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The map label for this gene is yjbG [H]

Identifier: 56963056

GI number: 56963056

Start: 1405728

End: 1407488

Strand: Direct

Name: yjbG [H]

Synonym: ABC1284

Alternate gene names: 56963056

Gene position: 1405728-1407488 (Clockwise)

Preceding gene: 56963055

Following gene: 56963057

Centisome position: 32.66

GC content: 43.84

Gene sequence:

>1761_bases
ATGCAATATCCAATAACATGGGATTTAGAATCGATTTTTGCAGGAGGAAGCCAGTCTGAGGCGTTTAGCGACTTCTTAAA
AGAAACAAACGGTTTGCTCGACCGTTGGCAGGAAACAGAAGCTGCTTCTGTGGACATACAAGAGCTTGTTACGGCAATTG
AACAAACTTTTCCTCGACTTGCCCATGCGAGTGCCTTTGTTTCTTGTTTGCTAGCACAAAATGTAAAGGACGAAACGGCG
CGTTTGCGCCAAGAGCAAGTACAAGAGCTTGAAGTCAAATGGCAAAAATTAAACTTGCTCCTTGAAGAAAAACTGAAACC
GATTGACGATCAAGCCTTTGCCTCTCTCCTTGAAGAAGAAGCAATGAAACCGTCAGCTTTTATGTTGGAAAAAGCGAGAA
AACGGGCAGCTGACAAAATGAGCGCAGACAAGGAAGAATTGGCAACCAAGTTGGCTAAAGACGGCTATCACGCCTGGGGA
TCCGTTTATAATGAAGCAGTCGGGCGAATGGAAATCCCGTTTGAAGAAAATGGGGAAGTGAAACATTTGTCGGCTGGACA
ACTCCATAACCGCTTATCGAATGAAGACCGTTCTGTGCGCAAACGTGCTTATGAAGCGTCGCTACAAGCATGGGCTCAGC
AAGCGCCATTGATTACACAAACATTAAATCGCCTTGCCGGTTTCCGTTTGAAGCTGTATGAAGAGCGGGGCTGGGACAAT
GTTTTGAAAGAACCATTGGACATAAATTTAATTTCCGAAGAAACATTAACAACGATGTGGGATACGATTACGAAAAACAA
GTCAAAACTATACCCATACATGGACAAAAAGGCAGAATTGTTAGGTTTGGAAAAACTTAGCTTGTTTGATGTCAACGCTC
CTTTGCCGACAAGCGAAACGTCTAAAAACGATATTCCGTACGAAGAAGCTTGTGAGCTGATCATCAAGCATTTTAACCGC
TTCAGCCCGAAAATGGCTGAATTTGCTGAAATGGCGCTTAGCAACGGTTGGGTCGAAGCTGAAAACCGCGCCGGAAAACG
CCCAGGCGGCTTTTGTACAACTTTTCCACTCCGTCAAGAATCGCGCATTTTTATGACCTATGACGGCTCAATGGACAATG
TTGCAACGCTCGCTCACGAACTGGGCCATGCGTACCATAGCTGGTGCTTAAAAGACATGCCTGTCACGTCGCAAAAACAG
TATCCAATGAGCATCGCCGAAACCGCCTCCACATTCGCCGAAATGATTGTCGCTGATGCACTTGTGTCTGAGGCAGAAAG
TCCAGATGTAAAACGATATTTGCTGGAAAACAAACTCTCTCGTTCATTAGCCTTTTTCATGAATATCCATTCCCGTTTTC
TGTTTGAAACGCGTTTTTATGAAGAACGCAAACAGGGGATTGTACCGACTGAACGTTTAAATGAATTGATGGTTGAGGCG
CAAAAAGAAGCATATGGCAATAAAGTAGAAGCATACGATCCTTATTTTTGGGCATCAAAATTGCATTTTCACATAACGAA
ACAACCGTTTTATAATTTCCCTTATACATTTGGCTATTTGTTTAGTATGGGCCTATATGCACGGGCCTTAAAAGCAGGCG
CTTCTTTTGAAGACAACTACATTGCGTTGCTGCAAGACAGTGGCAGCATGACAGCCGAACAACTAGCACAAAAGCATTTA
CAAGTCGATTTGACAAAACCGGACTTCTGGCAAGAAGCGATCGATGTTGTGCTAAAAGACAGCCATCAATTTGTCCAGTA
A

Upstream 100 bases:

>100_bases
GCAGCTTTTTCTTTGCCATCTAACGTGCAAAAAGCAGCCAATAGTGGTAGTATTTAAATTGTTACGGTAGACGAAATAAT
TTGACGACAGGAGGCTGTAT

Downstream 100 bases:

>100_bases
AAACAGCGGGGGTTAGCCTCCGCTGTTTTTTTGCGCAAGAATTAATAGTAGAAGGGGAACTTAGGTTTGAAGTAAAATAA
CAATAGAACATGGTCATCGA

Product: oligoendopeptidase F

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 586; Mature: 586

Protein sequence:

>586_residues
MQYPITWDLESIFAGGSQSEAFSDFLKETNGLLDRWQETEAASVDIQELVTAIEQTFPRLAHASAFVSCLLAQNVKDETA
RLRQEQVQELEVKWQKLNLLLEEKLKPIDDQAFASLLEEEAMKPSAFMLEKARKRAADKMSADKEELATKLAKDGYHAWG
SVYNEAVGRMEIPFEENGEVKHLSAGQLHNRLSNEDRSVRKRAYEASLQAWAQQAPLITQTLNRLAGFRLKLYEERGWDN
VLKEPLDINLISEETLTTMWDTITKNKSKLYPYMDKKAELLGLEKLSLFDVNAPLPTSETSKNDIPYEEACELIIKHFNR
FSPKMAEFAEMALSNGWVEAENRAGKRPGGFCTTFPLRQESRIFMTYDGSMDNVATLAHELGHAYHSWCLKDMPVTSQKQ
YPMSIAETASTFAEMIVADALVSEAESPDVKRYLLENKLSRSLAFFMNIHSRFLFETRFYEERKQGIVPTERLNELMVEA
QKEAYGNKVEAYDPYFWASKLHFHITKQPFYNFPYTFGYLFSMGLYARALKAGASFEDNYIALLQDSGSMTAEQLAQKHL
QVDLTKPDFWQEAIDVVLKDSHQFVQ

Sequences:

>Translated_586_residues
MQYPITWDLESIFAGGSQSEAFSDFLKETNGLLDRWQETEAASVDIQELVTAIEQTFPRLAHASAFVSCLLAQNVKDETA
RLRQEQVQELEVKWQKLNLLLEEKLKPIDDQAFASLLEEEAMKPSAFMLEKARKRAADKMSADKEELATKLAKDGYHAWG
SVYNEAVGRMEIPFEENGEVKHLSAGQLHNRLSNEDRSVRKRAYEASLQAWAQQAPLITQTLNRLAGFRLKLYEERGWDN
VLKEPLDINLISEETLTTMWDTITKNKSKLYPYMDKKAELLGLEKLSLFDVNAPLPTSETSKNDIPYEEACELIIKHFNR
FSPKMAEFAEMALSNGWVEAENRAGKRPGGFCTTFPLRQESRIFMTYDGSMDNVATLAHELGHAYHSWCLKDMPVTSQKQ
YPMSIAETASTFAEMIVADALVSEAESPDVKRYLLENKLSRSLAFFMNIHSRFLFETRFYEERKQGIVPTERLNELMVEA
QKEAYGNKVEAYDPYFWASKLHFHITKQPFYNFPYTFGYLFSMGLYARALKAGASFEDNYIALLQDSGSMTAEQLAQKHL
QVDLTKPDFWQEAIDVVLKDSHQFVQ
>Mature_586_residues
MQYPITWDLESIFAGGSQSEAFSDFLKETNGLLDRWQETEAASVDIQELVTAIEQTFPRLAHASAFVSCLLAQNVKDETA
RLRQEQVQELEVKWQKLNLLLEEKLKPIDDQAFASLLEEEAMKPSAFMLEKARKRAADKMSADKEELATKLAKDGYHAWG
SVYNEAVGRMEIPFEENGEVKHLSAGQLHNRLSNEDRSVRKRAYEASLQAWAQQAPLITQTLNRLAGFRLKLYEERGWDN
VLKEPLDINLISEETLTTMWDTITKNKSKLYPYMDKKAELLGLEKLSLFDVNAPLPTSETSKNDIPYEEACELIIKHFNR
FSPKMAEFAEMALSNGWVEAENRAGKRPGGFCTTFPLRQESRIFMTYDGSMDNVATLAHELGHAYHSWCLKDMPVTSQKQ
YPMSIAETASTFAEMIVADALVSEAESPDVKRYLLENKLSRSLAFFMNIHSRFLFETRFYEERKQGIVPTERLNELMVEA
QKEAYGNKVEAYDPYFWASKLHFHITKQPFYNFPYTFGYLFSMGLYARALKAGASFEDNYIALLQDSGSMTAEQLAQKHL
QVDLTKPDFWQEAIDVVLKDSHQFVQ

Specific function: Unknown

COG id: COG1164

COG function: function code E; Oligoendopeptidase F

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M3B family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001567
- InterPro:   IPR004438
- InterPro:   IPR013647 [H]

Pfam domain/function: PF01432 Peptidase_M3; PF08439 Peptidase_M3_N [H]

EC number: NA

Molecular weight: Translated: 67164; Mature: 67164

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQYPITWDLESIFAGGSQSEAFSDFLKETNGLLDRWQETEAASVDIQELVTAIEQTFPRL
CCCCCEECHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
AHASAFVSCLLAQNVKDETARLRQEQVQELEVKWQKLNLLLEEKLKPIDDQAFASLLEEE
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
AMKPSAFMLEKARKRAADKMSADKEELATKLAKDGYHAWGSVYNEAVGRMEIPFEENGEV
CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHCCEECCCCCCCCE
KHLSAGQLHNRLSNEDRSVRKRAYEASLQAWAQQAPLITQTLNRLAGFRLKLYEERGWDN
EECCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEEHHCCCHH
VLKEPLDINLISEETLTTMWDTITKNKSKLYPYMDKKAELLGLEKLSLFDVNAPLPTSET
HHCCCCCEEEECHHHHHHHHHHHHCCCHHCCCCCCCHHHHHCCHHHEEEECCCCCCCCCC
SKNDIPYEEACELIIKHFNRFSPKMAEFAEMALSNGWVEAENRAGKRPGGFCTTFPLRQE
CCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEECCCCCCCCCCCCEEECCCCCC
SRIFMTYDGSMDNVATLAHELGHAYHSWCLKDMPVTSQKQYPMSIAETASTFAEMIVADA
CEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
LVSEAESPDVKRYLLENKLSRSLAFFMNIHSRFLFETRFYEERKQGIVPTERLNELMVEA
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
QKEAYGNKVEAYDPYFWASKLHFHITKQPFYNFPYTFGYLFSMGLYARALKAGASFEDNY
HHHHCCCCCCCCCCCHHHCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCE
IALLQDSGSMTAEQLAQKHLQVDLTKPDFWQEAIDVVLKDSHQFVQ
EEEEECCCCCHHHHHHHHHHEEECCCCHHHHHHHHHHHHCCHHHCC
>Mature Secondary Structure
MQYPITWDLESIFAGGSQSEAFSDFLKETNGLLDRWQETEAASVDIQELVTAIEQTFPRL
CCCCCEECHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
AHASAFVSCLLAQNVKDETARLRQEQVQELEVKWQKLNLLLEEKLKPIDDQAFASLLEEE
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
AMKPSAFMLEKARKRAADKMSADKEELATKLAKDGYHAWGSVYNEAVGRMEIPFEENGEV
CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHCCEECCCCCCCCE
KHLSAGQLHNRLSNEDRSVRKRAYEASLQAWAQQAPLITQTLNRLAGFRLKLYEERGWDN
EECCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEEHHCCCHH
VLKEPLDINLISEETLTTMWDTITKNKSKLYPYMDKKAELLGLEKLSLFDVNAPLPTSET
HHCCCCCEEEECHHHHHHHHHHHHCCCHHCCCCCCCHHHHHCCHHHEEEECCCCCCCCCC
SKNDIPYEEACELIIKHFNRFSPKMAEFAEMALSNGWVEAENRAGKRPGGFCTTFPLRQE
CCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEECCCCCCCCCCCCEEECCCCCC
SRIFMTYDGSMDNVATLAHELGHAYHSWCLKDMPVTSQKQYPMSIAETASTFAEMIVADA
CEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
LVSEAESPDVKRYLLENKLSRSLAFFMNIHSRFLFETRFYEERKQGIVPTERLNELMVEA
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
QKEAYGNKVEAYDPYFWASKLHFHITKQPFYNFPYTFGYLFSMGLYARALKAGASFEDNY
HHHHCCCCCCCCCCCHHHCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCE
IALLQDSGSMTAEQLAQKHLQVDLTKPDFWQEAIDVVLKDSHQFVQ
EEEEECCCCCHHHHHHHHHHEEECCCCHHHHHHHHHHHHCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]