTTGGCGGCATCG
TTGTATATGCATATAAGCAA

Product: two-component response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MYHIYIVEDDQQIRRIMADHLERYGYRVTWAENFETIKQEFVAIQPDLVLLDINLPLYDGFYWCRQIRTVSNAPVLFISA
RTDDMNQVMAIENGGDDYITKPFHLEVLLAKVKSALRRSYGEYAHARDIQQTVRELDNLYFYPDRNELVYNDAKLELTKK
EFLLFQRLAESPNVIVSRDELLETLWDEVDFVDDNTLSVNVTRLRKRLQELGITNAIQTIRGQGYRLDVNWGGRSS

Sequences:

>Translated_236_residues
MYHIYIVEDDQQIRRIMADHLERYGYRVTWAENFETIKQEFVAIQPDLVLLDINLPLYDGFYWCRQIRTVSNAPVLFISA
RTDDMNQVMAIENGGDDYITKPFHLEVLLAKVKSALRRSYGEYAHARDIQQTVRELDNLYFYPDRNELVYNDAKLELTKK
EFLLFQRLAESPNVIVSRDELLETLWDEVDFVDDNTLSVNVTRLRKRLQELGITNAIQTIRGQGYRLDVNWGGRSS
>Mature_236_residues
MYHIYIVEDDQQIRRIMADHLERYGYRVTWAENFETIKQEFVAIQPDLVLLDINLPLYDGFYWCRQIRTVSNAPVLFISA
RTDDMNQVMAIENGGDDYITKPFHLEVLLAKVKSALRRSYGEYAHARDIQQTVRELDNLYFYPDRNELVYNDAKLELTKK
EFLLFQRLAESPNVIVSRDELLETLWDEVDFVDDNTLSVNVTRLRKRLQELGITNAIQTIRGQGYRLDVNWGGRSS

Specific function: Member of the two-component regulatory system yvcQ/yvcP [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1786599, Length=231, Percent_Identity=31.1688311688312, Blast_Score=129, Evalue=2e-31,
Organism=Escherichia coli, GI1788394, Length=224, Percent_Identity=32.1428571428571, Blast_Score=125, Evalue=2e-30,
Organism=Escherichia coli, GI1790860, Length=226, Percent_Identity=30.9734513274336, Blast_Score=116, Evalue=2e-27,
Organism=Escherichia coli, GI1789809, Length=226, Percent_Identity=29.2035398230088, Blast_Score=115, Evalue=3e-27,
Organism=Escherichia coli, GI1787375, Length=223, Percent_Identity=29.5964125560538, Blast_Score=108, Evalue=3e-25,
Organism=Escherichia coli, GI1786911, Length=228, Percent_Identity=31.140350877193, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI1790863, Length=232, Percent_Identity=30.1724137931034, Blast_Score=101, Evalue=4e-23,
Organism=Escherichia coli, GI2367329, Length=227, Percent_Identity=29.9559471365639, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI1787229, Length=231, Percent_Identity=29.4372294372294, Blast_Score=95, Evalue=5e-21,
Organism=Escherichia coli, GI87082012, Length=225, Percent_Identity=29.3333333333333, Blast_Score=94, Evalue=8e-21,
Organism=Escherichia coli, GI1786784, Length=230, Percent_Identity=29.1304347826087, Blast_Score=91, Evalue=5e-20,
Organism=Escherichia coli, GI145693140, Length=236, Percent_Identity=30.0847457627119, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI1789402, Length=229, Percent_Identity=30.5676855895196, Blast_Score=88, Evalue=5e-19,
Organism=Escherichia coli, GI1790552, Length=228, Percent_Identity=29.3859649122807, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1788550, Length=115, Percent_Identity=33.0434782608696, Blast_Score=68, Evalue=4e-13,
Organism=Escherichia coli, GI1790299, Length=128, Percent_Identity=30.46875, Blast_Score=65, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 27777; Mature: 27777

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYHIYIVEDDQQIRRIMADHLERYGYRVTWAENFETIKQEFVAIQPDLVLLDINLPLYDG
CEEEEEEECCHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHEEECCCEEEEEECCCHHHH
FYWCRQIRTVSNAPVLFISARTDDMNQVMAIENGGDDYITKPFHLEVLLAKVKSALRRSY
HHHHHHHHHCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHH
GEYAHARDIQQTVRELDNLYFYPDRNELVYNDAKLELTKKEFLLFQRLAESPNVIVSRDE
HHHHHHHHHHHHHHHHHCEEECCCCCCEEEECCEEEEHHHHHHHHHHHHCCCCEEEEHHH
LLETLWDEVDFVDDNTLSVNVTRLRKRLQELGITNAIQTIRGQGYRLDVNWGGRSS
HHHHHHHHCCCCCCCEEEEEHHHHHHHHHHCCHHHHHHHHCCCCEEEEECCCCCCC
>Mature Secondary Structure
MYHIYIVEDDQQIRRIMADHLERYGYRVTWAENFETIKQEFVAIQPDLVLLDINLPLYDG
CEEEEEEECCHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHEEECCCEEEEEECCCHHHH
FYWCRQIRTVSNAPVLFISARTDDMNQVMAIENGGDDYITKPFHLEVLLAKVKSALRRSY
HHHHHHHHHCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHH
GEYAHARDIQQTVRELDNLYFYPDRNELVYNDAKLELTKKEFLLFQRLAESPNVIVSRDE
HHHHHHHHHHHHHHHHHCEEECCCCCCEEEECCEEEEHHHHHHHHHHHHCCCCEEEEHHH
LLETLWDEVDFVDDNTLSVNVTRLRKRLQELGITNAIQTIRGQGYRLDVNWGGRSS
HHHHHHHHCCCCCCCEEEEEHHHHHHHHHHCCHHHHHHHHCCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]