| Definition | Bacillus clausii KSM-K16, complete genome. |
|---|---|
| Accession | NC_006582 |
| Length | 4,303,871 |
Click here to switch to the map view.
The map label for this gene is yxjM [H]
Identifier: 56963197
GI number: 56963197
Start: 1544904
End: 1546034
Strand: Direct
Name: yxjM [H]
Synonym: ABC1432
Alternate gene names: 56963197
Gene position: 1544904-1546034 (Clockwise)
Preceding gene: 56963196
Following gene: 56963198
Centisome position: 35.9
GC content: 41.64
Gene sequence:
>1131_bases ATGAATAAAACGTATTTTATTTGGATTGGGATCCATTTTCTTGTATGGCTGGTTGCGATAGCAAGCATGACCACGCATTT AAACGAAATTCAACTTGCGAGTCTTTGTTTATTTTTTCTCTTGCTGTTTTTGCTCCCGCTGTTTGCAGGAAAATCAATGA TGCAAATGACGTTGTTCCTTATCCAACTACTGGCGATTACGGTTATCTTTTATCCGGACGAAAATGGGTTTTATCCCTTT TTATTATTCGTTCAGGCGTTAGTCCTCGCAGAGGCTGTTTTTTACTTGCCACGGTTAAAAAGTTTAATTGTCATTGGTGT TCAAATAAGCTTCATGCTATTGATCGTAGCTGAAGTTCGTCTTTCGATTTCAGAACTGGCTTGGATAGGCTTATTTTATC TTCTGCTGCTCCTGTCTTTGTTGTATTATCAATCGATCCATATTCGGCAAACAGTATTAATACAAAAGCATGGCGCTTTA CTTGAAGAATACAGGAAAATGAAAAGACAACTTGTGACAGAGGAGGAGCAGGCGAGGCAGGGGGAGCGGATGTTGATTGG CCACGAAATCCATGATTCTGTCGGGCATAAACTGACAGCGCTGCTTATGCAATTTGAAGCATTCCGACTAACTGCTGCTG AAAAGGATAAACAAAAAATTGCGGAGCTTAAAAAACTAGCTGAACAAAGCTTAGAGGAAACGAGAAAGGCAGTGAAATCC TTTAAGCAAAAGGATGTAGGTGGGTTACAGGGTGTGATCCGTTTGATTCGTCAGCTGGAAATGGAAAGCTTTATGAAAAT TCATTTCTCTGTGAAGCATGGTGCGTTTGCTGCATCGTTGTCAGGGGAACAATCCTTTGCGGTCTACCGTGCAGTACAAG AAGCGCTTACCAATATTATGAAACATAGCTCTACAAGGGAAGTGCAAGTGATGTTTGAATCACCTGGTGGCAGTATATTT CGCTTTGAAGTGGCGAATGAGGCGACTCCAAATCCCTATTTTCAAGAAGGCTATGGGCTAAAGGCGATGAGAGACCGATT AGAAAAAGTGGATGGTTCCATGGACGTTATTCATGATGGCTCACAATTTGTTGTCAGGGGGAGTATACGATTAGCTGATC GGAGAGGATAG
Upstream 100 bases:
>100_bases TCTAAGGCAAAGTGGTTTCGTTTATATATAAGTAAGTTCGCACATTCTTCAGGTTGGTTGCCTAATTGGATTGCGGGCAC GCCTGGAAGGAGTTTGTAGG
Downstream 100 bases:
>100_bases AATGATTAAGGTGCTGCTCGCAGAAGACCAAGTCATGGTACGGCAAGGGTTAAAAGCAATGATCGAAACCGATGAAGACA TCAAAGTAACTGGAGAGGCT
Product: two-component sensor histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 376; Mature: 376
Protein sequence:
>376_residues MNKTYFIWIGIHFLVWLVAIASMTTHLNEIQLASLCLFFLLLFLLPLFAGKSMMQMTLFLIQLLAITVIFYPDENGFYPF LLFVQALVLAEAVFYLPRLKSLIVIGVQISFMLLIVAEVRLSISELAWIGLFYLLLLLSLLYYQSIHIRQTVLIQKHGAL LEEYRKMKRQLVTEEEQARQGERMLIGHEIHDSVGHKLTALLMQFEAFRLTAAEKDKQKIAELKKLAEQSLEETRKAVKS FKQKDVGGLQGVIRLIRQLEMESFMKIHFSVKHGAFAASLSGEQSFAVYRAVQEALTNIMKHSSTREVQVMFESPGGSIF RFEVANEATPNPYFQEGYGLKAMRDRLEKVDGSMDVIHDGSQFVVRGSIRLADRRG
Sequences:
>Translated_376_residues MNKTYFIWIGIHFLVWLVAIASMTTHLNEIQLASLCLFFLLLFLLPLFAGKSMMQMTLFLIQLLAITVIFYPDENGFYPF LLFVQALVLAEAVFYLPRLKSLIVIGVQISFMLLIVAEVRLSISELAWIGLFYLLLLLSLLYYQSIHIRQTVLIQKHGAL LEEYRKMKRQLVTEEEQARQGERMLIGHEIHDSVGHKLTALLMQFEAFRLTAAEKDKQKIAELKKLAEQSLEETRKAVKS FKQKDVGGLQGVIRLIRQLEMESFMKIHFSVKHGAFAASLSGEQSFAVYRAVQEALTNIMKHSSTREVQVMFESPGGSIF RFEVANEATPNPYFQEGYGLKAMRDRLEKVDGSMDVIHDGSQFVVRGSIRLADRRG >Mature_376_residues MNKTYFIWIGIHFLVWLVAIASMTTHLNEIQLASLCLFFLLLFLLPLFAGKSMMQMTLFLIQLLAITVIFYPDENGFYPF LLFVQALVLAEAVFYLPRLKSLIVIGVQISFMLLIVAEVRLSISELAWIGLFYLLLLLSLLYYQSIHIRQTVLIQKHGAL LEEYRKMKRQLVTEEEQARQGERMLIGHEIHDSVGHKLTALLMQFEAFRLTAAEKDKQKIAELKKLAEQSLEETRKAVKS FKQKDVGGLQGVIRLIRQLEMESFMKIHFSVKHGAFAASLSGEQSFAVYRAVQEALTNIMKHSSTREVQVMFESPGGSIF RFEVANEATPNPYFQEGYGLKAMRDRLEKVDGSMDVIHDGSQFVVRGSIRLADRRG
Specific function: Probable member of the two-component regulatory system yxjM/yxjL. May activate yxjL by phosphorylation [H]
COG id: COG4585
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR011712 [H]
Pfam domain/function: PF02518 HATPase_c; PF07730 HisKA_3 [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 43005; Mature: 43005
Theoretical pI: Translated: 9.33; Mature: 9.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKTYFIWIGIHFLVWLVAIASMTTHLNEIQLASLCLFFLLLFLLPLFAGKSMMQMTLFL CCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH IQLLAITVIFYPDENGFYPFLLFVQALVLAEAVFYLPRLKSLIVIGVQISFMLLIVAEVR HHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSISELAWIGLFYLLLLLSLLYYQSIHIRQTVLIQKHGALLEEYRKMKRQLVTEEEQARQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC GERMLIGHEIHDSVGHKLTALLMQFEAFRLTAAEKDKQKIAELKKLAEQSLEETRKAVKS CCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FKQKDVGGLQGVIRLIRQLEMESFMKIHFSVKHGAFAASLSGEQSFAVYRAVQEALTNIM HHHHCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEECCCCHHHHHHHHHHHHHHHHH KHSSTREVQVMFESPGGSIFRFEVANEATPNPYFQEGYGLKAMRDRLEKVDGSMDVIHDG HCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCHHCCCCHHHHHHHHHHHCCCCEEEECC SQFVVRGSIRLADRRG CEEEEEECEEECCCCC >Mature Secondary Structure MNKTYFIWIGIHFLVWLVAIASMTTHLNEIQLASLCLFFLLLFLLPLFAGKSMMQMTLFL CCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH IQLLAITVIFYPDENGFYPFLLFVQALVLAEAVFYLPRLKSLIVIGVQISFMLLIVAEVR HHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSISELAWIGLFYLLLLLSLLYYQSIHIRQTVLIQKHGALLEEYRKMKRQLVTEEEQARQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC GERMLIGHEIHDSVGHKLTALLMQFEAFRLTAAEKDKQKIAELKKLAEQSLEETRKAVKS CCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FKQKDVGGLQGVIRLIRQLEMESFMKIHFSVKHGAFAASLSGEQSFAVYRAVQEALTNIM HHHHCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEECCCCHHHHHHHHHHHHHHHHH KHSSTREVQVMFESPGGSIFRFEVANEATPNPYFQEGYGLKAMRDRLEKVDGSMDVIHDG HCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCHHCCCCHHHHHHHHHHHCCCCEEEECC SQFVVRGSIRLADRRG CEEEEEECEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8978088; 8969509; 9384377 [H]