Definition Bacillus clausii KSM-K16, complete genome.
Accession NC_006582
Length 4,303,871

Click here to switch to the map view.

The map label for this gene is ylbA [H]

Identifier: 56964152

GI number: 56964152

Start: 2513642

End: 2513995

Strand: Direct

Name: ylbA [H]

Synonym: ABC2387

Alternate gene names: 56964152

Gene position: 2513642-2513995 (Clockwise)

Preceding gene: 56964150

Following gene: 56964159

Centisome position: 58.4

GC content: 44.92

Gene sequence:

>354_bases
GTGAAATTTCCGGATACAGGACTTGAAGAAAAAGAAGTAGCATTTTCAATCGTGAATCACGCAGCCAAATCGCTCGGCTT
TATCCATGTCGACCAGTGGGACTACGAACGGGTTATGTTCGACTACAAAATCGTCCACCATGAAGGCACGTTTTATTTGC
GTGTCCCTGCCTATGCTGTGAAAGGAGAAATTCCACGGCCTTCCACGATTGTGCAAATTATGACGCCGATTCTTGGTAAG
TATTACTACCCTCACGGCGTCGAATACGAAGGGGAAACTTTCCCACAAGCAGTTATTGACAAATGCAATAACAAGTTGGC
TCTTCTCGCAAAGACGATTAAAGCTGAGTGGTAA

Upstream 100 bases:

>100_bases
TACATCCAGTCTAGGAAAATTGCGTTTCCCGTTGCATAAGAAAGCGTTTCATACTATCATTAGGAATGAGAAACAGCTGT
CGAATGAAGGGGGAAAACCT

Downstream 100 bases:

>100_bases
GGAGCGAGCCGCTTCATCTTTACAAAAAAGGACGAGATGCTACAGGAGTAGGATCTCGCCTTATTTTTTTGCCAAAATAA
CTTTAGAGACCGATAAATCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 117; Mature: 117

Protein sequence:

>117_residues
MKFPDTGLEEKEVAFSIVNHAAKSLGFIHVDQWDYERVMFDYKIVHHEGTFYLRVPAYAVKGEIPRPSTIVQIMTPILGK
YYYPHGVEYEGETFPQAVIDKCNNKLALLAKTIKAEW

Sequences:

>Translated_117_residues
MKFPDTGLEEKEVAFSIVNHAAKSLGFIHVDQWDYERVMFDYKIVHHEGTFYLRVPAYAVKGEIPRPSTIVQIMTPILGK
YYYPHGVEYEGETFPQAVIDKCNNKLALLAKTIKAEW
>Mature_117_residues
MKFPDTGLEEKEVAFSIVNHAAKSLGFIHVDQWDYERVMFDYKIVHHEGTFYLRVPAYAVKGEIPRPSTIVQIMTPILGK
YYYPHGVEYEGETFPQAVIDKCNNKLALLAKTIKAEW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014967 [H]

Pfam domain/function: PF08868 YugN [H]

EC number: NA

Molecular weight: Translated: 13494; Mature: 13494

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFPDTGLEEKEVAFSIVNHAAKSLGFIHVDQWDYERVMFDYKIVHHEGTFYLRVPAYAV
CCCCCCCCCHHHHHHHHHHHHHHHCCEEEECCCCCHHEEEEEEEEEECCEEEEEECCEEE
KGEIPRPSTIVQIMTPILGKYYYPHGVEYEGETFPQAVIDKCNNKLALLAKTIKAEW
CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCEEHHHHHHCCC
>Mature Secondary Structure
MKFPDTGLEEKEVAFSIVNHAAKSLGFIHVDQWDYERVMFDYKIVHHEGTFYLRVPAYAV
CCCCCCCCCHHHHHHHHHHHHHHHCCEEEECCCCCHHEEEEEEEEEECCEEEEEECCEEE
KGEIPRPSTIVQIMTPILGKYYYPHGVEYEGETFPQAVIDKCNNKLALLAKTIKAEW
CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCEEHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]