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The map label for this gene is ecsB [H]

Identifier: 56963299

GI number: 56963299

Start: 1655275

End: 1656501

Strand: Direct

Name: ecsB [H]

Synonym: ABC1534

Alternate gene names: 56963299

Gene position: 1655275-1656501 (Clockwise)

Preceding gene: 56963298

Following gene: 56963300

Centisome position: 38.46

GC content: 45.23

Gene sequence:

>1227_bases
ATGATTGACGGCAAATCATTGTGGGCAGACCGCTGCCACAACTACTGGAGGGAAGCGCAAGGCTATTTAAAGCTAATTTT
AAACAGCGGCTTTGTCGGTTCGGTTTTCTTTTTGTTTTTGTTTTTAACGGTCTACTACCAGCAATTTATTGAAACAATGC
CGGCCGATTTTCCTGTAGCAGAGCTGCTTACCGTACTATTTGCCTGGAGGCTGACAGCTGGCCATATCCGCACGTTTGTC
AAGCCCGCCGATATTGTCTTTTTGTTGCCGTATGAAGAGCGGCTTCGTCCTTATTTTGCCCGTTCCATTGCTTATTCGAT
TGCTTGGCAATCAAGCTATATTGTGTTGTTGTTTATGGCAAGCGGGCCAATGTTTACAGCAAGAGGCGGAAGCGGAACTG
TTTTTTGGGTAACGCTTGTCTTGCTGCTAGCAGTCAAAGCATGGAATATGTTAGCGGTGTGGTATGAACAACGTCTAACA
TCCAGAGGAGAACGAGCTTCGCATATCGTTTTAAGGCTATTGTTGAACACGGCTGTTGCGTACTTGCTGTTTGATCAAGC
GCCTTACTGGCTCACGCTTGCATTGCTTTTGTTGATGGCGTTATTGTACGTCTTTTATTTCCGGATGCTCAAAACAAAGC
ATGTACTAAAATGGGATCGTTTAATTGAAATCGAAAGCGGAATGGTTTTGTTTTTTTACCGGATTGCCAATGCCTTTACA
GATGTGCCTCAACTTCGGAAAAAAGTACGGGCAAGGACCTATATGCAATGGGCAATTCCTCTGCTTGGCGGCGACAAGCG
TGCTGTTTACCAGTACTTATATGCCCGGTCGTTTATTCGTGCCAATGATTATCTTGGAACGTATGTCCGTTTATTGCTAG
TAGGTTCCCTTATCCTTTACATTCTTCCTTCGGGCTGGATGCAAGTTGGGGTTGCTTTCTTGTTTACCCATATGACGATG
ATGCAGCTTTCGACGTTGTCTTTTCATCATGCTACAAGTACGTGGGTCGATTTGTACCCGATTCGGCCAGGGGAGCAAAA
AACGGCTATGTCGCAGTTAGTATTGCGATTGTTGGCCGTGCTTGTGCTTGTATTTGCCCTCATTGTCTTGGTCTCTACTT
CAGTCATTTTCGGCTTGCTTACACTTGTTGCTACTGGTGTATTGGCATTTTACGGCAGCCAGACGCTCATTCATCGCAAA
AGAGGAAAATACCGGCGTATTCGGTAA

Upstream 100 bases:

>100_bases
GTTGTTTTGGCTGGTACGCTTGCCGACATGCGCGAGGCAATCGGCAAACCAGACGCAACGCTTGATGACATTTATATTGA
AATGACGAAGGAAGAGCGCC

Downstream 100 bases:

>100_bases
TATACATGAAATAAGGAGTGATTTCATGTATGAAAAAGAAGTGGAAGAGGAGCTAAGGCGCTGGCAGCGTAAAATGAAAA
AACGGCCATCACGTCTTTCA

Product: multidrug ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 408; Mature: 408

Protein sequence:

>408_residues
MIDGKSLWADRCHNYWREAQGYLKLILNSGFVGSVFFLFLFLTVYYQQFIETMPADFPVAELLTVLFAWRLTAGHIRTFV
KPADIVFLLPYEERLRPYFARSIAYSIAWQSSYIVLLFMASGPMFTARGGSGTVFWVTLVLLLAVKAWNMLAVWYEQRLT
SRGERASHIVLRLLLNTAVAYLLFDQAPYWLTLALLLLMALLYVFYFRMLKTKHVLKWDRLIEIESGMVLFFYRIANAFT
DVPQLRKKVRARTYMQWAIPLLGGDKRAVYQYLYARSFIRANDYLGTYVRLLLVGSLILYILPSGWMQVGVAFLFTHMTM
MQLSTLSFHHATSTWVDLYPIRPGEQKTAMSQLVLRLLAVLVLVFALIVLVSTSVIFGLLTLVATGVLAFYGSQTLIHRK
RGKYRRIR

Sequences:

>Translated_408_residues
MIDGKSLWADRCHNYWREAQGYLKLILNSGFVGSVFFLFLFLTVYYQQFIETMPADFPVAELLTVLFAWRLTAGHIRTFV
KPADIVFLLPYEERLRPYFARSIAYSIAWQSSYIVLLFMASGPMFTARGGSGTVFWVTLVLLLAVKAWNMLAVWYEQRLT
SRGERASHIVLRLLLNTAVAYLLFDQAPYWLTLALLLLMALLYVFYFRMLKTKHVLKWDRLIEIESGMVLFFYRIANAFT
DVPQLRKKVRARTYMQWAIPLLGGDKRAVYQYLYARSFIRANDYLGTYVRLLLVGSLILYILPSGWMQVGVAFLFTHMTM
MQLSTLSFHHATSTWVDLYPIRPGEQKTAMSQLVLRLLAVLVLVFALIVLVSTSVIFGLLTLVATGVLAFYGSQTLIHRK
RGKYRRIR
>Mature_408_residues
MIDGKSLWADRCHNYWREAQGYLKLILNSGFVGSVFFLFLFLTVYYQQFIETMPADFPVAELLTVLFAWRLTAGHIRTFV
KPADIVFLLPYEERLRPYFARSIAYSIAWQSSYIVLLFMASGPMFTARGGSGTVFWVTLVLLLAVKAWNMLAVWYEQRLT
SRGERASHIVLRLLLNTAVAYLLFDQAPYWLTLALLLLMALLYVFYFRMLKTKHVLKWDRLIEIESGMVLFFYRIANAFT
DVPQLRKKVRARTYMQWAIPLLGGDKRAVYQYLYARSFIRANDYLGTYVRLLLVGSLILYILPSGWMQVGVAFLFTHMTM
MQLSTLSFHHATSTWVDLYPIRPGEQKTAMSQLVLRLLAVLVLVFALIVLVSTSVIFGLLTLVATGVLAFYGSQTLIHRK
RGKYRRIR

Specific function: Presumed to form part of an ABC-transporter, it may form a transport channel [H]

COG id: COG4473

COG function: function code U; Predicted ABC-type exoprotein transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010288 [H]

Pfam domain/function: PF05975 EcsB [H]

EC number: NA

Molecular weight: Translated: 47189; Mature: 47189

Theoretical pI: Translated: 10.41; Mature: 10.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDGKSLWADRCHNYWREAQGYLKLILNSGFVGSVFFLFLFLTVYYQQFIETMPADFPVA
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
ELLTVLFAWRLTAGHIRTFVKPADIVFLLPYEERLRPYFARSIAYSIAWQSSYIVLLFMA
HHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEE
SGPMFTARGGSGTVFWVTLVLLLAVKAWNMLAVWYEQRLTSRGERASHIVLRLLLNTAVA
CCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
YLLFDQAPYWLTLALLLLMALLYVFYFRMLKTKHVLKWDRLIEIESGMVLFFYRIANAFT
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHC
DVPQLRKKVRARTYMQWAIPLLGGDKRAVYQYLYARSFIRANDYLGTYVRLLLVGSLILY
CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILPSGWMQVGVAFLFTHMTMMQLSTLSFHHATSTWVDLYPIRPGEQKTAMSQLVLRLLAV
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHH
LVLVFALIVLVSTSVIFGLLTLVATGVLAFYGSQTLIHRKRGKYRRIR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCC
>Mature Secondary Structure
MIDGKSLWADRCHNYWREAQGYLKLILNSGFVGSVFFLFLFLTVYYQQFIETMPADFPVA
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
ELLTVLFAWRLTAGHIRTFVKPADIVFLLPYEERLRPYFARSIAYSIAWQSSYIVLLFMA
HHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEE
SGPMFTARGGSGTVFWVTLVLLLAVKAWNMLAVWYEQRLTSRGERASHIVLRLLLNTAVA
CCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
YLLFDQAPYWLTLALLLLMALLYVFYFRMLKTKHVLKWDRLIEIESGMVLFFYRIANAFT
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHC
DVPQLRKKVRARTYMQWAIPLLGGDKRAVYQYLYARSFIRANDYLGTYVRLLLVGSLILY
CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILPSGWMQVGVAFLFTHMTMMQLSTLSFHHATSTWVDLYPIRPGEQKTAMSQLVLRLLAV
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHH
LVLVFALIVLVSTSVIFGLLTLVATGVLAFYGSQTLIHRKRGKYRRIR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8581172; 9579061; 9384377 [H]