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The map label for this gene is yaaH [H]

Identifier: 56964877

GI number: 56964877

Start: 3239324

End: 3240616

Strand: Direct

Name: yaaH [H]

Synonym: ABC3113

Alternate gene names: 56964877

Gene position: 3239324-3240616 (Clockwise)

Preceding gene: 56964876

Following gene: 56964878

Centisome position: 75.27

GC content: 48.65

Gene sequence:

>1293_bases
ATGCAATTGCACGTCGTTCAGGCAGGGGAATCGCTCTATGGCATTGCCCAAGCTTACAGTACGTCGCCCCAGTCGATTGC
CACTGCCAACCAACTGGATGCCCCTAATGAACTTGTTGTCGGCCAGACGCTTGTCATTCCCATCTACGGAAGATACTATT
TTGTCCAGCCTGGTGATACATTAAGCGTCATTGCTGCGCGCTATGGCTTTTCTGTCCAACAGTTGGCCGAAATAAACAAC
CTTATGCCAACTCAAGTTCTCCCTGTCGGTTTTCGTCTTTACTTGCCTCCTGCCGCCAAGCAGGAAATTGAAACGAATGC
CTATATTGAACCAACACAGGATACGATTAGCGAGGCGTTGCTCACTTCTGCCCGCGAAGCAGCTCCATACTTAACGTACT
TAGCACCGTTCAGTTACCGTATCACTGCTGAAGGCGCACTGTTGCCTGTTCCCTTAGGCAGTCTTCCTGATATTGCCGAC
GAAAACAATACTGCTTTAATGATGGTGATTACAAACTTGCAGGAAGGGGCATTTAGTGGCGAACTTGGCCAGACTGTACT
AGAATCACCTGACATCCAAAATACACTCCTTGATGCGATTATCACAGAAGCCAATCGTGTTGGCCGCTTTTCTGATGTCC
ACTTCGATTTTGAATTTTTACCTCCAGCCATGAGAGAACCTTATAATGCCTTTCTAAGAAAAGCAGTCGACAGGCTCCAT
CAAGAAGGGCTGTTAGTCTCCACTGCTCTTGCCCCAAAAACAAGCGCTGCCCAAACAGGGCAATGGTATGAAGCTCATGA
TTATCGGGCCCATGGTGACATTGTCGATTTTGTTGTGCTCATGACCTATGAGTGGGGCTACTCAGGCGGACCCCCTCAGG
CCGTTTCGCCAATAGGGCCTGTTACCGAAGTAGTCGAATACGCTTTAACTGAAATGGCGCCAGATAAAATCATGCTTGGC
CAAAATTTATATGGCTACGATTGGACATTGCCGTTCGAACCTGGCGGAGAATACGCCCGGGCAATTAGCCCCCAGCAAGC
GATTGCATTAGCGCGTGAACATAATGTTGCGATTGAGTTTGACACAGATGCACAGGCCCCTTTCTTCCACTACATTGACG
CGAACGGTAGGGAACATGAAGTGTGGTTTGAAGATGGCCGTTCCATCCAGGCGAAGTTCAACCTAATTAAACAGAACGAA
CTTCGAGGCATTAGCTACTGGAAGCTCGGCTTGTCATTCCCGCAAAACTGGCTGTTGCTCAATGACCAATTTACGATCCG
CAAACGCCGCTAA

Upstream 100 bases:

>100_bases
AGGGACAAAGAGGACGCGTAGCGCCTCTTTGCTTTTTTCATGTCCGCCCTTCTTTCCACATAGGTATAGAGTATTAACAA
GAGGAAAGAGGGTTTTTTTC

Downstream 100 bases:

>100_bases
TACACGTTTAGGCAGATGCAAAAACGGCAATTCTATAAGTGCCTGTCCAAGGCAAAACAAGGCAGTAGGAATCGATGTGG
CATCGTCGTCCTAAAGCCTG

Product: glycosyl hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 430; Mature: 430

Protein sequence:

>430_residues
MQLHVVQAGESLYGIAQAYSTSPQSIATANQLDAPNELVVGQTLVIPIYGRYYFVQPGDTLSVIAARYGFSVQQLAEINN
LMPTQVLPVGFRLYLPPAAKQEIETNAYIEPTQDTISEALLTSAREAAPYLTYLAPFSYRITAEGALLPVPLGSLPDIAD
ENNTALMMVITNLQEGAFSGELGQTVLESPDIQNTLLDAIITEANRVGRFSDVHFDFEFLPPAMREPYNAFLRKAVDRLH
QEGLLVSTALAPKTSAAQTGQWYEAHDYRAHGDIVDFVVLMTYEWGYSGGPPQAVSPIGPVTEVVEYALTEMAPDKIMLG
QNLYGYDWTLPFEPGGEYARAISPQQAIALAREHNVAIEFDTDAQAPFFHYIDANGREHEVWFEDGRSIQAKFNLIKQNE
LRGISYWKLGLSFPQNWLLLNDQFTIRKRR

Sequences:

>Translated_430_residues
MQLHVVQAGESLYGIAQAYSTSPQSIATANQLDAPNELVVGQTLVIPIYGRYYFVQPGDTLSVIAARYGFSVQQLAEINN
LMPTQVLPVGFRLYLPPAAKQEIETNAYIEPTQDTISEALLTSAREAAPYLTYLAPFSYRITAEGALLPVPLGSLPDIAD
ENNTALMMVITNLQEGAFSGELGQTVLESPDIQNTLLDAIITEANRVGRFSDVHFDFEFLPPAMREPYNAFLRKAVDRLH
QEGLLVSTALAPKTSAAQTGQWYEAHDYRAHGDIVDFVVLMTYEWGYSGGPPQAVSPIGPVTEVVEYALTEMAPDKIMLG
QNLYGYDWTLPFEPGGEYARAISPQQAIALAREHNVAIEFDTDAQAPFFHYIDANGREHEVWFEDGRSIQAKFNLIKQNE
LRGISYWKLGLSFPQNWLLLNDQFTIRKRR
>Mature_430_residues
MQLHVVQAGESLYGIAQAYSTSPQSIATANQLDAPNELVVGQTLVIPIYGRYYFVQPGDTLSVIAARYGFSVQQLAEINN
LMPTQVLPVGFRLYLPPAAKQEIETNAYIEPTQDTISEALLTSAREAAPYLTYLAPFSYRITAEGALLPVPLGSLPDIAD
ENNTALMMVITNLQEGAFSGELGQTVLESPDIQNTLLDAIITEANRVGRFSDVHFDFEFLPPAMREPYNAFLRKAVDRLH
QEGLLVSTALAPKTSAAQTGQWYEAHDYRAHGDIVDFVVLMTYEWGYSGGPPQAVSPIGPVTEVVEYALTEMAPDKIMLG
QNLYGYDWTLPFEPGGEYARAISPQQAIALAREHNVAIEFDTDAQAPFFHYIDANGREHEVWFEDGRSIQAKFNLIKQNE
LRGISYWKLGLSFPQNWLLLNDQFTIRKRR

Specific function: May be required for the L-alanine-stimulated germination pathway [H]

COG id: COG3858

COG function: function code R; Predicted glycosyl hydrolase

Gene ontology:

Cell location: Spore wall (Probable). Note=Probably localized either on the surface of the outer spore membrane and/or in the inner spore coat [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 LysM repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011583
- InterPro:   IPR001223
- InterPro:   IPR017853
- InterPro:   IPR013781
- InterPro:   IPR018392
- InterPro:   IPR002482 [H]

Pfam domain/function: PF00704 Glyco_hydro_18; PF01476 LysM [H]

EC number: NA

Molecular weight: Translated: 47889; Mature: 47889

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLHVVQAGESLYGIAQAYSTSPQSIATANQLDAPNELVVGQTLVIPIYGRYYFVQPGDT
CEEEEEECCCHHHHHHHHHCCCCHHHHHHHHCCCCCCEEECCEEEEEEECEEEEECCCCH
LSVIAARYGFSVQQLAEINNLMPTQVLPVGFRLYLPPAAKQEIETNAYIEPTQDTISEAL
HHHHHHHHCCCHHHHHHHHCCCCCEEECCCEEEEECCCCHHHCCCCCEECCCHHHHHHHH
LTSAREAAPYLTYLAPFSYRITAEGALLPVPLGSLPDIADENNTALMMVITNLQEGAFSG
HHHHHHHCCCEEEECCCEEEEEECCCEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCC
ELGQTVLESPDIQNTLLDAIITEANRVGRFSDVHFDFEFLPPAMREPYNAFLRKAVDRLH
HHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEEHEECCHHHCCHHHHHHHHHHHHHH
QEGLLVSTALAPKTSAAQTGQWYEAHDYRAHGDIVDFVVLMTYEWGYSGGPPQAVSPIGP
HCCCEEEEECCCCCCCCCCCCCEECCCCCCCCCHHHEEEEEEEECCCCCCCCCCCCCCCH
VTEVVEYALTEMAPDKIMLGQNLYGYDWTLPFEPGGEYARAISPQQAIALAREHNVAIEF
HHHHHHHHHHHCCCCEEEECCCCCCCEEEECCCCCCCHHHHCCHHHHHHHHHCCCEEEEE
DTDAQAPFFHYIDANGREHEVWFEDGRSIQAKFNLIKQNELRGISYWKLGLSFPQNWLLL
CCCCCCCEEEEECCCCCEEEEEECCCCEEEEEEEEEECCCCCCEEEEEECCCCCCCEEEE
NDQFTIRKRR
CCCEEEEECC
>Mature Secondary Structure
MQLHVVQAGESLYGIAQAYSTSPQSIATANQLDAPNELVVGQTLVIPIYGRYYFVQPGDT
CEEEEEECCCHHHHHHHHHCCCCHHHHHHHHCCCCCCEEECCEEEEEEECEEEEECCCCH
LSVIAARYGFSVQQLAEINNLMPTQVLPVGFRLYLPPAAKQEIETNAYIEPTQDTISEAL
HHHHHHHHCCCHHHHHHHHCCCCCEEECCCEEEEECCCCHHHCCCCCEECCCHHHHHHHH
LTSAREAAPYLTYLAPFSYRITAEGALLPVPLGSLPDIADENNTALMMVITNLQEGAFSG
HHHHHHHCCCEEEECCCEEEEEECCCEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCC
ELGQTVLESPDIQNTLLDAIITEANRVGRFSDVHFDFEFLPPAMREPYNAFLRKAVDRLH
HHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEEHEECCHHHCCHHHHHHHHHHHHHH
QEGLLVSTALAPKTSAAQTGQWYEAHDYRAHGDIVDFVVLMTYEWGYSGGPPQAVSPIGP
HCCCEEEEECCCCCCCCCCCCCEECCCCCCCCCHHHEEEEEEEECCCCCCCCCCCCCCCH
VTEVVEYALTEMAPDKIMLGQNLYGYDWTLPFEPGGEYARAISPQQAIALAREHNVAIEF
HHHHHHHHHHHCCCCEEEECCCCCCCEEEECCCCCCCHHHHCCHHHHHHHHHCCCEEEEE
DTDAQAPFFHYIDANGREHEVWFEDGRSIQAKFNLIKQNELRGISYWKLGLSFPQNWLLL
CCCCCCCEEEEECCCCCEEEEEECCCCEEEEEEEEEECCCCCCEEEEEECCCCCCCEEEE
NDQFTIRKRR
CCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377; 10419957 [H]