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The map label for this gene is 56963087

Identifier: 56963087

GI number: 56963087

Start: 1432230

End: 1432757

Strand: Direct

Name: 56963087

Synonym: ABC1315

Alternate gene names: NA

Gene position: 1432230-1432757 (Clockwise)

Preceding gene: 56963086

Following gene: 56963088

Centisome position: 33.28

GC content: 43.37

Gene sequence:

>528_bases
ATGAGCTTTCCTAAGGAAGGCAGCACTATCCAGATACACAGCTACAAGCATAATGGGAAGCTTCACCGCATTTGGGAAGA
TACGATTGTGTTGAAAGGAACGTCTAAAGTCGTAGTAGCAGGAAATGACCGTATCATTGTCAGGGAAGCGGACGGAAGAA
ATTGGCGGACGCGTGAACCAGCGATTTGTTATTTTGATGCCGAGCAATGGTTCAACATGATTTGCATGCTTCGCGCTGAT
GGCATTTATTACTACTGCAATCTTGGAACGCCTTTTACATGGGATGAAGAAGCGTTGAAGTATATTGATTATGACTTGGA
CATTAAAGTGTATCCGGATATGACGATGAAGCTGCTCGATGAAGATGAATACGAACTGCATAGCAAGCTCATGAAGTATC
CGCCAGAACTTGATGTTATATTACGAAAAAGTGTAGACGAGCTTATATCGTGGATTCACCAGAGAAAAGGGCCGTTTGCG
CCCCAATTTGTAGAAAACTGGTACGAACGGTATTTGCAATACCGCTAA

Upstream 100 bases:

>100_bases
AAATACGACCTGAACCTTGTATAATAGAGGATGTACATTCAAATTGTGAAGGATAGCAGAAGAGTCTGCGTGTGTGGAAA
TTGAGAGAAAGGAGCCCGCT

Downstream 100 bases:

>100_bases
GAGCCTGAGCCTTCAGGCTTTCTTTATAGAAAAAGAAGGGGTTTACTTGAAGACAATCAAAAGGTATTTGGTGTTTGTAA
AGCCATACCGCAAAGAAATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 175; Mature: 174

Protein sequence:

>175_residues
MSFPKEGSTIQIHSYKHNGKLHRIWEDTIVLKGTSKVVVAGNDRIIVREADGRNWRTREPAICYFDAEQWFNMICMLRAD
GIYYYCNLGTPFTWDEEALKYIDYDLDIKVYPDMTMKLLDEDEYELHSKLMKYPPELDVILRKSVDELISWIHQRKGPFA
PQFVENWYERYLQYR

Sequences:

>Translated_175_residues
MSFPKEGSTIQIHSYKHNGKLHRIWEDTIVLKGTSKVVVAGNDRIIVREADGRNWRTREPAICYFDAEQWFNMICMLRAD
GIYYYCNLGTPFTWDEEALKYIDYDLDIKVYPDMTMKLLDEDEYELHSKLMKYPPELDVILRKSVDELISWIHQRKGPFA
PQFVENWYERYLQYR
>Mature_174_residues
SFPKEGSTIQIHSYKHNGKLHRIWEDTIVLKGTSKVVVAGNDRIIVREADGRNWRTREPAICYFDAEQWFNMICMLRADG
IYYYCNLGTPFTWDEEALKYIDYDLDIKVYPDMTMKLLDEDEYELHSKLMKYPPELDVILRKSVDELISWIHQRKGPFAP
QFVENWYERYLQYR

Specific function: Unknown

COG id: COG3557

COG function: function code J; Uncharacterized domain/protein associated with RNAses G and E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0374 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1315_BACSK (Q5WIF2)

Other databases:

- EMBL:   AP006627
- RefSeq:   YP_174814.1
- ProteinModelPortal:   Q5WIF2
- STRING:   Q5WIF2
- EnsemblBacteria:   EBBACT00000048201
- GeneID:   3200989
- GenomeReviews:   AP006627_GR
- KEGG:   bcl:ABC1315
- NMPDR:   fig|66692.3.peg.1133
- eggNOG:   COG3557
- GeneTree:   EBGT00050000002708
- HOGENOM:   HBG288296
- OMA:   RTWVTRE
- ProtClustDB:   PRK13662
- BioCyc:   BCLA66692:ABC1315-MONOMER
- HAMAP:   MF_01568
- InterPro:   IPR007295
- InterPro:   IPR016882
- PIRSF:   PIRSF028345

Pfam domain/function: PF04167 DUF402

EC number: NA

Molecular weight: Translated: 21031; Mature: 20900

Theoretical pI: Translated: 5.65; Mature: 5.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFPKEGSTIQIHSYKHNGKLHRIWEDTIVLKGTSKVVVAGNDRIIVREADGRNWRTREP
CCCCCCCCEEEEEEEECCCEEEEEEECEEEEECCCEEEEECCCEEEEECCCCCCCCCCCC
AICYFDAEQWFNMICMLRADGIYYYCNLGTPFTWDEEALKYIDYDLDIKVYPDMTMKLLD
EEEEEEHHHHHHEEEEEEECCEEEEEECCCCCCCCHHHHHHCCCCCEEEECCCCEEEECC
EDEYELHSKLMKYPPELDVILRKSVDELISWIHQRKGPFAPQFVENWYERYLQYR
CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SFPKEGSTIQIHSYKHNGKLHRIWEDTIVLKGTSKVVVAGNDRIIVREADGRNWRTREP
CCCCCCCEEEEEEEECCCEEEEEEECEEEEECCCEEEEECCCEEEEECCCCCCCCCCCC
AICYFDAEQWFNMICMLRADGIYYYCNLGTPFTWDEEALKYIDYDLDIKVYPDMTMKLLD
EEEEEEHHHHHHEEEEEEECCEEEEEECCCCCCCCHHHHHHCCCCCEEEECCCCEEEECC
EDEYELHSKLMKYPPELDVILRKSVDELISWIHQRKGPFAPQFVENWYERYLQYR
CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA