| Definition | Bacillus clausii KSM-K16, complete genome. |
|---|---|
| Accession | NC_006582 |
| Length | 4,303,871 |
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The map label for this gene is 56963140
Identifier: 56963140
GI number: 56963140
Start: 1485580
End: 1487955
Strand: Direct
Name: 56963140
Synonym: ABC1368
Alternate gene names: NA
Gene position: 1485580-1487955 (Clockwise)
Preceding gene: 56963139
Following gene: 56963141
Centisome position: 34.52
GC content: 43.06
Gene sequence:
>2376_bases ATGCAGTATCAATTCCATAACATACCGCAAGAGCTGCGCGACTTTCCACAGTGGATTGTATGGCGCAAGGAGACGCGGAA GGGTAAGACAACCAAAGTGCCTTATAAAGCTGATGGACGGCACGCGAAAGCAAATGATAAACAGCATTGGACAACATTTG AGAATGCAGTAAAAGCGTATGAAAAAGGCGAGTTTGACGGAATAGGGTTTATGTTTTCCTCTGATGATCCATTCATAGGA ATTGACTTAGATCATTGTATTGAAGATGGTGCTTACTCAGACGATGCAAGGAAAATAGTTGATCAGTTAGACAGCTATAC GGAATTATCGCCTAGTGGTGATGGCCTACACATTATCGTTAAAGGCAAAATCCCTTTGCGTGGTCCAGGAACAGGGAAGA AAAACGTCGAGCGCGGCATTGAAGTATATAGGCACGGAAGGTACTTCACCTTTACTGGTAACGTTGTTCACTCTACAGGA GTTCAAGAGCGATCCGATGCCCTTAAAGACTTCTGGCAAGCTTACATGGAAGAGAAACCGAAGAAGGTGTCAACGCCTTC GCCGCCACAGCAACGAACAAGAACAAGCGATCTGAGCGAACGTGAGCTATGGGAGAAGATGTTCAATAGCAAGAAGGGGG CAGATATTAAAGCTCTATTCGATGGACATTTAATCAATGACGATCATTCTTCGTCCGACTTAGCTTTGTGTAATCACTTA GCTTTTTGGACAGACGCCGACGAAGCAAAGATGGATCGTATGTTTCGCGAGTCCGGTTTAATGCGTGACAAGTGGGATAG ACAGGCAAACAGCGACGGGAGTACATACGGCCAGATAACAATTCGCAATGCAGCGAGTCAATGTCCGTCAACTATTTCGG ATTTTGTACCGCAGCAGCGGGAGCCGTATCAGGTTTTCTTCCCACAGGCTGGAGATGATGAATTCAAATCTTCAAAGCCT TTCTTTCGACTAAGTGAATTAGGAAATGCAGAGAGGATTGTCTATGAACACGGTAAGGACATTAAATACTGTCCTGAGCG AGAATGGCTTATATGGGACGGAAAAAGATGGATTGAGGATAGCAAAAAGGAAATCGAGTCCATTACAGCCAGGACGTTAA GAGCGATATACAAAGAAGCAAATCAAGCGAGTCAAGATGATGATAAACAAATGGCTAAAAAGCTATATGATTGGGCACAG AAATGCGAAAGGCGATCAGTTAGGGTCAATTCTATTTTAGACATGCGGCCAATGGTATCAGTAACAAACGAAGAATTAGA CAAGCACCCCTATCTATTCAACTGTAAGAACGGCGTGATTGATCTAAAAACAGGTGAGTTGCTGTCACATGATCGTAAGT ACTTATTTACTAAAATAAGTGACGTTGAGTACGACAAAAGTGCCAAATGCCCTAACTGGATCAAATTTCTTGAGTCTATT TTCCAGGATGATCAAGGGAATGTGGATTACGAATTAATCCGGTTTATGCAAAAAGCAATTGGTTACACGTTGACAGGCGA CATAAGCGAGCAGCAAATGTTCTTCTTGTTCGGGACAGGCCGCAACGGTAAATCAACCTTTATCAATACAATCCAGCGCA TCTTAGGGGCCTACGGTAAACAGACAAACTCAGATACGTTCATTCGAAAAAAGAACGACAGTGGCATTAACAACGATATT GCCCGATTGGACAAGGCGCGTTTTGTGAGCGCTGTGGAAAGCGAAGAAGGCCAGCAGTTGAGTGAAAGCTTAGTTAAACA AATCACGGGTGGAGAACGAATGACGGCGCGGTTTATGCGTCAAGAGTTTTTCGAGTTTACCCCAGAATTTAAGGTCTTTT TCACCACCAACCACCCCCCTGTTATCAGAGGAAGCGACGAAGGGATTTGGCGCCGTATCTGTCAGATACCGTTTAAAGTG ACGATTCCAAAAAGCCAAGTTGATCGTCGTTTGCCGCAGAAATTGGAAGCTGAAATGCCTGGAATATTGGCCTGGGCTGT GGAAGGCTGCCTGCTGTGGCAGAAGGAGGGGCTGGAACATCCAAAATCAATTAAACAAGCAACACAAGCTTACCGTGAAG ACATGGATATTTTGGGACCTTTCCTAGAAGAAAAATGTATTGTATCCGAAATTGCAGAAATCGAAGCTAAAGAGATTTAT AACGAATACAAGGATTTCTGCTTTAAAAATGGTGAATTCGAATTAAAGAACCGCGCTTTTTATCGCCTGCTAGAAAGTAG AGGTTTTAAAAAGAAAAAAGGAGCTAAAAACAAAACTTTTTTTGTGGGTGTGTCCCTTTTAAAGAAGAATCCAGACTTGC GGGTTATCGAACGGGTTACTGAATTTGATAGCAAAAAAGATACTAAAAAGCTTTGA
Upstream 100 bases:
>100_bases AGATATGGATGTTAATATCTCGTCTGACGATGTGCCTTTTTAATCAAGCCATACCATGAGGGGCTTAGTCCCCTCTTTAC CCTAAAGGAGAGTCGGTTAC
Downstream 100 bases:
>100_bases AACTCTTGTTGCATTAAGGTTTATCCGATTTGGGTTACTAAGGGTTACTGAATTTTCTATGTTAGGTCTTATAGAAAAAT AAATAAATACTATATAGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: Phage/Plasmid Primase P4 Family; DNA Primase/Helicase; Primase; Phage DNA Polymerase; DNA Primase; Phage Primase; Phage/Plasmid Primase; Phage-Associated Protein; Phage DNA-Polymerase Or DNA-Primase; Phage/Plasmid DNA Primase; Phage-Like Protein; Nucleoside Triphosphatase D5 Family; Phage/Plasmid Primase P4-Like; Bacteriophage-Related Protein; Phage-Related DNA Primase/Helicase; Phage Or Plasmid Primase P4-Like; D5 N-Terminal Domain Family Protein; Phage Associated DNA Primase; Primase Superantigen-Encoding Pathogenicity Islands SaPI; DNA-Polymerase Or DNA-Primase; Bacteriophage Related Protein; DNA Primase Phage/Plasmid; Phage/Plasmid Primase P4-Like Protein; Prophage; Bacteriophage Protein-Like Protein; Plasmid/Phage Primase; Bacteriophage Protein; Conjugative Transposon DNA Recombination Protein; Primase P4-Like Protein; Helicase
Number of amino acids: Translated: 791; Mature: 791
Protein sequence:
>791_residues MQYQFHNIPQELRDFPQWIVWRKETRKGKTTKVPYKADGRHAKANDKQHWTTFENAVKAYEKGEFDGIGFMFSSDDPFIG IDLDHCIEDGAYSDDARKIVDQLDSYTELSPSGDGLHIIVKGKIPLRGPGTGKKNVERGIEVYRHGRYFTFTGNVVHSTG VQERSDALKDFWQAYMEEKPKKVSTPSPPQQRTRTSDLSERELWEKMFNSKKGADIKALFDGHLINDDHSSSDLALCNHL AFWTDADEAKMDRMFRESGLMRDKWDRQANSDGSTYGQITIRNAASQCPSTISDFVPQQREPYQVFFPQAGDDEFKSSKP FFRLSELGNAERIVYEHGKDIKYCPEREWLIWDGKRWIEDSKKEIESITARTLRAIYKEANQASQDDDKQMAKKLYDWAQ KCERRSVRVNSILDMRPMVSVTNEELDKHPYLFNCKNGVIDLKTGELLSHDRKYLFTKISDVEYDKSAKCPNWIKFLESI FQDDQGNVDYELIRFMQKAIGYTLTGDISEQQMFFLFGTGRNGKSTFINTIQRILGAYGKQTNSDTFIRKKNDSGINNDI ARLDKARFVSAVESEEGQQLSESLVKQITGGERMTARFMRQEFFEFTPEFKVFFTTNHPPVIRGSDEGIWRRICQIPFKV TIPKSQVDRRLPQKLEAEMPGILAWAVEGCLLWQKEGLEHPKSIKQATQAYREDMDILGPFLEEKCIVSEIAEIEAKEIY NEYKDFCFKNGEFELKNRAFYRLLESRGFKKKKGAKNKTFFVGVSLLKKNPDLRVIERVTEFDSKKDTKKL
Sequences:
>Translated_791_residues MQYQFHNIPQELRDFPQWIVWRKETRKGKTTKVPYKADGRHAKANDKQHWTTFENAVKAYEKGEFDGIGFMFSSDDPFIG IDLDHCIEDGAYSDDARKIVDQLDSYTELSPSGDGLHIIVKGKIPLRGPGTGKKNVERGIEVYRHGRYFTFTGNVVHSTG VQERSDALKDFWQAYMEEKPKKVSTPSPPQQRTRTSDLSERELWEKMFNSKKGADIKALFDGHLINDDHSSSDLALCNHL AFWTDADEAKMDRMFRESGLMRDKWDRQANSDGSTYGQITIRNAASQCPSTISDFVPQQREPYQVFFPQAGDDEFKSSKP FFRLSELGNAERIVYEHGKDIKYCPEREWLIWDGKRWIEDSKKEIESITARTLRAIYKEANQASQDDDKQMAKKLYDWAQ KCERRSVRVNSILDMRPMVSVTNEELDKHPYLFNCKNGVIDLKTGELLSHDRKYLFTKISDVEYDKSAKCPNWIKFLESI FQDDQGNVDYELIRFMQKAIGYTLTGDISEQQMFFLFGTGRNGKSTFINTIQRILGAYGKQTNSDTFIRKKNDSGINNDI ARLDKARFVSAVESEEGQQLSESLVKQITGGERMTARFMRQEFFEFTPEFKVFFTTNHPPVIRGSDEGIWRRICQIPFKV TIPKSQVDRRLPQKLEAEMPGILAWAVEGCLLWQKEGLEHPKSIKQATQAYREDMDILGPFLEEKCIVSEIAEIEAKEIY NEYKDFCFKNGEFELKNRAFYRLLESRGFKKKKGAKNKTFFVGVSLLKKNPDLRVIERVTEFDSKKDTKKL >Mature_791_residues MQYQFHNIPQELRDFPQWIVWRKETRKGKTTKVPYKADGRHAKANDKQHWTTFENAVKAYEKGEFDGIGFMFSSDDPFIG IDLDHCIEDGAYSDDARKIVDQLDSYTELSPSGDGLHIIVKGKIPLRGPGTGKKNVERGIEVYRHGRYFTFTGNVVHSTG VQERSDALKDFWQAYMEEKPKKVSTPSPPQQRTRTSDLSERELWEKMFNSKKGADIKALFDGHLINDDHSSSDLALCNHL AFWTDADEAKMDRMFRESGLMRDKWDRQANSDGSTYGQITIRNAASQCPSTISDFVPQQREPYQVFFPQAGDDEFKSSKP FFRLSELGNAERIVYEHGKDIKYCPEREWLIWDGKRWIEDSKKEIESITARTLRAIYKEANQASQDDDKQMAKKLYDWAQ KCERRSVRVNSILDMRPMVSVTNEELDKHPYLFNCKNGVIDLKTGELLSHDRKYLFTKISDVEYDKSAKCPNWIKFLESI FQDDQGNVDYELIRFMQKAIGYTLTGDISEQQMFFLFGTGRNGKSTFINTIQRILGAYGKQTNSDTFIRKKNDSGINNDI ARLDKARFVSAVESEEGQQLSESLVKQITGGERMTARFMRQEFFEFTPEFKVFFTTNHPPVIRGSDEGIWRRICQIPFKV TIPKSQVDRRLPQKLEAEMPGILAWAVEGCLLWQKEGLEHPKSIKQATQAYREDMDILGPFLEEKCIVSEIAEIEAKEIY NEYKDFCFKNGEFELKNRAFYRLLESRGFKKKKGAKNKTFFVGVSLLKKNPDLRVIERVTEFDSKKDTKKL
Specific function: Unknown
COG id: COG3378
COG function: function code R; Predicted ATPase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 91686; Mature: 91686
Theoretical pI: Translated: 7.90; Mature: 7.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQYQFHNIPQELRDFPQWIVWRKETRKGKTTKVPYKADGRHAKANDKQHWTTFENAVKAY CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHH EKGEFDGIGFMFSSDDPFIGIDLDHCIEDGAYSDDARKIVDQLDSYTELSPSGDGLHIIV HCCCCCCEEEEECCCCCEEECCHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEE KGKIPLRGPGTGKKNVERGIEVYRHGRYFTFTGNVVHSTGVQERSDALKDFWQAYMEEKP ECCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCEEECCCCHHHHHHHHHHHHHHHHCCC KKVSTPSPPQQRTRTSDLSERELWEKMFNSKKGADIKALFDGHLINDDHSSSDLALCNHL CCCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEECCEEECCCCCCCHHHHHHHH AFWTDADEAKMDRMFRESGLMRDKWDRQANSDGSTYGQITIRNAASQCPSTISDFVPQQR HHCCCCHHHHHHHHHHHCCCCHHHHHHCCCCCCCEEEEEEECCHHHHCHHHHHHHCCCCC EPYQVFFPQAGDDEFKSSKPFFRLSELGNAERIVYEHGKDIKYCPEREWLIWDGKRWIED CCCEEECCCCCCCHHCCCCCCEEHHHCCCCCEEHHHCCCCCCCCCCCCEEEECCHHHHHH SKKEIESITARTLRAIYKEANQASQDDDKQMAKKLYDWAQKCERRSVRVNSILDMRPMVS HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHH VTNEELDKHPYLFNCKNGVIDLKTGELLSHDRKYLFTKISDVEYDKSAKCPNWIKFLESI HHHHHHHCCCCEEECCCCEEECCCCHHHHCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHH FQDDQGNVDYELIRFMQKAIGYTLTGDISEQQMFFLFGTGRNGKSTFINTIQRILGAYGK HCCCCCCCCHHHHHHHHHHHCEEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCC QTNSDTFIRKKNDSGINNDIARLDKARFVSAVESEEGQQLSESLVKQITGGERMTARFMR CCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH QEFFEFTPEFKVFFTTNHPPVIRGSDEGIWRRICQIPFKVTIPKSQVDRRLPQKLEAEMP HHHHHCCCCEEEEEECCCCCEEECCCHHHHHHHHHCCCEEECCHHHHHHHCHHHHHHCCC GILAWAVEGCLLWQKEGLEHPKSIKQATQAYREDMDILGPFLEEKCIVSEIAEIEAKEIY CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NEYKDFCFKNGEFELKNRAFYRLLESRGFKKKKGAKNKTFFVGVSLLKKNPDLRVIERVT HHHHHHHHCCCCEEEHHHHHHHHHHHCCCCHHCCCCCCEEEEEEHHHHCCCCHHHHHHHH EFDSKKDTKKL HHCCCCCCCCC >Mature Secondary Structure MQYQFHNIPQELRDFPQWIVWRKETRKGKTTKVPYKADGRHAKANDKQHWTTFENAVKAY CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHH EKGEFDGIGFMFSSDDPFIGIDLDHCIEDGAYSDDARKIVDQLDSYTELSPSGDGLHIIV HCCCCCCEEEEECCCCCEEECCHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEE KGKIPLRGPGTGKKNVERGIEVYRHGRYFTFTGNVVHSTGVQERSDALKDFWQAYMEEKP ECCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCEEECCCCHHHHHHHHHHHHHHHHCCC KKVSTPSPPQQRTRTSDLSERELWEKMFNSKKGADIKALFDGHLINDDHSSSDLALCNHL CCCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEECCEEECCCCCCCHHHHHHHH AFWTDADEAKMDRMFRESGLMRDKWDRQANSDGSTYGQITIRNAASQCPSTISDFVPQQR HHCCCCHHHHHHHHHHHCCCCHHHHHHCCCCCCCEEEEEEECCHHHHCHHHHHHHCCCCC EPYQVFFPQAGDDEFKSSKPFFRLSELGNAERIVYEHGKDIKYCPEREWLIWDGKRWIED CCCEEECCCCCCCHHCCCCCCEEHHHCCCCCEEHHHCCCCCCCCCCCCEEEECCHHHHHH SKKEIESITARTLRAIYKEANQASQDDDKQMAKKLYDWAQKCERRSVRVNSILDMRPMVS HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHH VTNEELDKHPYLFNCKNGVIDLKTGELLSHDRKYLFTKISDVEYDKSAKCPNWIKFLESI HHHHHHHCCCCEEECCCCEEECCCCHHHHCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHH FQDDQGNVDYELIRFMQKAIGYTLTGDISEQQMFFLFGTGRNGKSTFINTIQRILGAYGK HCCCCCCCCHHHHHHHHHHHCEEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCC QTNSDTFIRKKNDSGINNDIARLDKARFVSAVESEEGQQLSESLVKQITGGERMTARFMR CCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH QEFFEFTPEFKVFFTTNHPPVIRGSDEGIWRRICQIPFKVTIPKSQVDRRLPQKLEAEMP HHHHHCCCCEEEEEECCCCCEEECCCHHHHHHHHHCCCEEECCHHHHHHHCHHHHHHCCC GILAWAVEGCLLWQKEGLEHPKSIKQATQAYREDMDILGPFLEEKCIVSEIAEIEAKEIY CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NEYKDFCFKNGEFELKNRAFYRLLESRGFKKKKGAKNKTFFVGVSLLKKNPDLRVIERVT HHHHHHHHCCCCEEEHHHHHHHHHHHCCCCHHCCCCCCEEEEEEHHHHCCCCHHHHHHHH EFDSKKDTKKL HHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA