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The map label for this gene is lytR [H]

Identifier: 56964860

GI number: 56964860

Start: 3217293

End: 3218381

Strand: Direct

Name: lytR [H]

Synonym: ABC3096

Alternate gene names: 56964860

Gene position: 3217293-3218381 (Clockwise)

Preceding gene: 56964852

Following gene: 56964861

Centisome position: 74.75

GC content: 45.36

Gene sequence:

>1089_bases
ATGGTTGAAGATTCAAGAAAACGTCGCCGAAAAAAAAGACGGACAAAATTTATTTTAAAGACAACTTTAATTGCAGCCAT
TGTCGCCTTGCTCGCATTAGGCAGTGGCGTTTGGTATATTATTAACCATTTAAGCGATACAGCGGCCGGGTCTTACCAAG
GCTTGGACCGAGGCAATAAATCTGAGAGGCGGATTGAGCCAGTGGATGTTGGTAAGGACAATTTTTCGATGCTGCTTTTA
GGAAGTGACTACCGTGAAGGCGATGGCGCCGAACGAACGGACTCCGTCATGGTAGCAACTTTTAACAAAAGCGAGAGATC
GATTATCCTAACGAGCATTCCACGTGACACTTATGTCGAAATTGTCGGCTATCGAGGCGGCGGCTTTAAAGATAAAATCA
CACATGCCCACGCATTTGGTGGTATTGACATGGCGATTGACACCGTTGAGGAACTGCTAGATATACCGATTGACCATTAC
GCACTCATCCGTTTTGACGGTCTTGTAGATGTTGTCGATGCTTTAGGCGGCATTGACCTTGAACTCACATACGACATTGA
CTTTGAAGAAAAAAGCCGCGGTGTTAATTTTGAATTTCGTAAAGGGCCAGCCCATTTAAACGGCGAGCAAGCACTCGCTT
ATGCACGTGAGCGAAAATCCGCAGCTGGCGGCGGCGATAAAGGCCGTGGCATCCGCCAGCAACAAGTCGTTGAAGCCATC
ATTGATAAAGCTGCTTCTTTTTCTAGCATCACACGCTTTGATGATATCTTTCAAGCCGTTGGTGACAACTTGCAAATGGA
CTTAACGTTCCCAAATATTATCTCACTCCATGGTTATGCTTCGTCTCTTAACGGCATTGAAACAATGCAATTAGAGACTA
CTGGTACTCGTCGCCCTGATATTTATGGCAATAGCATCTGGTATGAGGATATTCATGAAGACAGCTTGCTCGAAATCCAG
CAAACTCTTAAACAACACCTTGAACTGACGGACCCGGGTTCAGCTAACTTTATAGACCCGACCAGTCCCGAAAGTGAATC
GTTAACTGATACAAACAGTCCATCTGGCACAACAAGCCCAACCGAATAA

Upstream 100 bases:

>100_bases
AATTATGATATAATTTGATTTTGAAATGCGCACTTTGTCGATTTATGCTATGGTTCCCACTTTATTGGAACCTACTTATA
CTGAAATGAGGGATTGACGT

Downstream 100 bases:

>100_bases
CTGTAAAAAACGTCCGTCTTTTTTCCCGAAGATGGACGTTTTTTTTGCATGGCGTTGTATTATCCGACAAAATTTGAGAA
AATATGTTGAACCTATTAAT

Product: LytR family transcriptional antiterminator

Products: NA

Alternate protein names: Membrane-bound protein lytR [H]

Number of amino acids: Translated: 362; Mature: 362

Protein sequence:

>362_residues
MVEDSRKRRRKKRRTKFILKTTLIAAIVALLALGSGVWYIINHLSDTAAGSYQGLDRGNKSERRIEPVDVGKDNFSMLLL
GSDYREGDGAERTDSVMVATFNKSERSIILTSIPRDTYVEIVGYRGGGFKDKITHAHAFGGIDMAIDTVEELLDIPIDHY
ALIRFDGLVDVVDALGGIDLELTYDIDFEEKSRGVNFEFRKGPAHLNGEQALAYARERKSAAGGGDKGRGIRQQQVVEAI
IDKAASFSSITRFDDIFQAVGDNLQMDLTFPNIISLHGYASSLNGIETMQLETTGTRRPDIYGNSIWYEDIHEDSLLEIQ
QTLKQHLELTDPGSANFIDPTSPESESLTDTNSPSGTTSPTE

Sequences:

>Translated_362_residues
MVEDSRKRRRKKRRTKFILKTTLIAAIVALLALGSGVWYIINHLSDTAAGSYQGLDRGNKSERRIEPVDVGKDNFSMLLL
GSDYREGDGAERTDSVMVATFNKSERSIILTSIPRDTYVEIVGYRGGGFKDKITHAHAFGGIDMAIDTVEELLDIPIDHY
ALIRFDGLVDVVDALGGIDLELTYDIDFEEKSRGVNFEFRKGPAHLNGEQALAYARERKSAAGGGDKGRGIRQQQVVEAI
IDKAASFSSITRFDDIFQAVGDNLQMDLTFPNIISLHGYASSLNGIETMQLETTGTRRPDIYGNSIWYEDIHEDSLLEIQ
QTLKQHLELTDPGSANFIDPTSPESESLTDTNSPSGTTSPTE
>Mature_362_residues
MVEDSRKRRRKKRRTKFILKTTLIAAIVALLALGSGVWYIINHLSDTAAGSYQGLDRGNKSERRIEPVDVGKDNFSMLLL
GSDYREGDGAERTDSVMVATFNKSERSIILTSIPRDTYVEIVGYRGGGFKDKITHAHAFGGIDMAIDTVEELLDIPIDHY
ALIRFDGLVDVVDALGGIDLELTYDIDFEEKSRGVNFEFRKGPAHLNGEQALAYARERKSAAGGGDKGRGIRQQQVVEAI
IDKAASFSSITRFDDIFQAVGDNLQMDLTFPNIISLHGYASSLNGIETMQLETTGTRRPDIYGNSIWYEDIHEDSLLEIQ
QTLKQHLELTDPGSANFIDPTSPESESLTDTNSPSGTTSPTE

Specific function: Attenuator role for operon expression [H]

COG id: COG1316

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LytR/CpsA/Psr regulatory protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004474 [H]

Pfam domain/function: PF03816 LytR_cpsA_psr [H]

EC number: NA

Molecular weight: Translated: 40014; Mature: 40014

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVEDSRKRRRKKRRTKFILKTTLIAAIVALLALGSGVWYIINHLSDTAAGSYQGLDRGNK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCC
SERRIEPVDVGKDNFSMLLLGSDYREGDGAERTDSVMVATFNKSERSIILTSIPRDTYVE
CCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCEEE
IVGYRGGGFKDKITHAHAFGGIDMAIDTVEELLDIPIDHYALIRFDGLVDVVDALGGIDL
EEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHCCCCE
ELTYDIDFEEKSRGVNFEFRKGPAHLNGEQALAYARERKSAAGGGDKGRGIRQQQVVEAI
EEEEECCHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
IDKAASFSSITRFDDIFQAVGDNLQMDLTFPNIISLHGYASSLNGIETMQLETTGTRRPD
HHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEECCHHHHCCCCEEEEEEECCCCCCC
IYGNSIWYEDIHEDSLLEIQQTLKQHLELTDPGSANFIDPTSPESESLTDTNSPSGTTSP
CCCCCCCHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TE
CC
>Mature Secondary Structure
MVEDSRKRRRKKRRTKFILKTTLIAAIVALLALGSGVWYIINHLSDTAAGSYQGLDRGNK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCC
SERRIEPVDVGKDNFSMLLLGSDYREGDGAERTDSVMVATFNKSERSIILTSIPRDTYVE
CCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCEEE
IVGYRGGGFKDKITHAHAFGGIDMAIDTVEELLDIPIDHYALIRFDGLVDVVDALGGIDL
EEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHCCCCE
ELTYDIDFEEKSRGVNFEFRKGPAHLNGEQALAYARERKSAAGGGDKGRGIRQQQVVEAI
EEEEECCHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
IDKAASFSSITRFDDIFQAVGDNLQMDLTFPNIISLHGYASSLNGIETMQLETTGTRRPD
HHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEECCHHHHCCCCEEEEEEECCCCCCC
IYGNSIWYEDIHEDSLLEIQQTLKQHLELTDPGSANFIDPTSPESESLTDTNSPSGTTSP
CCCCCCCHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TE
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]