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The map label for this gene is ycdQ [C]

Identifier: 56964413

GI number: 56964413

Start: 2777797

End: 2779296

Strand: Direct

Name: ycdQ [C]

Synonym: ABC2648

Alternate gene names: 56964413

Gene position: 2777797-2779296 (Clockwise)

Preceding gene: 56964412

Following gene: 56964414

Centisome position: 64.54

GC content: 43.33

Gene sequence:

>1500_bases
TTGAGCACAGAACATTTGCTTCCAATTACAAAAAATGCGTTTATGAAACCAAGAGTGGTTGCCTTCATTCCAGCACATAA
TGAAGAACAGTCGATTCGCGATTGTTTAGAAGGGTTAGCAGACCAGCAATTACCGGCAGGAGTTGACCTTGATGTGATCG
TCATTGCCGATAACTGCACAGATCGTACGGCAGAAGTGGCCTTACATTGCGGGCAAGACCTCAATTTGCAATTGATCGTG
CTAAAAACGAGAAACAACAAAAAGCGAAAAGTCGGAGCATTGAACACTGCTTGGAAAAGCTTGTATGGCGATTTATTAGA
CATTCACGCATCCAACTTAAGTCCGTACCAACAACTTTACAATAAATCGGTAAAGGCTATTTTAGGAATGGATGCAGATA
GCAGAATGGCACCTGGAGCGCTTTTGCACCTGTGGGAAGGCTTAATGAGTGCCCGAAATATTGGCGGGGTAATGGCCAAG
TACACGATGAGAATGCCTAAAAAGCTAAAAGAACTTTCTTTGGATGATCCATACTATGAAGAAAAAATCGCTAGCGGCCA
GTATGGGAACCCCTTTACTAGATGGTGGACGCACCAACAAAAACAAGATATGGCCAGTTGGCTTTTAACATTGCAATATA
ACGGGGGCAGCACTTACGTATTAGGTGGGCAAGCGACGCTCTTTCGGCCAGAGGCACTCCATGATATTGTGAACCGAAAC
AATCTAGACGGACCGTGGCAAGATGATAGTGACGTCGAAGATATGCTACTAACTTGGCAGCTGCAAAAAGCGAAATGGAA
AACGCTGATCAGCCCAAACGCTCGCTGCTTTGTTGACTCGATGAAGACATACCACACGTTCCGCCAGCAACGATACAAAT
GGGATTCCGGCACAATCGATTTGCTTACGAACAGCGAATTGGACATAAAAACAAAGCATCGATGGCGGATTTGGAGGGCG
CAGTTTAGGTCATTGCTCGATTTAACGATTCGGATCTTGTTGGTCGTTTTGCTCGCTACTTCCCTTATTACTGCTCAGTT
CTCCTGGAATTGGATTTGGGTCATTCCTATAGCAGTCGCCTCTCTCCTTAATTTGATTTTGGCCGTAAAAACGCCAATGA
GAAGGCCAATCGATGTCATGCTTTCTGGCACCGTCATAAGTGCTGAAATTTATTTATGGGTGAAATTATCGATTTTTATT
CATATTTGGCTAGACAAGCTTTCCAAAAACAAAAAAGACGGCTGGCATAATCAATACAACGCTGAGAAAGGACAAACACG
GAGCAAACTGTTCGAATGGTGGTTTGTTCTTCTTATTTTGTTAGCTTTAATCGTTTTTGCAGCGTTCTATTTCAGGGATT
TTTTCACTAGCTCCAAAGTGGTTGCTTTGTCAGCACCTTACTTAAAAGTCGGCTGGACGATTTTGAGCTATTTCACTGGA
TGGGCTACATTGTTAATGCTTTATCAATTGTGGACATTGCGCAGGAAATACAAGGCCTAA

Upstream 100 bases:

>100_bases
TCGCAGCAGGAGGAGCAATCTATTTTTAAGCATAGTTATTTTTTACTACGTATCGATCATAAACATCAAACAAGCATACA
CGGAAAATGGGGGTAGAGAA

Downstream 100 bases:

>100_bases
TTGCCCGAATCCGTTCTTCGGATTTTGCGTTTTAAGAAAAAACGCTTTACCTATTTAGTGAAAGCGCCCAAGCAAAACCG
TCAAACGGAACATTCCATAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 499; Mature: 498

Protein sequence:

>499_residues
MSTEHLLPITKNAFMKPRVVAFIPAHNEEQSIRDCLEGLADQQLPAGVDLDVIVIADNCTDRTAEVALHCGQDLNLQLIV
LKTRNNKKRKVGALNTAWKSLYGDLLDIHASNLSPYQQLYNKSVKAILGMDADSRMAPGALLHLWEGLMSARNIGGVMAK
YTMRMPKKLKELSLDDPYYEEKIASGQYGNPFTRWWTHQQKQDMASWLLTLQYNGGSTYVLGGQATLFRPEALHDIVNRN
NLDGPWQDDSDVEDMLLTWQLQKAKWKTLISPNARCFVDSMKTYHTFRQQRYKWDSGTIDLLTNSELDIKTKHRWRIWRA
QFRSLLDLTIRILLVVLLATSLITAQFSWNWIWVIPIAVASLLNLILAVKTPMRRPIDVMLSGTVISAEIYLWVKLSIFI
HIWLDKLSKNKKDGWHNQYNAEKGQTRSKLFEWWFVLLILLALIVFAAFYFRDFFTSSKVVALSAPYLKVGWTILSYFTG
WATLLMLYQLWTLRRKYKA

Sequences:

>Translated_499_residues
MSTEHLLPITKNAFMKPRVVAFIPAHNEEQSIRDCLEGLADQQLPAGVDLDVIVIADNCTDRTAEVALHCGQDLNLQLIV
LKTRNNKKRKVGALNTAWKSLYGDLLDIHASNLSPYQQLYNKSVKAILGMDADSRMAPGALLHLWEGLMSARNIGGVMAK
YTMRMPKKLKELSLDDPYYEEKIASGQYGNPFTRWWTHQQKQDMASWLLTLQYNGGSTYVLGGQATLFRPEALHDIVNRN
NLDGPWQDDSDVEDMLLTWQLQKAKWKTLISPNARCFVDSMKTYHTFRQQRYKWDSGTIDLLTNSELDIKTKHRWRIWRA
QFRSLLDLTIRILLVVLLATSLITAQFSWNWIWVIPIAVASLLNLILAVKTPMRRPIDVMLSGTVISAEIYLWVKLSIFI
HIWLDKLSKNKKDGWHNQYNAEKGQTRSKLFEWWFVLLILLALIVFAAFYFRDFFTSSKVVALSAPYLKVGWTILSYFTG
WATLLMLYQLWTLRRKYKA
>Mature_498_residues
STEHLLPITKNAFMKPRVVAFIPAHNEEQSIRDCLEGLADQQLPAGVDLDVIVIADNCTDRTAEVALHCGQDLNLQLIVL
KTRNNKKRKVGALNTAWKSLYGDLLDIHASNLSPYQQLYNKSVKAILGMDADSRMAPGALLHLWEGLMSARNIGGVMAKY
TMRMPKKLKELSLDDPYYEEKIASGQYGNPFTRWWTHQQKQDMASWLLTLQYNGGSTYVLGGQATLFRPEALHDIVNRNN
LDGPWQDDSDVEDMLLTWQLQKAKWKTLISPNARCFVDSMKTYHTFRQQRYKWDSGTIDLLTNSELDIKTKHRWRIWRAQ
FRSLLDLTIRILLVVLLATSLITAQFSWNWIWVIPIAVASLLNLILAVKTPMRRPIDVMLSGTVISAEIYLWVKLSIFIH
IWLDKLSKNKKDGWHNQYNAEKGQTRSKLFEWWFVLLILLALIVFAAFYFRDFFTSSKVVALSAPYLKVGWTILSYFTGW
ATLLMLYQLWTLRRKYKA

Specific function: Unknown

COG id: COG1215

COG function: function code M; Glycosyltransferases, probably involved in cell wall biogenesis

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57625; Mature: 57494

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTEHLLPITKNAFMKPRVVAFIPAHNEEQSIRDCLEGLADQQLPAGVDLDVIVIADNCT
CCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCC
DRTAEVALHCGQDLNLQLIVLKTRNNKKRKVGALNTAWKSLYGDLLDIHASNLSPYQQLY
CHHHHHHHCCCCCCCEEEEEEECCCCCCHHHCHHHHHHHHHHHHHHHHHCCCCCHHHHHH
NKSVKAILGMDADSRMAPGALLHLWEGLMSARNIGGVMAKYTMRMPKKLKELSLDDPYYE
HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
EKIASGQYGNPFTRWWTHQQKQDMASWLLTLQYNGGSTYVLGGQATLFRPEALHDIVNRN
HHHCCCCCCCCHHHHHCCHHHHHHHHEEEEEEECCCEEEEECCCEEEECHHHHHHHHCCC
NLDGPWQDDSDVEDMLLTWQLQKAKWKTLISPNARCFVDSMKTYHTFRQQRYKWDSGTID
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEE
LLTNSELDIKTKHRWRIWRAQFRSLLDLTIRILLVVLLATSLITAQFSWNWIWVIPIAVA
EEECCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEHHHHHH
SLLNLILAVKTPMRRPIDVMLSGTVISAEIYLWVKLSIFIHIWLDKLSKNKKDGWHNQYN
HHHHHHHHHCCCCCCCCEEEEECEEEEEEEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCC
AEKGQTRSKLFEWWFVLLILLALIVFAAFYFRDFFTSSKVVALSAPYLKVGWTILSYFTG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHH
WATLLMLYQLWTLRRKYKA
HHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
STEHLLPITKNAFMKPRVVAFIPAHNEEQSIRDCLEGLADQQLPAGVDLDVIVIADNCT
CCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCC
DRTAEVALHCGQDLNLQLIVLKTRNNKKRKVGALNTAWKSLYGDLLDIHASNLSPYQQLY
CHHHHHHHCCCCCCCEEEEEEECCCCCCHHHCHHHHHHHHHHHHHHHHHCCCCCHHHHHH
NKSVKAILGMDADSRMAPGALLHLWEGLMSARNIGGVMAKYTMRMPKKLKELSLDDPYYE
HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
EKIASGQYGNPFTRWWTHQQKQDMASWLLTLQYNGGSTYVLGGQATLFRPEALHDIVNRN
HHHCCCCCCCCHHHHHCCHHHHHHHHEEEEEEECCCEEEEECCCEEEECHHHHHHHHCCC
NLDGPWQDDSDVEDMLLTWQLQKAKWKTLISPNARCFVDSMKTYHTFRQQRYKWDSGTID
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEE
LLTNSELDIKTKHRWRIWRAQFRSLLDLTIRILLVVLLATSLITAQFSWNWIWVIPIAVA
EEECCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEHHHHHH
SLLNLILAVKTPMRRPIDVMLSGTVISAEIYLWVKLSIFIHIWLDKLSKNKKDGWHNQYN
HHHHHHHHHCCCCCCCCEEEEECEEEEEEEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCC
AEKGQTRSKLFEWWFVLLILLALIVFAAFYFRDFFTSSKVVALSAPYLKVGWTILSYFTG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHH
WATLLMLYQLWTLRRKYKA
HHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA