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The map label for this gene is ytfH [C]

Identifier: 56963192

GI number: 56963192

Start: 1540671

End: 1541012

Strand: Direct

Name: ytfH [C]

Synonym: ABC1427

Alternate gene names: 56963192

Gene position: 1540671-1541012 (Clockwise)

Preceding gene: 56963190

Following gene: 56963195

Centisome position: 35.8

GC content: 38.01

Gene sequence:

>342_bases
ATGAGTATGGCTGAATACAAAGGCAAAGTGAAACATATTCAAGATACGCCTTTTGGTTACACTTTGTCTGTTATTGGCGG
CAAATGGAAAATGGTTATTATTTACCTTTTGGCCGAAAACGAAACGGTACGCTTCAATGAGTTGAAAAGGCAAATAGGAA
CGATTACTTATAAAACATTAAGCTCACAACTGAAAGAATTGGAAGCTGATGGCATGGTGAAACGGAAAGAGTATCCGCAA
ATCCCTCCTAAAGTCGAGTACAGCCTCACTGAAAAAGCAGAGACATTATTACCTGTTTTGGAAGAATTATGTGAATGGGG
AGTCGCTAACCAAAAAAATTAA

Upstream 100 bases:

>100_bases
TCTCTCCTTTACTTCAAAGTAAGGTTAGTATAAACTGGGCACAAATTAAAAAGTAGTACGCACTATTTTGATAGGTACTA
CCCGAAAGGATAGTGTAAAG

Downstream 100 bases:

>100_bases
ATCGAGTTTTCTAATGGCCAAAGGCTGTCTTTTTAAACGTACAAATAGCTAGTCTTTTTCCGGATACTTGTTTGAGGAGA
TTGTAAAACTTAAATGAAGA

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 113; Mature: 112

Protein sequence:

>113_residues
MSMAEYKGKVKHIQDTPFGYTLSVIGGKWKMVIIYLLAENETVRFNELKRQIGTITYKTLSSQLKELEADGMVKRKEYPQ
IPPKVEYSLTEKAETLLPVLEELCEWGVANQKN

Sequences:

>Translated_113_residues
MSMAEYKGKVKHIQDTPFGYTLSVIGGKWKMVIIYLLAENETVRFNELKRQIGTITYKTLSSQLKELEADGMVKRKEYPQ
IPPKVEYSLTEKAETLLPVLEELCEWGVANQKN
>Mature_112_residues
SMAEYKGKVKHIQDTPFGYTLSVIGGKWKMVIIYLLAENETVRFNELKRQIGTITYKTLSSQLKELEADGMVKRKEYPQI
PPKVEYSLTEKAETLLPVLEELCEWGVANQKN

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082391, Length=93, Percent_Identity=36.5591397849462, Blast_Score=67, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 12997; Mature: 12866

Theoretical pI: Translated: 8.41; Mature: 8.41

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMAEYKGKVKHIQDTPFGYTLSVIGGKWKMVIIYLLAENETVRFNELKRQIGTITYKTL
CCCHHHCCCCCCCCCCCCCEEEEEECCCEEEEEEEEEECCCEEHHHHHHHHHHHHHHHHH
SSQLKELEADGMVKRKEYPQIPPKVEYSLTEKAETLLPVLEELCEWGVANQKN
HHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SMAEYKGKVKHIQDTPFGYTLSVIGGKWKMVIIYLLAENETVRFNELKRQIGTITYKTL
CCHHHCCCCCCCCCCCCCEEEEEECCCEEEEEEEEEECCCEEHHHHHHHHHHHHHHHHH
SSQLKELEADGMVKRKEYPQIPPKVEYSLTEKAETLLPVLEELCEWGVANQKN
HHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10086842; 11058132 [H]