| Definition | Bacillus clausii KSM-K16, complete genome. |
|---|---|
| Accession | NC_006582 |
| Length | 4,303,871 |
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The map label for this gene is ytvI [H]
Identifier: 56963750
GI number: 56963750
Start: 2096503
End: 2097639
Strand: Direct
Name: ytvI [H]
Synonym: ABC1985
Alternate gene names: 56963750
Gene position: 2096503-2097639 (Clockwise)
Preceding gene: 56963749
Following gene: 56963752
Centisome position: 48.71
GC content: 44.42
Gene sequence:
>1137_bases GTGAACCTGTTGTCCCGAGACGTTGCTTGGATGATTGGCCGAACGATTGCCATTGTTGTTTTTCTTATAGGTTCTTTATG GGTGTTCGCAAAGGTCTTCTCGCTTACATACCCTTTTTGGTTTGCGGCTTTGTTTGCCTGGATGCTACAGCCAGTCGCCC GTTTCTTTCAACAAAAGCTGCGCTTCAGCCGTGGTTTTGCCAGTTTGTTTGGTTTGCTCGGCGGAATCTTGGTCATTAGC GCGATTCTAACGGGGTTGGTTTTTCTTATTTATTTTAGTTTGCGCCAATTTTTTGAGCAAGTACCAACGTGGATTGAAGA AGGCTCTGAAAAAATGCAAATCTTCTTTAATGAGACGGTTTGGCCGTACTGGCAACAAGTACTTGGCTTGTTTGATACGA TCGATGTAGGCACACACAATGTTCTGTCGGAAGGAATTGACCAGTTAGGGACAGTGCTTGGCAATTTTCTTGGCGATATC GGGCAGGGGGTTGTTGACTTTTTAACAACCGCGCTCTTAGGGTTACCGAACTTTTTGGTGGCGTTTCTGTTTATCATTTT GAGCATTTATTTTATGGGGAAAAGTTGGAGTTATTACCAGGATGTTTATGATCGCCATGTGCCACTACGGTTGCGTAAAA AAGGCAAAGAGTTCGTACAAGCGATCCGGCGGAGGCTGTTTGGCTTTCTTCGAGCCCAGTTCATCCTCATGTTTGTCACC GCTTGTATTGTCTTTGTCGGCCTTTTGATCATTCAGATTGACAATGCGTGGATGCTTGCCATTGTCGTCGGAATTGCTGA GCTGCTTCCTTATTTAGGGACTGGCACGATCTTAATTCCTTGGTTTATTTACTTGTTTATCACAGGCGATGTGTCTGGCG GTTTCGGGATTGCGATTTTATACATCATTGTCGTCATCATCCGGCAACTACTTGAACCAAAAGTGCTTTCAAGTCATATG AACTTAAATCCAATTGCAGTCTTGATTTCTTTGTTTGCCGGCCTCCGCTTGTTCGGTGCATTCGGCTTGTTTTTAGGCCC TGCTATTTTGGTGTTCATCGTAATTTTGAATGACATTGGCTTTTTTCGAGCCGTCCTTCAGTTTATCCGCAACGGTTTTA CTGAACCCGAGCAATAG
Upstream 100 bases:
>100_bases CCGCCCCACTCCGTTTTTTTAGGTGTCATTTGACAGCATGCTTTGTCAAGAACTACAATAATCTCGTTACCTGTTTTGGC GATGTTTACATGAAAAGAAG
Downstream 100 bases:
>100_bases CCCGCTCCGATGAGCGGGCTATTGCTTTGGCCAATCTTGTTCATTTGTTGAATCGGAGGACGCGTCCTCCCCTGATTGAT GGCTTGCCTGTTGTTCTTGT
Product: transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 378; Mature: 378
Protein sequence:
>378_residues MNLLSRDVAWMIGRTIAIVVFLIGSLWVFAKVFSLTYPFWFAALFAWMLQPVARFFQQKLRFSRGFASLFGLLGGILVIS AILTGLVFLIYFSLRQFFEQVPTWIEEGSEKMQIFFNETVWPYWQQVLGLFDTIDVGTHNVLSEGIDQLGTVLGNFLGDI GQGVVDFLTTALLGLPNFLVAFLFIILSIYFMGKSWSYYQDVYDRHVPLRLRKKGKEFVQAIRRRLFGFLRAQFILMFVT ACIVFVGLLIIQIDNAWMLAIVVGIAELLPYLGTGTILIPWFIYLFITGDVSGGFGIAILYIIVVIIRQLLEPKVLSSHM NLNPIAVLISLFAGLRLFGAFGLFLGPAILVFIVILNDIGFFRAVLQFIRNGFTEPEQ
Sequences:
>Translated_378_residues MNLLSRDVAWMIGRTIAIVVFLIGSLWVFAKVFSLTYPFWFAALFAWMLQPVARFFQQKLRFSRGFASLFGLLGGILVIS AILTGLVFLIYFSLRQFFEQVPTWIEEGSEKMQIFFNETVWPYWQQVLGLFDTIDVGTHNVLSEGIDQLGTVLGNFLGDI GQGVVDFLTTALLGLPNFLVAFLFIILSIYFMGKSWSYYQDVYDRHVPLRLRKKGKEFVQAIRRRLFGFLRAQFILMFVT ACIVFVGLLIIQIDNAWMLAIVVGIAELLPYLGTGTILIPWFIYLFITGDVSGGFGIAILYIIVVIIRQLLEPKVLSSHM NLNPIAVLISLFAGLRLFGAFGLFLGPAILVFIVILNDIGFFRAVLQFIRNGFTEPEQ >Mature_378_residues MNLLSRDVAWMIGRTIAIVVFLIGSLWVFAKVFSLTYPFWFAALFAWMLQPVARFFQQKLRFSRGFASLFGLLGGILVIS AILTGLVFLIYFSLRQFFEQVPTWIEEGSEKMQIFFNETVWPYWQQVLGLFDTIDVGTHNVLSEGIDQLGTVLGNFLGDI GQGVVDFLTTALLGLPNFLVAFLFIILSIYFMGKSWSYYQDVYDRHVPLRLRKKGKEFVQAIRRRLFGFLRAQFILMFVT ACIVFVGLLIIQIDNAWMLAIVVGIAELLPYLGTGTILIPWFIYLFITGDVSGGFGIAILYIIVVIIRQLLEPKVLSSHM NLNPIAVLISLFAGLRLFGAFGLFLGPAILVFIVILNDIGFFRAVLQFIRNGFTEPEQ
Specific function: Unknown
COG id: COG0628
COG function: function code R; Predicted permease
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0118 (perM) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014227 - InterPro: IPR002549 [H]
Pfam domain/function: PF01594 UPF0118 [H]
EC number: NA
Molecular weight: Translated: 42842; Mature: 42842
Theoretical pI: Translated: 9.21; Mature: 9.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLLSRDVAWMIGRTIAIVVFLIGSLWVFAKVFSLTYPFWFAALFAWMLQPVARFFQQKL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RFSRGFASLFGLLGGILVISAILTGLVFLIYFSLRQFFEQVPTWIEEGSEKMQIFFNETV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCC WPYWQQVLGLFDTIDVGTHNVLSEGIDQLGTVLGNFLGDIGQGVVDFLTTALLGLPNFLV CHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH AFLFIILSIYFMGKSWSYYQDVYDRHVPLRLRKKGKEFVQAIRRRLFGFLRAQFILMFVT HHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ACIVFVGLLIIQIDNAWMLAIVVGIAELLPYLGTGTILIPWFIYLFITGDVSGGFGIAIL HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHH YIIVVIIRQLLEPKVLSSHMNLNPIAVLISLFAGLRLFGAFGLFLGPAILVFIVILNDIG HHHHHHHHHHHCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FFRAVLQFIRNGFTEPEQ HHHHHHHHHHCCCCCCCC >Mature Secondary Structure MNLLSRDVAWMIGRTIAIVVFLIGSLWVFAKVFSLTYPFWFAALFAWMLQPVARFFQQKL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RFSRGFASLFGLLGGILVISAILTGLVFLIYFSLRQFFEQVPTWIEEGSEKMQIFFNETV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCC WPYWQQVLGLFDTIDVGTHNVLSEGIDQLGTVLGNFLGDIGQGVVDFLTTALLGLPNFLV CHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH AFLFIILSIYFMGKSWSYYQDVYDRHVPLRLRKKGKEFVQAIRRRLFGFLRAQFILMFVT HHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ACIVFVGLLIIQIDNAWMLAIVVGIAELLPYLGTGTILIPWFIYLFITGDVSGGFGIAIL HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHH YIIVVIIRQLLEPKVLSSHMNLNPIAVLISLFAGLRLFGAFGLFLGPAILVFIVILNDIG HHHHHHHHHHHCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FFRAVLQFIRNGFTEPEQ HHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9387221; 9384377 [H]