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The map label for this gene is ypiA [H]

Identifier: 56963669

GI number: 56963669

Start: 2021661

End: 2022944

Strand: Direct

Name: ypiA [H]

Synonym: ABC1904

Alternate gene names: 56963669

Gene position: 2021661-2022944 (Clockwise)

Preceding gene: 56963668

Following gene: 56963670

Centisome position: 46.97

GC content: 44.7

Gene sequence:

>1284_bases
ATGCAAAAGGAGCATGATGTTTTTGTGGACATAAAAAAGAAAATTTATGCGTCAATTGAATCTGGGAATGTAGAAGAAGC
ACTCCGTTTGCTAAATGCGTTTGCGGATACAACGAACCATGACCAGCTCTACCAAGCAGCAGAGCTTTATTATGAGCTAG
GGCATGTCGATAAAGCACGGCCGCTCATTGAACAATTGCTCGAATTATACCCTGATGAAGGGGAGTTGTACGTTTTGGCA
GCAGAAATGATGATTGACGCCGACCAAGAAGACGAAGCGATTGAGTATTTATTAGAGATCGGCGAAAACGATCCAAGTTT
TTTACAAGCACAATTGCTGCTTGCTGATTTATACCAGTTGCAGTCTCTTGATGAAGCAGCCGAGCAAAGACTGCTCGCGG
CCCATAAAAAAGCGCCTAATGAGGTCATCATTACGTATGCACTCGGTGAATTTTATCTTGAACAAGGTTCATATAATAAA
GCTATCCCGTATTTAAAACAGGCATTGCATGCAAAAGAGGAACTCGGTGACATAAATGTCGGTTTGGCGCTTGCCGAAGC
TTATGGGGCTAATGGCCAGTTTGAAGACGCGCTCTTGCTATACCACCAGCAAAAACAGAATGAACTGCCGCCGAATGCAT
TGTTTAATTTTGGTTTCACCGCTTTTCAGCAAGGTGATTACACGGTGGCGATTGAACAGCTTGAGGCTGTAAAAACACTC
GATCCTGATTTCACAAGTGTCTATGTGCCGCTTGCACGCGCTTATGAAGCGGAAAAGCGTTATGAGGAAGCATTTGAAAC
ATTGGCCGCGGGCATGCGTATGGATGAATTTAATGATGCGCTGCCATTGCTTGCCGGGAAACTGCTGTATAAACAACAGG
ATTTTGTCGGTGCTGAACAATACTTGCGCCAGGCAATTGCTTTAAATCCAACAAATACAGAGGCGTTGCAAACATTAGCA
GCGTTTTTGCGGGAACAAGAACGATTTGACGAGCTGCTGGAGCTTGTCGAACATGCGAAGTCCTACGGGGAAACAGATGC
GCTGCTCGTTTGGTACGAAGCACTCGCTCATAAAGAGCTGGAGTATTATGAAACGGCACGGGAAAAATACAAAGAGGCCT
ATATTGCTTTTCATGAAGATGCAGATTTTCTAAGCGAGTATGGTCACTTTCTCTTGGAAGAGGGAGAGCGAAACAAGGCA
GTAGAACTTTTTCAAAAAGCGCTGCAACAAAGCCCTGAGCGGAGTGATTTGTCAGAACTCCTCGATGAATTGCAAGCAGA
GTAG

Upstream 100 bases:

>100_bases
TTGTCAACAGGTTTTGCCATAAAAGATTTTTTTAAAAACGATGGGCAAACAGAATGGTTGAAAGGGCGCAATTGCTTACT
ATAAAATAAAGGCAAGAAGC

Downstream 100 bases:

>100_bases
CATGTTACAGCGTGATTTGTAGAAAACGAATTGTGGCTAGAAAAAGGATTCAGGCAATGGCAAGGCGAATTTACAGGTAT
GCAGGAGCTAGGAAAGTTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 427; Mature: 427

Protein sequence:

>427_residues
MQKEHDVFVDIKKKIYASIESGNVEEALRLLNAFADTTNHDQLYQAAELYYELGHVDKARPLIEQLLELYPDEGELYVLA
AEMMIDADQEDEAIEYLLEIGENDPSFLQAQLLLADLYQLQSLDEAAEQRLLAAHKKAPNEVIITYALGEFYLEQGSYNK
AIPYLKQALHAKEELGDINVGLALAEAYGANGQFEDALLLYHQQKQNELPPNALFNFGFTAFQQGDYTVAIEQLEAVKTL
DPDFTSVYVPLARAYEAEKRYEEAFETLAAGMRMDEFNDALPLLAGKLLYKQQDFVGAEQYLRQAIALNPTNTEALQTLA
AFLREQERFDELLELVEHAKSYGETDALLVWYEALAHKELEYYETAREKYKEAYIAFHEDADFLSEYGHFLLEEGERNKA
VELFQKALQQSPERSDLSELLDELQAE

Sequences:

>Translated_427_residues
MQKEHDVFVDIKKKIYASIESGNVEEALRLLNAFADTTNHDQLYQAAELYYELGHVDKARPLIEQLLELYPDEGELYVLA
AEMMIDADQEDEAIEYLLEIGENDPSFLQAQLLLADLYQLQSLDEAAEQRLLAAHKKAPNEVIITYALGEFYLEQGSYNK
AIPYLKQALHAKEELGDINVGLALAEAYGANGQFEDALLLYHQQKQNELPPNALFNFGFTAFQQGDYTVAIEQLEAVKTL
DPDFTSVYVPLARAYEAEKRYEEAFETLAAGMRMDEFNDALPLLAGKLLYKQQDFVGAEQYLRQAIALNPTNTEALQTLA
AFLREQERFDELLELVEHAKSYGETDALLVWYEALAHKELEYYETAREKYKEAYIAFHEDADFLSEYGHFLLEEGERNKA
VELFQKALQQSPERSDLSELLDELQAE
>Mature_427_residues
MQKEHDVFVDIKKKIYASIESGNVEEALRLLNAFADTTNHDQLYQAAELYYELGHVDKARPLIEQLLELYPDEGELYVLA
AEMMIDADQEDEAIEYLLEIGENDPSFLQAQLLLADLYQLQSLDEAAEQRLLAAHKKAPNEVIITYALGEFYLEQGSYNK
AIPYLKQALHAKEELGDINVGLALAEAYGANGQFEDALLLYHQQKQNELPPNALFNFGFTAFQQGDYTVAIEQLEAVKTL
DPDFTSVYVPLARAYEAEKRYEEAFETLAAGMRMDEFNDALPLLAGKLLYKQQDFVGAEQYLRQAIALNPTNTEALQTLA
AFLREQERFDELLELVEHAKSYGETDALLVWYEALAHKELEYYETAREKYKEAYIAFHEDADFLSEYGHFLLEEGERNKA
VELFQKALQQSPERSDLSELLDELQAE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 9 TPR repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001440
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: PF00515 TPR_1 [H]

EC number: NA

Molecular weight: Translated: 48780; Mature: 48780

Theoretical pI: Translated: 4.06; Mature: 4.06

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKEHDVFVDIKKKIYASIESGNVEEALRLLNAFADTTNHDQLYQAAELYYELGHVDKAR
CCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHH
PLIEQLLELYPDEGELYVLAAEMMIDADQEDEAIEYLLEIGENDPSFLQAQLLLADLYQL
HHHHHHHHHCCCCCCEEEEEHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
QSLDEAAEQRLLAAHKKAPNEVIITYALGEFYLEQGSYNKAIPYLKQALHAKEELGDINV
HHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHH
GLALAEAYGANGQFEDALLLYHQQKQNELPPNALFNFGFTAFQQGDYTVAIEQLEAVKTL
HHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHCCCHHEECCCEEEHHHHHHHHHHC
DPDFTSVYVPLARAYEAEKRYEEAFETLAAGMRMDEFNDALPLLAGKLLYKQQDFVGAEQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHH
YLRQAIALNPTNTEALQTLAAFLREQERFDELLELVEHAKSYGETDALLVWYEALAHKEL
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
EYYETAREKYKEAYIAFHEDADFLSEYGHFLLEEGERNKAVELFQKALQQSPERSDLSEL
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHH
LDELQAE
HHHHCCC
>Mature Secondary Structure
MQKEHDVFVDIKKKIYASIESGNVEEALRLLNAFADTTNHDQLYQAAELYYELGHVDKAR
CCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHH
PLIEQLLELYPDEGELYVLAAEMMIDADQEDEAIEYLLEIGENDPSFLQAQLLLADLYQL
HHHHHHHHHCCCCCCEEEEEHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
QSLDEAAEQRLLAAHKKAPNEVIITYALGEFYLEQGSYNKAIPYLKQALHAKEELGDINV
HHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHH
GLALAEAYGANGQFEDALLLYHQQKQNELPPNALFNFGFTAFQQGDYTVAIEQLEAVKTL
HHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHCCCHHEECCCEEEHHHHHHHHHHC
DPDFTSVYVPLARAYEAEKRYEEAFETLAAGMRMDEFNDALPLLAGKLLYKQQDFVGAEQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHH
YLRQAIALNPTNTEALQTLAAFLREQERFDELLELVEHAKSYGETDALLVWYEALAHKEL
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
EYYETAREKYKEAYIAFHEDADFLSEYGHFLLEEGERNKAVELFQKALQQSPERSDLSEL
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHH
LDELQAE
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]