Click here to switch to the map view.

The map label for this gene is qcrB [H]

Identifier: 56963673

GI number: 56963673

Start: 2024786

End: 2025457

Strand: Direct

Name: qcrB [H]

Synonym: ABC1908

Alternate gene names: 56963673

Gene position: 2024786-2025457 (Clockwise)

Preceding gene: 56963672

Following gene: 56963674

Centisome position: 47.05

GC content: 45.54

Gene sequence:

>672_bases
ATGCTTCAAAAAATTTATGATTATGTGGACGAGCGTCTCGACATAACGCCAATGTGGCGGGATATCGCTGACCATGAAGT
GCCAGAGCACGTCAACCCAGCTCATCACTTTTCGGCGTTTATTTATTGTTTTGGCGGTTTGACGTTTTTTGTAACCGTTA
TTCAAATTTTGTCGGGAATGTTCCTTACCATGTACTACGTACCGGACATTGTGAATGCCCATGCATCTGTTTACTTTTTG
CAAAACGATGTAGCAATGGGTGTCATAGTCCGCGGCATGCACCATTGGGGCGCCAGCCTTGTTATTGTCATGATGTTTTT
ACATACGTTGCGCGTGTTCTTTACCGGCTCGTACAAAAAGCCACGTGAATTAAACTGGGTTGTAGGAGTATTGATTTTCT
TTGTGATGCTTGGCCTTGGCTTAACAGGCTATTTGTTGCCTTGGGATATGAAAGCATACTTTGCAACTGTCGTCACACTT
CAAATTGCTGAAAGCGTACCGATCATCGGCGACTTTACAAAAGCGTTGCTTGCCGGAGGCGAAATTGTCGGTGCTGCGAC
GTTGACGCGCTTTTTTGCTATCCATGTCTTCTTCTTGCCAGCAGCATTGCTTGGTTTGCTTGGGGCGCATTTTATCATGA
TTCGCCGTCAAGGCATTTCTGGCCCGCTATAA

Upstream 100 bases:

>100_bases
CGCCACCAACGCGACCACTTGATGTTTTTGAAGTCGTGGTGGAAGGCAATCAAGTTTATCTTGGACAGGTGAGTCAAAGA
ACTTAGGAGGGGCGCGAGAA

Downstream 100 bases:

>100_bases
TTGTTAGCTAATATGTGATTATACTAAGGGGGGAAACCCATGCATCGAGGAAAAGGAATGAAGTTTGTCGGCGATTCCCG
TGTTAAAGCGGATGGCCGAA

Product: cytochrome b6

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MLQKIYDYVDERLDITPMWRDIADHEVPEHVNPAHHFSAFIYCFGGLTFFVTVIQILSGMFLTMYYVPDIVNAHASVYFL
QNDVAMGVIVRGMHHWGASLVIVMMFLHTLRVFFTGSYKKPRELNWVVGVLIFFVMLGLGLTGYLLPWDMKAYFATVVTL
QIAESVPIIGDFTKALLAGGEIVGAATLTRFFAIHVFFLPAALLGLLGAHFIMIRRQGISGPL

Sequences:

>Translated_223_residues
MLQKIYDYVDERLDITPMWRDIADHEVPEHVNPAHHFSAFIYCFGGLTFFVTVIQILSGMFLTMYYVPDIVNAHASVYFL
QNDVAMGVIVRGMHHWGASLVIVMMFLHTLRVFFTGSYKKPRELNWVVGVLIFFVMLGLGLTGYLLPWDMKAYFATVVTL
QIAESVPIIGDFTKALLAGGEIVGAATLTRFFAIHVFFLPAALLGLLGAHFIMIRRQGISGPL
>Mature_223_residues
MLQKIYDYVDERLDITPMWRDIADHEVPEHVNPAHHFSAFIYCFGGLTFFVTVIQILSGMFLTMYYVPDIVNAHASVYFL
QNDVAMGVIVRGMHHWGASLVIVMMFLHTLRVFFTGSYKKPRELNWVVGVLIFFVMLGLGLTGYLLPWDMKAYFATVVTL
QIAESVPIIGDFTKALLAGGEIVGAATLTRFFAIHVFFLPAALLGLLGAHFIMIRRQGISGPL

Specific function: Component of the menaquinol-cytochrome c reductase complex [H]

COG id: COG1290

COG function: function code C; Cytochrome b subunit of the bc complex

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome b family [H]

Homologues:

Organism=Homo sapiens, GI251831119, Length=182, Percent_Identity=31.8681318681319, Blast_Score=103, Evalue=2e-22,
Organism=Saccharomyces cerevisiae, GI6226532, Length=202, Percent_Identity=30.6930693069307, Blast_Score=92, Evalue=7e-20,
Organism=Saccharomyces cerevisiae, GI6226529, Length=202, Percent_Identity=30.6930693069307, Blast_Score=92, Evalue=8e-20,
Organism=Saccharomyces cerevisiae, GI6226531, Length=159, Percent_Identity=30.8176100628931, Blast_Score=72, Evalue=5e-14,
Organism=Saccharomyces cerevisiae, GI6226530, Length=123, Percent_Identity=34.9593495934959, Blast_Score=63, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016175
- InterPro:   IPR005797
- InterPro:   IPR016174 [H]

Pfam domain/function: PF00033 Cytochrom_B_N [H]

EC number: NA

Molecular weight: Translated: 25063; Mature: 25063

Theoretical pI: Translated: 7.08; Mature: 7.08

Prosite motif: PS51002 CYTB_NTER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQKIYDYVDERLDITPMWRDIADHEVPEHVNPAHHFSAFIYCFGGLTFFVTVIQILSGM
CHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLTMYYVPDIVNAHASVYFLQNDVAMGVIVRGMHHWGASLVIVMMFLHTLRVFFTGSYKK
HHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PRELNWVVGVLIFFVMLGLGLTGYLLPWDMKAYFATVVTLQIAESVPIIGDFTKALLAGG
CHHHHHHHHHHHHHHHHHHCHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC
EIVGAATLTRFFAIHVFFLPAALLGLLGAHFIMIRRQGISGPL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MLQKIYDYVDERLDITPMWRDIADHEVPEHVNPAHHFSAFIYCFGGLTFFVTVIQILSGM
CHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLTMYYVPDIVNAHASVYFLQNDVAMGVIVRGMHHWGASLVIVMMFLHTLRVFFTGSYKK
HHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PRELNWVVGVLIFFVMLGLGLTGYLLPWDMKAYFATVVTLQIAESVPIIGDFTKALLAGG
CHHHHHHHHHHHHHHHHHHCHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC
EIVGAATLTRFFAIHVFFLPAALLGLLGAHFIMIRRQGISGPL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7592464; 8760912; 9384377 [H]