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The map label for this gene is yurR [H]

Identifier: 56964360

GI number: 56964360

Start: 2721409

End: 2722530

Strand: Direct

Name: yurR [H]

Synonym: ABC2595

Alternate gene names: 56964360

Gene position: 2721409-2722530 (Clockwise)

Preceding gene: 56964345

Following gene: 56964371

Centisome position: 63.23

GC content: 50.62

Gene sequence:

>1122_bases
ATGAAAAAAATTGTCGTAATTGGTGGAGGCATTTTAGGAAGTTCCACAGCCTACCATCTTGCTAAAAACGGTGCGTCTGT
CACGCTTATTGACGACAACCATCATGGGAAGGCGACACAAGCAGCAGCAGGGATTGTTTGCCCCTGGCTTTCAAAACGCC
GCAACCAAAAATGGTACCGCCTTGTTAAACAAGGCGCCGCTTACTACCCAGACTTGATCAAGCAGTTGGCCGCACTTGGG
CAAAAACAAACAGGCTATAAGCAAACGGGCGCATTGTGGCTCCATCAAGATTCAAAAGAACTTGCAGCCGCCTATGAGCG
GGCCCGCCAAAAACAAGCCGATGCACCAGAAATGGGTGAACTAACGGTTTTGTCCCCTTCTGAAACGCAAACGCTTTTTC
CGCCCCTAAGCAACGATTTTGGTGCCGTTCATGTGAGTGGCGCAGCGCGTGTCGACGGCTCTAGCTTAAATAAAGCCCTG
CAACAAGCTGCCCAAAATCTTGGCGCTACCCTTATTCCTGCAAAAGCAACGCTTGTTCGTGAATCACCCCGTAAGCTCAG
CGTTTATGCTGACGGAAAACGAGTGCAAGGGGATGAAATGGTCGTTGCTTGCGGCGCTTGGGCAAAAGAGTTGCTCGCTC
CCGTTGGCATTGCCGTGGACGTGCGGGAACAAAAAGCACAAATCATCCATTTACATCTCGAAACAAACACAGATGAATGG
CCAGTAGTCATGCCACCTGGAAATTCCTATTTGCTTGCTTTTGAGAACGGCCGCATCGTTGCAGGCACAACCCATGAGGA
TTATCCCCGCTTTAATACAGCCGTGACTGCTGGGGGAATGCACACGATACTGGCCAATGCTCTTAATGTTGCCCCAGGGT
TACAAAAAGCAGAATGGCTTGAAACGCGAGTCGGGTTCCGTCCCGTCGTCCCTCATTTCCAACCGGTCTTCGGCTTGCTT
CCTGGCGTAGAGGACGTGTGGTTTGCCAACGGCCTCGGCTCAAGTGGCTTAACGACTGGGCCTTATATTGGCATGCTTCT
TGCACAGCAAATGCTTGGCAATCGGATGTCTCTTGATCCTGAAGACTACAAAGTCGCTACCATCCTTCAAGACAATCGAT
AA

Upstream 100 bases:

>100_bases
TTTGTTAAAAATCTACTAAAGACCTTCATTCAGTTGACACCGTTTGCCCCTTTCGTTACGCTCAAAAAGGACTACTGACG
AACAGAAGGGACTCCTGTTT

Downstream 100 bases:

>100_bases
AAGCGTCGAATTTTATCTTCCTAATAGGGCTGATGAGACGGGAAAACCTCTTTCACCCTTGTTCATGTAACGAGTCGAGC
ACGGCCCGCAATTGCCGCAT

Product: glycine/D-amino acid oxidase, deaminating

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 373; Mature: 373

Protein sequence:

>373_residues
MKKIVVIGGGILGSSTAYHLAKNGASVTLIDDNHHGKATQAAAGIVCPWLSKRRNQKWYRLVKQGAAYYPDLIKQLAALG
QKQTGYKQTGALWLHQDSKELAAAYERARQKQADAPEMGELTVLSPSETQTLFPPLSNDFGAVHVSGAARVDGSSLNKAL
QQAAQNLGATLIPAKATLVRESPRKLSVYADGKRVQGDEMVVACGAWAKELLAPVGIAVDVREQKAQIIHLHLETNTDEW
PVVMPPGNSYLLAFENGRIVAGTTHEDYPRFNTAVTAGGMHTILANALNVAPGLQKAEWLETRVGFRPVVPHFQPVFGLL
PGVEDVWFANGLGSSGLTTGPYIGMLLAQQMLGNRMSLDPEDYKVATILQDNR

Sequences:

>Translated_373_residues
MKKIVVIGGGILGSSTAYHLAKNGASVTLIDDNHHGKATQAAAGIVCPWLSKRRNQKWYRLVKQGAAYYPDLIKQLAALG
QKQTGYKQTGALWLHQDSKELAAAYERARQKQADAPEMGELTVLSPSETQTLFPPLSNDFGAVHVSGAARVDGSSLNKAL
QQAAQNLGATLIPAKATLVRESPRKLSVYADGKRVQGDEMVVACGAWAKELLAPVGIAVDVREQKAQIIHLHLETNTDEW
PVVMPPGNSYLLAFENGRIVAGTTHEDYPRFNTAVTAGGMHTILANALNVAPGLQKAEWLETRVGFRPVVPHFQPVFGLL
PGVEDVWFANGLGSSGLTTGPYIGMLLAQQMLGNRMSLDPEDYKVATILQDNR
>Mature_373_residues
MKKIVVIGGGILGSSTAYHLAKNGASVTLIDDNHHGKATQAAAGIVCPWLSKRRNQKWYRLVKQGAAYYPDLIKQLAALG
QKQTGYKQTGALWLHQDSKELAAAYERARQKQADAPEMGELTVLSPSETQTLFPPLSNDFGAVHVSGAARVDGSSLNKAL
QQAAQNLGATLIPAKATLVRESPRKLSVYADGKRVQGDEMVVACGAWAKELLAPVGIAVDVREQKAQIIHLHLETNTDEW
PVVMPPGNSYLLAFENGRIVAGTTHEDYPRFNTAVTAGGMHTILANALNVAPGLQKAEWLETRVGFRPVVPHFQPVFGLL
PGVEDVWFANGLGSSGLTTGPYIGMLLAQQMLGNRMSLDPEDYKVATILQDNR

Specific function: Unknown

COG id: COG0665

COG function: function code E; Glycine/D-amino acid oxidases (deaminating)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DadA oxidoreductase family [H]

Homologues:

Organism=Homo sapiens, GI194306651, Length=378, Percent_Identity=25.3968253968254, Blast_Score=65, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI71994045, Length=375, Percent_Identity=23.4666666666667, Blast_Score=69, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI71994052, Length=382, Percent_Identity=23.5602094240838, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI20130091, Length=360, Percent_Identity=24.7222222222222, Blast_Score=68, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006076 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: NA

Molecular weight: Translated: 40278; Mature: 40278

Theoretical pI: Translated: 8.91; Mature: 8.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIVVIGGGILGSSTAYHLAKNGASVTLIDDNHHGKATQAAAGIVCPWLSKRRNQKWYR
CCEEEEEECCEECCCCCEEEECCCCEEEEEECCCCCCHHHHHCCEECHHHHHHCCHHHHH
LVKQGAAYYPDLIKQLAALGQKQTGYKQTGALWLHQDSKELAAAYERARQKQADAPEMGE
HHHCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCC
LTVLSPSETQTLFPPLSNDFGAVHVSGAARVDGSSLNKALQQAAQNLGATLIPAKATLVR
EEEECCCCCCEECCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCEEECCHHHEEC
ESPRKLSVYADGKRVQGDEMVVACGAWAKELLAPVGIAVDVREQKAQIIHLHLETNTDEW
CCCCEEEEEECCCEECCCCEEEECCHHHHHHHHHCCEEEEECCCCEEEEEEEEECCCCCC
PVVMPPGNSYLLAFENGRIVAGTTHEDYPRFNTAVTAGGMHTILANALNVAPGLQKAEWL
CEEECCCCCEEEEEECCEEEECCCCCCCCCCCCEEECCCHHHHHHHHHHCCCCCCHHHHH
ETRVGFRPVVPHFQPVFGLLPGVEDVWFANGLGSSGLTTGPYIGMLLAQQMLGNRMSLDP
HHHCCCCCCCCCHHHHHHHCCCCHHHHEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC
EDYKVATILQDNR
CCEEEEEEEECCC
>Mature Secondary Structure
MKKIVVIGGGILGSSTAYHLAKNGASVTLIDDNHHGKATQAAAGIVCPWLSKRRNQKWYR
CCEEEEEECCEECCCCCEEEECCCCEEEEEECCCCCCHHHHHCCEECHHHHHHCCHHHHH
LVKQGAAYYPDLIKQLAALGQKQTGYKQTGALWLHQDSKELAAAYERARQKQADAPEMGE
HHHCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCC
LTVLSPSETQTLFPPLSNDFGAVHVSGAARVDGSSLNKALQQAAQNLGATLIPAKATLVR
EEEECCCCCCEECCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCEEECCHHHEEC
ESPRKLSVYADGKRVQGDEMVVACGAWAKELLAPVGIAVDVREQKAQIIHLHLETNTDEW
CCCCEEEEEECCCEECCCCEEEECCHHHHHHHHHCCEEEEECCCCEEEEEEEEECCCCCC
PVVMPPGNSYLLAFENGRIVAGTTHEDYPRFNTAVTAGGMHTILANALNVAPGLQKAEWL
CEEECCCCCEEEEEECCEEEECCCCCCCCCCCCEEECCCHHHHHHHHHHCCCCCCHHHHH
ETRVGFRPVVPHFQPVFGLLPGVEDVWFANGLGSSGLTTGPYIGMLLAQQMLGNRMSLDP
HHHCCCCCCCCCHHHHHHHCCCCHHHHEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC
EDYKVATILQDNR
CCEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]