Click here to switch to the map view.

The map label for this gene is 56963360

Identifier: 56963360

GI number: 56963360

Start: 1720520

End: 1720807

Strand: Direct

Name: 56963360

Synonym: ABC1595

Alternate gene names: NA

Gene position: 1720520-1720807 (Clockwise)

Preceding gene: 56963359

Following gene: 56963361

Centisome position: 39.98

GC content: 40.97

Gene sequence:

>288_bases
ATGGCTCAAGAAGAAAAAGAGCGTTTTGTCATTCCAGATGAGAATGGCACAGAACATCTATTTGATGAATTGTTCCGTTT
TACAGTTGACGAAACAGAAAAGTCGTATATGGTACTCGTTCCAGTCGGGGAAGAAGAGGATGACGAAGAGGAAGTCGAAG
TGTTTGCGTTCCGTTATGAAGAACAGCAAAACGAAGACAATGATATTTCGTTTTATCCCGTTGAGACGGACGAAGAATGG
GACATGATCGAAGAGATGCTTAATACTTTCTCTGAAGAGGAAGAGTAA

Upstream 100 bases:

>100_bases
TAGACAAAATGGCTGCTGTATTCATTTTACAAGGATATTTAGACCGCCAAAGCCACACACTGACATAGAACAAACCATTT
AGCAAAGCGAGGGAAAGAAA

Downstream 100 bases:

>100_bases
AACCACAAACCCGTGCTGAATGTGGCACGGGTTTGCTTTAGAATAAAGGGCGAATGCTGTAAAAATGAAGGCGATAAAGG
ATGACTTTAGCATTTTTTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 95; Mature: 94

Protein sequence:

>95_residues
MAQEEKERFVIPDENGTEHLFDELFRFTVDETEKSYMVLVPVGEEEDDEEEVEVFAFRYEEQQNEDNDISFYPVETDEEW
DMIEEMLNTFSEEEE

Sequences:

>Translated_95_residues
MAQEEKERFVIPDENGTEHLFDELFRFTVDETEKSYMVLVPVGEEEDDEEEVEVFAFRYEEQQNEDNDISFYPVETDEEW
DMIEEMLNTFSEEEE
>Mature_94_residues
AQEEKERFVIPDENGTEHLFDELFRFTVDETEKSYMVLVPVGEEEDDEEEVEVFAFRYEEQQNEDNDISFYPVETDEEWD
MIEEMLNTFSEEEE

Specific function: Unknown

COG id: COG3906

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0473 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1595_BACSK (Q5WHM5)

Other databases:

- EMBL:   AP006627
- RefSeq:   YP_175091.1
- STRING:   Q5WHM5
- EnsemblBacteria:   EBBACT00000046740
- GeneID:   3201246
- GenomeReviews:   AP006627_GR
- KEGG:   bcl:ABC1595
- NMPDR:   fig|66692.3.peg.1557
- eggNOG:   COG3906
- GeneTree:   EBGT00050000002371
- HOGENOM:   HBG726191
- OMA:   GNEQLCE
- ProtClustDB:   PRK13678
- BioCyc:   BCLA66692:ABC1595-MONOMER
- HAMAP:   MF_01448
- InterPro:   IPR009711

Pfam domain/function: PF06949 DUF1292

EC number: NA

Molecular weight: Translated: 11520; Mature: 11389

Theoretical pI: Translated: 3.40; Mature: 3.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQEEKERFVIPDENGTEHLFDELFRFTVDETEKSYMVLVPVGEEEDDEEEVEVFAFRYE
CCCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHEECH
EQQNEDNDISFYPVETDEEWDMIEEMLNTFSEEEE
HHCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
AQEEKERFVIPDENGTEHLFDELFRFTVDETEKSYMVLVPVGEEEDDEEEVEVFAFRYE
CCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHEECH
EQQNEDNDISFYPVETDEEWDMIEEMLNTFSEEEE
HHCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA