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The map label for this gene is yjeA [H]

Identifier: 56964758

GI number: 56964758

Start: 3115665

End: 3116462

Strand: Direct

Name: yjeA [H]

Synonym: ABC2994

Alternate gene names: 56964758

Gene position: 3115665-3116462 (Clockwise)

Preceding gene: 56964756

Following gene: 56964763

Centisome position: 72.39

GC content: 40.98

Gene sequence:

>798_bases
GTGTATTGGCCGACTTTCAAGACTGTGTTTCGTTATATATTGATTTGTCATGTCTTATTTTTACTGATACCGAGTCAAGT
GGACGCTGCTATAGTGAGAGAAAGGCATGAGTACGAAAAGACAGGACATGTGTTCTGGGAAATTCCAACAGATGAAAAAA
TTGTAGCCTTAACGTTTGATGATGGCCCAGATCGTACAAACACACCCCTTATTCTAGATGTGCTTAAGAAATACGAGGCA
AAAGCAACCTTTTTTGTAGTCGGCAAGAATGTGAAAGAGAATGCCGATGTTGTCCAAAGGACGATCATGGAAGGACACGA
ACTTGGCAATCACACGTATACCCACACTTACAATGAGTCAATTAACCAAGCAACCTTAACCACTGAAATGAACAAAACGG
ACATGCTTCTTTTAGAATTGTTCGCCATCAAACCAACCTTTTTTCGCCCAGTCGGAGGCTATTATAATGATCTTATTATT
GAAACTGCGATTGAGGCAAAACACGACGTTTTTTTATGGTCTTGGCATCAAGATACAAGAGATTGGGCAAACCGGAATAA
AAAGCAACTTTCAGCCCAAGTTTTAAACAATATACGTCCTGGCGATGTCATTCTTTTCCATGACGGAGGCGGTGACCGTA
CGCCAACAATAGAAGCAATTAAAGAAATTATCCCCGCCTTGCAAGATGAAGGCTACAGCTTTTTAACACTATCGGAAATG
GTCGATCGCCATAAATTCTCTTCCAAACAAAACACAAACCCGGTCTTTAGTTTAGCGCCGCTTCCCTTTATGAAGTGA

Upstream 100 bases:

>100_bases
CCATCAAAAACAGGATGGTGATGACGTTAATTTGTTCGGATAAACGGCATTGTAAAGAGCCATAATAAATGGAACGGTGT
TTAAAAAAGGAGAGAGACAA

Downstream 100 bases:

>100_bases
AGCGGGTTCTGCTTCTAATGCTTCTTGATAATCTTTATAAGCAAAGTAAGCTGCAATAAATGAACCTATTAAAAACAAGG
CAGATCCTCCAAGCGTAAAC

Product: polysaccharide deacetylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MYWPTFKTVFRYILICHVLFLLIPSQVDAAIVRERHEYEKTGHVFWEIPTDEKIVALTFDDGPDRTNTPLILDVLKKYEA
KATFFVVGKNVKENADVVQRTIMEGHELGNHTYTHTYNESINQATLTTEMNKTDMLLLELFAIKPTFFRPVGGYYNDLII
ETAIEAKHDVFLWSWHQDTRDWANRNKKQLSAQVLNNIRPGDVILFHDGGGDRTPTIEAIKEIIPALQDEGYSFLTLSEM
VDRHKFSSKQNTNPVFSLAPLPFMK

Sequences:

>Translated_265_residues
MYWPTFKTVFRYILICHVLFLLIPSQVDAAIVRERHEYEKTGHVFWEIPTDEKIVALTFDDGPDRTNTPLILDVLKKYEA
KATFFVVGKNVKENADVVQRTIMEGHELGNHTYTHTYNESINQATLTTEMNKTDMLLLELFAIKPTFFRPVGGYYNDLII
ETAIEAKHDVFLWSWHQDTRDWANRNKKQLSAQVLNNIRPGDVILFHDGGGDRTPTIEAIKEIIPALQDEGYSFLTLSEM
VDRHKFSSKQNTNPVFSLAPLPFMK
>Mature_265_residues
MYWPTFKTVFRYILICHVLFLLIPSQVDAAIVRERHEYEKTGHVFWEIPTDEKIVALTFDDGPDRTNTPLILDVLKKYEA
KATFFVVGKNVKENADVVQRTIMEGHELGNHTYTHTYNESINQATLTTEMNKTDMLLLELFAIKPTFFRPVGGYYNDLII
ETAIEAKHDVFLWSWHQDTRDWANRNKKQLSAQVLNNIRPGDVILFHDGGGDRTPTIEAIKEIIPALQDEGYSFLTLSEM
VDRHKFSSKQNTNPVFSLAPLPFMK

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide deacetylase family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6323339, Length=129, Percent_Identity=31.0077519379845, Blast_Score=64, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6323338, Length=195, Percent_Identity=26.6666666666667, Blast_Score=62, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021729
- InterPro:   IPR011330
- InterPro:   IPR017219
- InterPro:   IPR002509 [H]

Pfam domain/function: PF11738 DUF3298; PF01522 Polysacc_deac_1 [H]

EC number: NA

Molecular weight: Translated: 30607; Mature: 30607

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYWPTFKTVFRYILICHVLFLLIPSQVDAAIVRERHEYEKTGHVFWEIPTDEKIVALTFD
CCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEEEC
DGPDRTNTPLILDVLKKYEAKATFFVVGKNVKENADVVQRTIMEGHELGNHTYTHTYNES
CCCCCCCCCHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEECCCC
INQATLTTEMNKTDMLLLELFAIKPTFFRPVGGYYNDLIIETAIEAKHDVFLWSWHQDTR
CCCEEEEECCCCHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHCCCCCEEEEEECCHHH
DWANRNKKQLSAQVLNNIRPGDVILFHDGGGDRTPTIEAIKEIIPALQDEGYSFLTLSEM
HHHCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEHHHH
VDRHKFSSKQNTNPVFSLAPLPFMK
HHHHHCCCCCCCCCEEEECCCCCCC
>Mature Secondary Structure
MYWPTFKTVFRYILICHVLFLLIPSQVDAAIVRERHEYEKTGHVFWEIPTDEKIVALTFD
CCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEEEC
DGPDRTNTPLILDVLKKYEAKATFFVVGKNVKENADVVQRTIMEGHELGNHTYTHTYNES
CCCCCCCCCHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEECCCC
INQATLTTEMNKTDMLLLELFAIKPTFFRPVGGYYNDLIIETAIEAKHDVFLWSWHQDTR
CCCEEEEECCCCHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHCCCCCEEEEEECCHHH
DWANRNKKQLSAQVLNNIRPGDVILFHDGGGDRTPTIEAIKEIIPALQDEGYSFLTLSEM
HHHCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEHHHH
VDRHKFSSKQNTNPVFSLAPLPFMK
HHHHHCCCCCCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9579062; 9384377 [H]