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The map label for this gene is ykrA [H]

Identifier: 56964211

GI number: 56964211

Start: 2572946

End: 2573719

Strand: Direct

Name: ykrA [H]

Synonym: ABC2446

Alternate gene names: 56964211

Gene position: 2572946-2573719 (Clockwise)

Preceding gene: 56964207

Following gene: 56964220

Centisome position: 59.78

GC content: 43.41

Gene sequence:

>774_bases
ATGGAGAGAGCAACTATTTTTTTTGATATTGACGGTACGTTGCTAGATGAAGAGAAGCGCCTGCCGCAATCAACAAAGCA
AGCGATCGCTGCTTTAAAAGAGAAAGGACATGAAGTGGCCATTGCCACAGGGCGCGCGCCTTACTTTTTTAAGGAATTGC
GCGAAGAACTAGAGATCGATTCATATATTTGCTTTAATGGCCAATACGTCGTCTTTAAAGGGGAATTGATTTACGAAAAC
ACACTTGATATGGACGCATTTACCGAGATGGAGCGTTATGCGTCTTCGCAGGAGCACCCTCTAGTGTTTATGGGTTCAAA
AACGTATACCTCTAACCGTGAAGACCACCCTTATGTGATTAAAAGCATCAAGACATTAAAAATTGACTTGCCCCAATACA
ATCCTGATTTATACAACGAGCAACCGCTCCATCAAGCATTGCTCTTTTGTGAGGAAGGCGAAGAAAAAGACTATGAAACT
CGCTTTCCAGCGCTTCGCTTCGTCCGCTGGCATCCACTGTCTGTAGATGTGCTGCCTCGCGAAGGTTCAAAAGCAAATGG
CATTGCCAAATTTATTCAGCGCGCAAACATAGACTTGGCCAATGTTTATGCTTTCGGCGACCAATTAAATGATTTAGAAA
TGCTTTCATTTGTCGAGCATGGAGTAGCAATGGGCAATGCGCCTGAAAAAGTGAAAGCACAAGCCCGCTACGTAACAAAG
CCTGTGCATGAAAATGGCATTGATCATGGCTTAAAAATGGTTGGATTACTCTAA

Upstream 100 bases:

>100_bases
TACCCGCCAGCAGTGCCTATTAACCCCCTGTATCGCATTTGACAGGCAAAATCGAGTCATGTATTGTTTTCATTGACAGA
GTGAAGGAGGAATCGATCGG

Downstream 100 bases:

>100_bases
TAGACAAAGCCCATTCGAAACGGAGAATGGGCTTTTTGTCTGCTTTTCTGGTCACGGTTTGCCAAAATAAAAAACACATC
GACTGATGTGTTTTTTAAAA

Product: HAD superfamily hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MERATIFFDIDGTLLDEEKRLPQSTKQAIAALKEKGHEVAIATGRAPYFFKELREELEIDSYICFNGQYVVFKGELIYEN
TLDMDAFTEMERYASSQEHPLVFMGSKTYTSNREDHPYVIKSIKTLKIDLPQYNPDLYNEQPLHQALLFCEEGEEKDYET
RFPALRFVRWHPLSVDVLPREGSKANGIAKFIQRANIDLANVYAFGDQLNDLEMLSFVEHGVAMGNAPEKVKAQARYVTK
PVHENGIDHGLKMVGLL

Sequences:

>Translated_257_residues
MERATIFFDIDGTLLDEEKRLPQSTKQAIAALKEKGHEVAIATGRAPYFFKELREELEIDSYICFNGQYVVFKGELIYEN
TLDMDAFTEMERYASSQEHPLVFMGSKTYTSNREDHPYVIKSIKTLKIDLPQYNPDLYNEQPLHQALLFCEEGEEKDYET
RFPALRFVRWHPLSVDVLPREGSKANGIAKFIQRANIDLANVYAFGDQLNDLEMLSFVEHGVAMGNAPEKVKAQARYVTK
PVHENGIDHGLKMVGLL
>Mature_257_residues
MERATIFFDIDGTLLDEEKRLPQSTKQAIAALKEKGHEVAIATGRAPYFFKELREELEIDSYICFNGQYVVFKGELIYEN
TLDMDAFTEMERYASSQEHPLVFMGSKTYTSNREDHPYVIKSIKTLKIDLPQYNPDLYNEQPLHQALLFCEEGEEKDYET
RFPALRFVRWHPLSVDVLPREGSKANGIAKFIQRANIDLANVYAFGDQLNDLEMLSFVEHGVAMGNAPEKVKAQARYVTK
PVHENGIDHGLKMVGLL

Specific function: Unknown

COG id: COG0561

COG function: function code R; Predicted hydrolases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]

Homologues:

Organism=Escherichia coli, GI2367265, Length=276, Percent_Identity=28.2608695652174, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI48994981, Length=235, Percent_Identity=26.8085106382979, Blast_Score=75, Evalue=6e-15,
Organism=Escherichia coli, GI1787043, Length=271, Percent_Identity=28.0442804428044, Blast_Score=71, Evalue=7e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006379
- InterPro:   IPR000150 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 29444; Mature: 29444

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: PS01229 COF_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERATIFFDIDGTLLDEEKRLPQSTKQAIAALKEKGHEVAIATGRAPYFFKELREELEID
CCCEEEEEECCCCEECHHHCCCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHCCC
SYICFNGQYVVFKGELIYENTLDMDAFTEMERYASSQEHPLVFMGSKTYTSNREDHPYVI
CEEEECCEEEEEECEEEECCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCHHE
KSIKTLKIDLPQYNPDLYNEQPLHQALLFCEEGEEKDYETRFPALRFVRWHPLSVDVLPR
ECEEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHCCCEEEEEECCCEEEEECC
EGSKANGIAKFIQRANIDLANVYAFGDQLNDLEMLSFVEHGVAMGNAPEKVKAQARYVTK
CCCCCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHC
PVHENGIDHGLKMVGLL
CHHHCCHHHHHHHHCCC
>Mature Secondary Structure
MERATIFFDIDGTLLDEEKRLPQSTKQAIAALKEKGHEVAIATGRAPYFFKELREELEID
CCCEEEEEECCCCEECHHHCCCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHCCC
SYICFNGQYVVFKGELIYENTLDMDAFTEMERYASSQEHPLVFMGSKTYTSNREDHPYVI
CEEEECCEEEEEECEEEECCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCHHE
KSIKTLKIDLPQYNPDLYNEQPLHQALLFCEEGEEKDYETRFPALRFVRWHPLSVDVLPR
ECEEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHCCCEEEEEECCCEEEEECC
EGSKANGIAKFIQRANIDLANVYAFGDQLNDLEMLSFVEHGVAMGNAPEKVKAQARYVTK
CCCCCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHC
PVHENGIDHGLKMVGLL
CHHHCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]