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The map label for this gene is spoVR [H]

Identifier: 56963265

GI number: 56963265

Start: 1623281

End: 1624672

Strand: Direct

Name: spoVR [H]

Synonym: ABC1500

Alternate gene names: 56963265

Gene position: 1623281-1624672 (Clockwise)

Preceding gene: 56963264

Following gene: 56963266

Centisome position: 37.72

GC content: 41.67

Gene sequence:

>1392_bases
TTGTCTGACAATCGGAAAGAACTGCAGTATGCGATTGAAGAAATTACTGAAATTGCTAAAGGATTTGGCCTTGATTTTTA
TGAAATGCGCTATGAAATTTGCCCAGCGGATATCATTTACACATTTGGTGCTTATGGGATGCCAACACGGTATAACCATT
GGTCGTTTGGCAAGCAATACCACAAAATGAAACTTCAGTATGATTTAGGGTTAAGCAAAATTTATGAGCTCGTGATTAAT
TCTGATCCATGCTATGCCTTTTTGTTAGACAGCAATAGTTTGATCCAAAACAAGCTTATTGTGGCCCATGTGTTGGCCCA
TTGTGACTTTTTTAAAAACAACATTCGCTTTTCCAATACACGGCGCGATATGGTAGAGAGCATGAGCGCAACCGCCGAAC
GGGTTGCCCACTATGAACATATTCATGGCAAAGAGCAAGTTGAAAATTTTCTTGATGCTGTTTTGGCGATTCAAGAGCAT
ATTGATCCTGGGCTTGTCAAGCCAGTGGAGAGCAGCGAATTGACATTTGAAAAGCCACGAGCTTCTGAATACGAGGATTT
GTGGAATTTAGAAGAGCAACCGAAAAAGGAAGCGGCTCCAAAAAAGAAACGTTTTCCTGAAAGCCCTGAAAAAGATGTGC
TTCGTTTTATCGAACACCATAGCAGGGAATTGGAACCTTGGCAACGTGATATTTTGACAATGATGCGCGAAGAGATGCTT
TATTTTTGGCCACAATTGGAAACGAAAATCATGAATGAAGGCTGGGCCTCTTTTTGGCATGCACGGATCATTAGAGAAAT
GGATTTAACGAGCGAAGAGGCCGTTGAATTTGCGAAGTTGAACGCTGCTGTTGTCCAGCCATCGAAAACGTCCATTAATC
CTTATTACTTAGGGTTGAAAATTTTTGAGGATATTGAACAACGCTACAACGAGCCAACAGAGGAAATGCAGCGCAAACAA
GGGATTAAGCCAGGGAGCGGGCGAGAGAAAATCTTTGAAGTCCGTGAAATTGAATCGGATACGTCCTTTATCCGCAACTA
TTTAACAAAAGAGCTCGTCCACCGGGAAGACATGTACTTATTCCAAAAACAAGGTTCCGACTATAAGGTTGTCGACAAAG
CTTGGGAAGGTGTACGTGACCACATTACTAAATCACGGGTCAATGGCGGCTTTCCGTACCTGGTAGTAACGGATGGCGAT
TACTTAAAAAATGGGGAGCTGTATATTACTCATCGTTTTGAAGGAATTGAACTTGATGTTGGCCATTTAGAGAGAGTCCT
TCCTTATCTTTATCAACTATGGGGGCGAACCGTACATTTGGAAACAGAAATTAATGAAAAACAGATCGTTTTTATTTACG
ACGGCGGCAAAATGCACCGCAAGTATTTATAG

Upstream 100 bases:

>100_bases
GCCCTTGCGTACAGGCTTGCTGTACGCCAAGGGTTTTTTCTTCGTTCATGTTCCCCCGCTGCTGTTCATAGAATAGGAAG
ACAACGAAGGAGGGAGCGCG

Downstream 100 bases:

>100_bases
GGGCAGCAGATAGCCCTTTTTTTGTGCAACGTGAGCGAATGTCTTTACGTTACATAGGCATACAAAAAAATTTCAAAATG
ATCGATATATTAATTGACGG

Product: stage V sporulation protein R

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 463; Mature: 462

Protein sequence:

>463_residues
MSDNRKELQYAIEEITEIAKGFGLDFYEMRYEICPADIIYTFGAYGMPTRYNHWSFGKQYHKMKLQYDLGLSKIYELVIN
SDPCYAFLLDSNSLIQNKLIVAHVLAHCDFFKNNIRFSNTRRDMVESMSATAERVAHYEHIHGKEQVENFLDAVLAIQEH
IDPGLVKPVESSELTFEKPRASEYEDLWNLEEQPKKEAAPKKKRFPESPEKDVLRFIEHHSRELEPWQRDILTMMREEML
YFWPQLETKIMNEGWASFWHARIIREMDLTSEEAVEFAKLNAAVVQPSKTSINPYYLGLKIFEDIEQRYNEPTEEMQRKQ
GIKPGSGREKIFEVREIESDTSFIRNYLTKELVHREDMYLFQKQGSDYKVVDKAWEGVRDHITKSRVNGGFPYLVVTDGD
YLKNGELYITHRFEGIELDVGHLERVLPYLYQLWGRTVHLETEINEKQIVFIYDGGKMHRKYL

Sequences:

>Translated_463_residues
MSDNRKELQYAIEEITEIAKGFGLDFYEMRYEICPADIIYTFGAYGMPTRYNHWSFGKQYHKMKLQYDLGLSKIYELVIN
SDPCYAFLLDSNSLIQNKLIVAHVLAHCDFFKNNIRFSNTRRDMVESMSATAERVAHYEHIHGKEQVENFLDAVLAIQEH
IDPGLVKPVESSELTFEKPRASEYEDLWNLEEQPKKEAAPKKKRFPESPEKDVLRFIEHHSRELEPWQRDILTMMREEML
YFWPQLETKIMNEGWASFWHARIIREMDLTSEEAVEFAKLNAAVVQPSKTSINPYYLGLKIFEDIEQRYNEPTEEMQRKQ
GIKPGSGREKIFEVREIESDTSFIRNYLTKELVHREDMYLFQKQGSDYKVVDKAWEGVRDHITKSRVNGGFPYLVVTDGD
YLKNGELYITHRFEGIELDVGHLERVLPYLYQLWGRTVHLETEINEKQIVFIYDGGKMHRKYL
>Mature_462_residues
SDNRKELQYAIEEITEIAKGFGLDFYEMRYEICPADIIYTFGAYGMPTRYNHWSFGKQYHKMKLQYDLGLSKIYELVINS
DPCYAFLLDSNSLIQNKLIVAHVLAHCDFFKNNIRFSNTRRDMVESMSATAERVAHYEHIHGKEQVENFLDAVLAIQEHI
DPGLVKPVESSELTFEKPRASEYEDLWNLEEQPKKEAAPKKKRFPESPEKDVLRFIEHHSRELEPWQRDILTMMREEMLY
FWPQLETKIMNEGWASFWHARIIREMDLTSEEAVEFAKLNAAVVQPSKTSINPYYLGLKIFEDIEQRYNEPTEEMQRKQG
IKPGSGREKIFEVREIESDTSFIRNYLTKELVHREDMYLFQKQGSDYKVVDKAWEGVRDHITKSRVNGGFPYLVVTDGDY
LKNGELYITHRFEGIELDVGHLERVLPYLYQLWGRTVHLETEINEKQIVFIYDGGKMHRKYL

Specific function: Appears to be involved in spore cortex formation [H]

COG id: COG2719

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ycgB [H]

Homologues:

Organism=Escherichia coli, GI1787437, Length=482, Percent_Identity=29.4605809128631, Blast_Score=176, Evalue=2e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007390 [H]

Pfam domain/function: PF04293 SpoVR [H]

EC number: NA

Molecular weight: Translated: 54767; Mature: 54636

Theoretical pI: Translated: 5.62; Mature: 5.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDNRKELQYAIEEITEIAKGFGLDFYEMRYEICPADIIYTFGAYGMPTRYNHWSFGKQY
CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHCCCCCCCCCCCCCHHHHHH
HKMKLQYDLGLSKIYELVINSDPCYAFLLDSNSLIQNKLIVAHVLAHCDFFKNNIRFSNT
HHEEEEHHCCHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCEECCH
RRDMVESMSATAERVAHYEHIHGKEQVENFLDAVLAIQEHIDPGLVKPVESSELTFEKPR
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
ASEYEDLWNLEEQPKKEAAPKKKRFPESPEKDVLRFIEHHSRELEPWQRDILTMMREEML
CCCHHHHHCCCCCCHHHCCCHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
YFWPQLETKIMNEGWASFWHARIIREMDLTSEEAVEFAKLNAAVVQPSKTSINPYYLGLK
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEECCCCCCCCCEEEHHH
IFEDIEQRYNEPTEEMQRKQGIKPGSGREKIFEVREIESDTSFIRNYLTKELVHREDMYL
HHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
FQKQGSDYKVVDKAWEGVRDHITKSRVNGGFPYLVVTDGDYLKNGELYITHRFEGIELDV
HHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEECCCEEEEEECCCEEECH
GHLERVLPYLYQLWGRTVHLETEINEKQIVFIYDGGKMHRKYL
HHHHHHHHHHHHHHCCEEEEEECCCCCEEEEEECCCHHHCCCC
>Mature Secondary Structure 
SDNRKELQYAIEEITEIAKGFGLDFYEMRYEICPADIIYTFGAYGMPTRYNHWSFGKQY
CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHCCCCCCCCCCCCCHHHHHH
HKMKLQYDLGLSKIYELVINSDPCYAFLLDSNSLIQNKLIVAHVLAHCDFFKNNIRFSNT
HHEEEEHHCCHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCEECCH
RRDMVESMSATAERVAHYEHIHGKEQVENFLDAVLAIQEHIDPGLVKPVESSELTFEKPR
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
ASEYEDLWNLEEQPKKEAAPKKKRFPESPEKDVLRFIEHHSRELEPWQRDILTMMREEML
CCCHHHHHCCCCCCHHHCCCHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
YFWPQLETKIMNEGWASFWHARIIREMDLTSEEAVEFAKLNAAVVQPSKTSINPYYLGLK
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEECCCCCCCCCEEEHHH
IFEDIEQRYNEPTEEMQRKQGIKPGSGREKIFEVREIESDTSFIRNYLTKELVHREDMYL
HHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
FQKQGSDYKVVDKAWEGVRDHITKSRVNGGFPYLVVTDGDYLKNGELYITHRFEGIELDV
HHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEECCCEEEEEECCCEEECH
GHLERVLPYLYQLWGRTVHLETEINEKQIVFIYDGGKMHRKYL
HHHHHHHHHHHHHHCCEEEEEECCCCCEEEEEECCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8144469; 9579061; 9384377 [H]