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The map label for this gene is xerC [H]

Identifier: 56963947

GI number: 56963947

Start: 2306123

End: 2307130

Strand: Direct

Name: xerC [H]

Synonym: ABC2182

Alternate gene names: 56963947

Gene position: 2306123-2307130 (Clockwise)

Preceding gene: 56963943

Following gene: 56963956

Centisome position: 53.58

GC content: 48.81

Gene sequence:

>1008_bases
ATGGATGGGTTTCAATGGGTAGAGCGCTTCACATATGCTCTTGCTGACAAGGGACGGCGGCCGTCAACCGTTAGGCGTTA
CCGCTATGATTTGCTTGACTTTTTCAAGTGGCTCGACGATAAAGACTTCCATTCTATGGAGCAAACGGATGCAGAGCGTT
ACTTTTATGAATTGATAGAGAGTCGTTCCTATCAAACACGAACCATCCGCCGCGTCGCTTCCGTACTCAGGCAATTCACC
GCCTTTTTAATGGCAGAAAAACAGCTGGCGAGTCATCCACTCCTCACCTATGACCCACCGCCTTTAGAGGCTGAGCCGCT
TCAACCTCACGAATGGGTCAATGCGAAGGAGATCGCTGCGATCTTGCGTTCAAGTCAATCAGAAGAAGGGTTGACGGACA
ATCAGCTGCTTGCAAGGCCGCAACTGACAAAACGAAACTTTGCGATGTTTTTGCTTCTTGCCCATTATGGCCTCACATTG
CAAGAACTTTGTGACCTGCAAATGAATGATGTCAATTTTGTAAAAGGGACGTTGCTCATTCGCAGAGACAGCGGCCACGA
CCGTCAGCTTGTACTTTGCCCCAAATACGCCAAGCAGTTGCATGCTTATTGGACGCTTATCCCTGAACCGGTACGGCCAC
GTTTACACACGGATGACCCATTGTTTGTCGCTTTTGATTTTACAAGGCGCACATACCATTGGTCCTATGAAAACGACGCG
CCTAAAGCGTTGACGGAAATTGCCTTGCAGAAAATGATCCGCACAGAAGTGGCGCGGGCTGGCTTGCGCAAAGGCATCTC
CGCTCAGCATTTTCGTCATTCCTTTTTGCTCAAGTTAATGCTCGCAGGGGAACAGTGGACAACGATTCAGCAAAAAGCAG
GGCTAAAAAGCATGCTTTCCTTGCGGCGCTATGCTTTAACGGTCGAAAAAATGAACGTTGCTAGAAGACAAGAGCTTCTT
CCGACAGCTGCAGAAACTGAGGCAGACTCCCATCTAAGTAGTTCATAG

Upstream 100 bases:

>100_bases
TTCGAGCAAGTACTTCGCTTTGCAAAGCAAATGACTTATTATCTGTTCGTGACGGAGCTGGAGGGATTTGGTACAATTTT
CTTGAAAGGGGGGGCTTTGT

Downstream 100 bases:

>100_bases
CAAGCTGGCTTTATAAAGAGCATTTTAGACAACTAAAAAACGGGATGAAAATCGTTGTTTTCATCCCGTCCTTGGAAAGA
ACCGTTTTTATGGTTGCTAT

Product: phage integrase family site specific recombinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 335; Mature: 335

Protein sequence:

>335_residues
MDGFQWVERFTYALADKGRRPSTVRRYRYDLLDFFKWLDDKDFHSMEQTDAERYFYELIESRSYQTRTIRRVASVLRQFT
AFLMAEKQLASHPLLTYDPPPLEAEPLQPHEWVNAKEIAAILRSSQSEEGLTDNQLLARPQLTKRNFAMFLLLAHYGLTL
QELCDLQMNDVNFVKGTLLIRRDSGHDRQLVLCPKYAKQLHAYWTLIPEPVRPRLHTDDPLFVAFDFTRRTYHWSYENDA
PKALTEIALQKMIRTEVARAGLRKGISAQHFRHSFLLKLMLAGEQWTTIQQKAGLKSMLSLRRYALTVEKMNVARRQELL
PTAAETEADSHLSSS

Sequences:

>Translated_335_residues
MDGFQWVERFTYALADKGRRPSTVRRYRYDLLDFFKWLDDKDFHSMEQTDAERYFYELIESRSYQTRTIRRVASVLRQFT
AFLMAEKQLASHPLLTYDPPPLEAEPLQPHEWVNAKEIAAILRSSQSEEGLTDNQLLARPQLTKRNFAMFLLLAHYGLTL
QELCDLQMNDVNFVKGTLLIRRDSGHDRQLVLCPKYAKQLHAYWTLIPEPVRPRLHTDDPLFVAFDFTRRTYHWSYENDA
PKALTEIALQKMIRTEVARAGLRKGISAQHFRHSFLLKLMLAGEQWTTIQQKAGLKSMLSLRRYALTVEKMNVARRQELL
PTAAETEADSHLSSS
>Mature_335_residues
MDGFQWVERFTYALADKGRRPSTVRRYRYDLLDFFKWLDDKDFHSMEQTDAERYFYELIESRSYQTRTIRRVASVLRQFT
AFLMAEKQLASHPLLTYDPPPLEAEPLQPHEWVNAKEIAAILRSSQSEEGLTDNQLLARPQLTKRNFAMFLLLAHYGLTL
QELCDLQMNDVNFVKGTLLIRRDSGHDRQLVLCPKYAKQLHAYWTLIPEPVRPRLHTDDPLFVAFDFTRRTYHWSYENDA
PKALTEIALQKMIRTEVARAGLRKGISAQHFRHSFLLKLMLAGEQWTTIQQKAGLKSMLSLRRYALTVEKMNVARRQELL
PTAAETEADSHLSSS

Specific function: Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The xerC-xerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell div

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family. XerC subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR010998
- InterPro:   IPR023109
- InterPro:   IPR004107
- InterPro:   IPR011931 [H]

Pfam domain/function: PF02899 Phage_integr_N; PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 39168; Mature: 39168

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDGFQWVERFTYALADKGRRPSTVRRYRYDLLDFFKWLDDKDFHSMEQTDAERYFYELIE
CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
SRSYQTRTIRRVASVLRQFTAFLMAEKQLASHPLLTYDPPPLEAEPLQPHEWVNAKEIAA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCHHCCCHHHHHH
ILRSSQSEEGLTDNQLLARPQLTKRNFAMFLLLAHYGLTLQELCDLQMNDVNFVKGTLLI
HHHCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCEEEEEEEE
RRDSGHDRQLVLCPKYAKQLHAYWTLIPEPVRPRLHTDDPLFVAFDFTRRTYHWSYENDA
EECCCCCCEEEECHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCEEEECCCCCH
PKALTEIALQKMIRTEVARAGLRKGISAQHFRHSFLLKLMLAGEQWTTIQQKAGLKSMLS
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
LRRYALTVEKMNVARRQELLPTAAETEADSHLSSS
HHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHCCCC
>Mature Secondary Structure
MDGFQWVERFTYALADKGRRPSTVRRYRYDLLDFFKWLDDKDFHSMEQTDAERYFYELIE
CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
SRSYQTRTIRRVASVLRQFTAFLMAEKQLASHPLLTYDPPPLEAEPLQPHEWVNAKEIAA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCHHCCCHHHHHH
ILRSSQSEEGLTDNQLLARPQLTKRNFAMFLLLAHYGLTLQELCDLQMNDVNFVKGTLLI
HHHCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCEEEEEEEE
RRDSGHDRQLVLCPKYAKQLHAYWTLIPEPVRPRLHTDDPLFVAFDFTRRTYHWSYENDA
EECCCCCCEEEECHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCEEEECCCCCH
PKALTEIALQKMIRTEVARAGLRKGISAQHFRHSFLLKLMLAGEQWTTIQQKAGLKSMLS
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
LRRYALTVEKMNVARRQELLPTAAETEADSHLSSS
HHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA