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The map label for this gene is ycjS [H]

Identifier: 56963339

GI number: 56963339

Start: 1695695

End: 1696708

Strand: Direct

Name: ycjS [H]

Synonym: ABC1574

Alternate gene names: 56963339

Gene position: 1695695-1696708 (Clockwise)

Preceding gene: 56963338

Following gene: 56963340

Centisome position: 39.4

GC content: 47.73

Gene sequence:

>1014_bases
ATGATACAATTAAAACTAGGGTTTATTGGCGTCGGTGGCATTGCATCAGGCAGGCATATCCCTGCATTTTCAAAAATCGA
GGGAGTCGAACTTGCTGGCGTTTATGATGTTAATGAGAACAGAGCGAAAGAAGTTGCCGACCAGTTTGCGATTCCTTTTG
TCGCAAAAGAGGCAGCGGAACTGTTCAAACGTGTCGATGCCGTTATTATTTGTACGCCTAACAAGTTTCACCATGAGATG
TCCGTTGCCGCACTTGAAGCTGGTGTCCACGTATTTTGTGAAAAACCGATGGCCATTACGGATGCAGCGTGTGAGGACAT
GGTCAACGCAGCCGAGAAAGCGAAGCGTGTATTGCAAGTCGGTTACCATTACCGTTTTAAAAAGGAATCGCAAGCCGCCA
AACGCCTAATTGCCTCTGGAGGAATCGGCGACCCTCTAGTTGTGCGTGTCGAAGCGATGCGGCGGAGAAAAGTCCCTGGA
TGGGGCGTGTTCACCAATAAATCCCTTCAAGGCGGAGGGTGTCTAATGGATTACGGTTGCCATTTGTTAGATTTAGCACT
TTGGCTCCTTGATTTCCCAGAAATAGAAAGTGTTCACGGCCAAACGTACGAAATGGTCAGCCGCGATCCTGACCAAGTCA
ATCAATGGGGATTGTACGATGCAACGACCATTGATGTCGAAGACCACGCCACTGCTTATATTAAATTTAAAAACGGCGCG
ACGATGCTATTTGAAACGTCATGGGCTGCCAATGTTCCTGAAGACAAAGAAACGTTAAGCATCTCTGGCACTCAAGGTGG
CGTAAACGTGTTTCCTTATGCTGTCAACCATGCTTCTCAAGGAATGATGACGACTACCGTGGCGGACTGGATTTCCGGAG
AAAGCGATGAAGGGCTAGCACAAGCACGGCATTTTGTCGCTGCCTGCACGAGTGGAACAGAACTGATCGTGAAACCGAAT
GAGGCCCGCCTCGTTTCAAGCATCATCGAACAAATTTATAAACAGAGTAAGTAA

Upstream 100 bases:

>100_bases
GGGTCATTCAAAATGCCGTTCGCTGGGCAGCACCGACGAAACGGGCATATCCTGCTTACGGAAACGCCAAGCCTCTTGAG
CCTGTTCCAGGGGGAAGCAA

Downstream 100 bases:

>100_bases
GCTTCGCTCAATCGCGAGGGCCCATTCCGGTTGATCCGAAACCGGCCCCAACTTTCTGAAGTCTCCTCCTTTCATCCTTG
GATGAAGGGAAGGAGACTTC

Product: NADH-dependent dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MIQLKLGFIGVGGIASGRHIPAFSKIEGVELAGVYDVNENRAKEVADQFAIPFVAKEAAELFKRVDAVIICTPNKFHHEM
SVAALEAGVHVFCEKPMAITDAACEDMVNAAEKAKRVLQVGYHYRFKKESQAAKRLIASGGIGDPLVVRVEAMRRRKVPG
WGVFTNKSLQGGGCLMDYGCHLLDLALWLLDFPEIESVHGQTYEMVSRDPDQVNQWGLYDATTIDVEDHATAYIKFKNGA
TMLFETSWAANVPEDKETLSISGTQGGVNVFPYAVNHASQGMMTTTVADWISGESDEGLAQARHFVAACTSGTELIVKPN
EARLVSSIIEQIYKQSK

Sequences:

>Translated_337_residues
MIQLKLGFIGVGGIASGRHIPAFSKIEGVELAGVYDVNENRAKEVADQFAIPFVAKEAAELFKRVDAVIICTPNKFHHEM
SVAALEAGVHVFCEKPMAITDAACEDMVNAAEKAKRVLQVGYHYRFKKESQAAKRLIASGGIGDPLVVRVEAMRRRKVPG
WGVFTNKSLQGGGCLMDYGCHLLDLALWLLDFPEIESVHGQTYEMVSRDPDQVNQWGLYDATTIDVEDHATAYIKFKNGA
TMLFETSWAANVPEDKETLSISGTQGGVNVFPYAVNHASQGMMTTTVADWISGESDEGLAQARHFVAACTSGTELIVKPN
EARLVSSIIEQIYKQSK
>Mature_337_residues
MIQLKLGFIGVGGIASGRHIPAFSKIEGVELAGVYDVNENRAKEVADQFAIPFVAKEAAELFKRVDAVIICTPNKFHHEM
SVAALEAGVHVFCEKPMAITDAACEDMVNAAEKAKRVLQVGYHYRFKKESQAAKRLIASGGIGDPLVVRVEAMRRRKVPG
WGVFTNKSLQGGGCLMDYGCHLLDLALWLLDFPEIESVHGQTYEMVSRDPDQVNQWGLYDATTIDVEDHATAYIKFKNGA
TMLFETSWAANVPEDKETLSISGTQGGVNVFPYAVNHASQGMMTTTVADWISGESDEGLAQARHFVAACTSGTELIVKPN
EARLVSSIIEQIYKQSK

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI1787574, Length=337, Percent_Identity=31.7507418397626, Blast_Score=197, Evalue=9e-52,
Organism=Escherichia coli, GI87081947, Length=196, Percent_Identity=32.1428571428571, Blast_Score=80, Evalue=3e-16,
Organism=Escherichia coli, GI87082405, Length=277, Percent_Identity=28.5198555956679, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1787307, Length=190, Percent_Identity=28.4210526315789, Blast_Score=73, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24581117, Length=236, Percent_Identity=28.3898305084746, Blast_Score=78, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 36857; Mature: 36857

Theoretical pI: Translated: 5.81; Mature: 5.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQLKLGFIGVGGIASGRHIPAFSKIEGVELAGVYDVNENRAKEVADQFAIPFVAKEAAE
CEEEEEEEEEECCCCCCCCCCCHHCCCCEEEEEEEECCCHHHHHHHHHHCCCHHHHHHHH
LFKRVDAVIICTPNKFHHEMSVAALEAGVHVFCEKPMAITDAACEDMVNAAEKAKRVLQV
HHHHCCEEEEECCCHHHHHHHHHHHHHCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
GYHYRFKKESQAAKRLIASGGIGDPLVVRVEAMRRRKVPGWGVFTNKSLQGGGCLMDYGC
HHHEEECCHHHHHHHHHHCCCCCCHHEEEEHHHHHCCCCCCCEEECCCCCCCCCHHHHHH
HLLDLALWLLDFPEIESVHGQTYEMVSRDPDQVNQWGLYDATTIDVEDHATAYIKFKNGA
HHHHHHHHHHCCCCHHHHCCCHHHHHCCCHHHHHHCCCCCEEEEEECCCCEEEEEECCCC
TMLFETSWAANVPEDKETLSISGTQGGVNVFPYAVNHASQGMMTTTVADWISGESDEGLA
EEEEEECCCCCCCCCCCEEEEECCCCCCEEEEEEECCCCCCCCHHHHHHHHCCCCCCHHH
QARHFVAACTSGTELIVKPNEARLVSSIIEQIYKQSK
HHHHHHHEECCCCEEEECCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIQLKLGFIGVGGIASGRHIPAFSKIEGVELAGVYDVNENRAKEVADQFAIPFVAKEAAE
CEEEEEEEEEECCCCCCCCCCCHHCCCCEEEEEEEECCCHHHHHHHHHHCCCHHHHHHHH
LFKRVDAVIICTPNKFHHEMSVAALEAGVHVFCEKPMAITDAACEDMVNAAEKAKRVLQV
HHHHCCEEEEECCCHHHHHHHHHHHHHCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
GYHYRFKKESQAAKRLIASGGIGDPLVVRVEAMRRRKVPGWGVFTNKSLQGGGCLMDYGC
HHHEEECCHHHHHHHHHHCCCCCCHHEEEEHHHHHCCCCCCCEEECCCCCCCCCHHHHHH
HLLDLALWLLDFPEIESVHGQTYEMVSRDPDQVNQWGLYDATTIDVEDHATAYIKFKNGA
HHHHHHHHHHCCCCHHHHCCCHHHHHCCCHHHHHHCCCCCEEEEEECCCCEEEEEECCCC
TMLFETSWAANVPEDKETLSISGTQGGVNVFPYAVNHASQGMMTTTVADWISGESDEGLA
EEEEEECCCCCCCCCCCEEEEECCCCCCEEEEEEECCCCCCCCHHHHHHHHCCCCCCHHH
QARHFVAACTSGTELIVKPNEARLVSSIIEQIYKQSK
HHHHHHHEECCCCEEEECCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]