| Definition | Bacillus clausii KSM-K16, complete genome. |
|---|---|
| Accession | NC_006582 |
| Length | 4,303,871 |
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The map label for this gene is mtnW
Identifier: 56963540
GI number: 56963540
Start: 1895864
End: 1896988
Strand: Direct
Name: mtnW
Synonym: ABC1775
Alternate gene names: 56963540
Gene position: 1895864-1896988 (Clockwise)
Preceding gene: 56963539
Following gene: 56963542
Centisome position: 44.05
GC content: 48.18
Gene sequence:
>1125_bases GTGGCACAAATAAATGCGGTGTACTATGTAAGTGATTCAAATGAATTTATTGAGGAAAAAGCAGAGAAAATGGCCACTGG GCTCACGGCTAAGCCTTGGCAAGAAATGCCTGAAGCTGAGAAACAAGAAAGCTTTGCTTATAAAGGAAAAGTCGTTTCCA TTAACGAGGACCCCTCTTACGGGGAAGGCAGCATTGTGACGATTTCATTCCCCGTTGCCTATGAAGTGCCAGACTTTCCC TCCATTTTAACAACGACATATGGCCGGTTGTCTTACGAACCGAATGTAAAACTGCTTGATTTGCAGTTTTCAAACGACTT AGTGGAGAGATTTCCAGGACCGCTCTATGGCATTGAGGGAATCCGTGATCTCGTGGAAGTAGAAGGGCGCCCGCTTGCGA TGAGCGTTGCAAAAGGGGCGATTGGCCGTTCAATTGATTCCTTCCATGAACAAATGCTCGCCCATAGCTATGGCGGCATT GACATTATTCAAGATGATGAGCGGCTATTCGAACACAATTGGACGCCTTATGAACAACGGGTGCCCGCTGGGTTAGCCGC AATCGCCGAAGCAGCAGAACGGACAGGGCGAACGCCGCTGTATGTCGTCAATCTTACTGGCAAAACATTTGAGTTAAAAG AGCGGGCAAGAGAGGCAATTGGCTTAGGAGCGCCGGCACTGATGCTAAATGTATATGCGTATGGGATTGATGTGCTCCAA GGCCTTCGTGAAGATCCAGAAATTGACGTACCGATTTTTGCCCATTCCTCACTGACGGGAATGATGACACGCTCCAAACA ACATGGCATAGCCTCTCGTCTTTTGTTAGGAAAGCTGCTGCGCATGGCAGGGGCAGACGCCGTTCTATTTCCTTCTCCTT ATGGCAGGATCGGCATAAATCCAGAAGAAGCGCAACGGGTAAAAGACCAGCTGACAATGACGACTCAAATGAAGCGTGCC TTTCCAATTCCTTCTGCTGGCATTGATTTTCAAACGATTGCCACTGTCCGCCAAGATTTTGGCGAAGATGTCATTATCAA TCTCGGCGGTAGCGTCCACCGTTATAAAGGCGGCGTAGAAGCAGGAGGCAAAGCATTTATCGAAGCACTTAACAGCGCGA ACTAA
Upstream 100 bases:
>100_bases CAATCTGGACGCTGCTTGGCCTGAGCAGCGTTCTTGACATGGTAGCGCTTTATTTGTAATGTTGATATAAAAATCATCTT GTCGATGAGGAGGTTTGGCT
Downstream 100 bases:
>100_bases AAAACAAACGAGTTGGGCATAGCCCAACTCGTTTTATGGTGTGTCTTACAAAATTTAAATGTCTGCATGTCCCAATGCAT CTTGGAAAATAAAGACGAGT
Product: 2,3-diketo-5-methylthiopentyl-1-phosphate enolase
Products: 3-phospho-D-glycerate; H+
Alternate protein names: DK-MTP-1-P enolase; RuBisCO-like protein; RLP
Number of amino acids: Translated: 374; Mature: 373
Protein sequence:
>374_residues MAQINAVYYVSDSNEFIEEKAEKMATGLTAKPWQEMPEAEKQESFAYKGKVVSINEDPSYGEGSIVTISFPVAYEVPDFP SILTTTYGRLSYEPNVKLLDLQFSNDLVERFPGPLYGIEGIRDLVEVEGRPLAMSVAKGAIGRSIDSFHEQMLAHSYGGI DIIQDDERLFEHNWTPYEQRVPAGLAAIAEAAERTGRTPLYVVNLTGKTFELKERAREAIGLGAPALMLNVYAYGIDVLQ GLREDPEIDVPIFAHSSLTGMMTRSKQHGIASRLLLGKLLRMAGADAVLFPSPYGRIGINPEEAQRVKDQLTMTTQMKRA FPIPSAGIDFQTIATVRQDFGEDVIINLGGSVHRYKGGVEAGGKAFIEALNSAN
Sequences:
>Translated_374_residues MAQINAVYYVSDSNEFIEEKAEKMATGLTAKPWQEMPEAEKQESFAYKGKVVSINEDPSYGEGSIVTISFPVAYEVPDFP SILTTTYGRLSYEPNVKLLDLQFSNDLVERFPGPLYGIEGIRDLVEVEGRPLAMSVAKGAIGRSIDSFHEQMLAHSYGGI DIIQDDERLFEHNWTPYEQRVPAGLAAIAEAAERTGRTPLYVVNLTGKTFELKERAREAIGLGAPALMLNVYAYGIDVLQ GLREDPEIDVPIFAHSSLTGMMTRSKQHGIASRLLLGKLLRMAGADAVLFPSPYGRIGINPEEAQRVKDQLTMTTQMKRA FPIPSAGIDFQTIATVRQDFGEDVIINLGGSVHRYKGGVEAGGKAFIEALNSAN >Mature_373_residues AQINAVYYVSDSNEFIEEKAEKMATGLTAKPWQEMPEAEKQESFAYKGKVVSINEDPSYGEGSIVTISFPVAYEVPDFPS ILTTTYGRLSYEPNVKLLDLQFSNDLVERFPGPLYGIEGIRDLVEVEGRPLAMSVAKGAIGRSIDSFHEQMLAHSYGGID IIQDDERLFEHNWTPYEQRVPAGLAAIAEAAERTGRTPLYVVNLTGKTFELKERAREAIGLGAPALMLNVYAYGIDVLQG LREDPEIDVPIFAHSSLTGMMTRSKQHGIASRLLLGKLLRMAGADAVLFPSPYGRIGINPEEAQRVKDQLTMTTQMKRAF PIPSAGIDFQTIATVRQDFGEDVIINLGGSVHRYKGGVEAGGKAFIEALNSAN
Specific function: Catalyzes the enolization of 2,3-diketo-5- methylthiopentyl-1-phosphate (DK-MTP-1-P) into 2-hydroxy-3-keto-5- methylthiopentenyl-1-phosphate (HK-MTPenyl-1-P)
COG id: COG1850
COG function: function code G; Ribulose 1,5-bisphosphate carboxylase, large subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the RuBisCO large chain family. Type IV subfamily
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MTNW_BACSK (Q5WH45)
Other databases:
- EMBL: AP006627 - RefSeq: YP_175271.1 - ProteinModelPortal: Q5WH45 - SMR: Q5WH45 - STRING: Q5WH45 - EnsemblBacteria: EBBACT00000048647 - GeneID: 3204489 - GenomeReviews: AP006627_GR - KEGG: bcl:ABC1775 - NMPDR: fig|66692.3.peg.1723 - eggNOG: COG1850 - GeneTree: EBGT00050000002355 - HOGENOM: HBG405441 - OMA: FELKERA - ProtClustDB: PRK09549 - BioCyc: BCLA66692:ABC1775-MONOMER - GO: GO:0009536 - HAMAP: MF_01679 - InterPro: IPR000685 - InterPro: IPR017443 - Gene3D: G3DSA:3.20.20.110 - Gene3D: G3DSA:3.30.70.150
Pfam domain/function: PF00016 RuBisCO_large; SSF51649 RuBisCO_large; SSF54966 RuBisCO_large
EC number: 4.1.1.39
Molecular weight: Translated: 41069; Mature: 40938
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: PS00157 RUBISCO_LARGE; PS00687 ALDEHYDE_DEHYDR_GLU
Important sites: BINDING 138-138 BINDING 255-255 BINDING 327-327
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQINAVYYVSDSNEFIEEKAEKMATGLTAKPWQEMPEAEKQESFAYKGKVVSINEDPSY CCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHCCEEEEECCCCCC GEGSIVTISFPVAYEVPDFPSILTTTYGRLSYEPNVKLLDLQFSNDLVERFPGPLYGIEG CCCCEEEEEECEEECCCCCCHHHHHHCCCEEECCCCEEEEEECCHHHHHHCCCCCCCHHH IRDLVEVEGRPLAMSVAKGAIGRSIDSFHEQMLAHSYGGIDIIQDDERLFEHNWTPYEQR HHHHHHCCCCCEEHHHHHHHHHCHHHHHHHHHHHHCCCCEEEEECCHHHHHCCCCCHHHH VPAGLAAIAEAAERTGRTPLYVVNLTGKTFELKERAREAIGLGAPALMLNVYAYGIDVLQ CCHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH GLREDPEIDVPIFAHSSLTGMMTRSKQHGIASRLLLGKLLRMAGADAVLFPSPYGRIGIN CCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCC PEEAQRVKDQLTMTTQMKRAFPIPSAGIDFQTIATVRQDFGEDVIINLGGSVHRYKGGVE HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCEECCCCCC AGGKAFIEALNSAN CCHHHHHHHHHCCC >Mature Secondary Structure AQINAVYYVSDSNEFIEEKAEKMATGLTAKPWQEMPEAEKQESFAYKGKVVSINEDPSY CCEEEEEEECCCHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHCCEEEEECCCCCC GEGSIVTISFPVAYEVPDFPSILTTTYGRLSYEPNVKLLDLQFSNDLVERFPGPLYGIEG CCCCEEEEEECEEECCCCCCHHHHHHCCCEEECCCCEEEEEECCHHHHHHCCCCCCCHHH IRDLVEVEGRPLAMSVAKGAIGRSIDSFHEQMLAHSYGGIDIIQDDERLFEHNWTPYEQR HHHHHHCCCCCEEHHHHHHHHHCHHHHHHHHHHHHCCCCEEEEECCHHHHHCCCCCHHHH VPAGLAAIAEAAERTGRTPLYVVNLTGKTFELKERAREAIGLGAPALMLNVYAYGIDVLQ CCHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH GLREDPEIDVPIFAHSSLTGMMTRSKQHGIASRLLLGKLLRMAGADAVLFPSPYGRIGIN CCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCC PEEAQRVKDQLTMTTQMKRAFPIPSAGIDFQTIATVRQDFGEDVIINLGGSVHRYKGGVE HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCEECCCCCC AGGKAFIEALNSAN CCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: D-ribulose 1,5-bisphosphate; CO2; H2O
Specific reaction: D-ribulose 1,5-bisphosphate + CO2 + H2O = 2 3-phospho-D-glycerate + 2 H+
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA