Definition Thermus thermophilus HB8 chromosome, complete genome.
Accession NC_006461
Length 1,849,742

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The map label for this gene is 55981860

Identifier: 55981860

GI number: 55981860

Start: 1774484

End: 1775506

Strand: Direct

Name: 55981860

Synonym: TTHA1891

Alternate gene names: NA

Gene position: 1774484-1775506 (Clockwise)

Preceding gene: 55981858

Following gene: 55981864

Centisome position: 95.93

GC content: 73.22

Gene sequence:

>1023_bases
ATGGAAGAACCCAAGATCACGCCCCTGGCCCGGCGCCTGGCGGAGGAAAACGGCATAGACTGGCGGAAGCTTCAGGGCAC
GGGCCCCGACGGGCTCATCGTGGAGCGGGACATCCTGGCCTACCTGGCCAAGGTCATGGCCGGGGAGGTGGACCTCCCCC
CCCAGCCCGAGGCCCCGCCCCCGCCCCCCAAGGAGGAGGAACTGAAGCGGGCCCAGGAGGTCCTGGGCCGGGAAGGGGTG
GACCTCGCCGAGGTGATCCCCCAGGAGCCCGAGCCCACCCCCCCGCCCCTCACCTTGGAGGAAGAGGAGCTGGACTTCCC
CGAGGTGGAGCTGGACCTCTCCTTAGAGGAGGAAGAGGTCCTCTTGGCGGAGGAGCCGGAGGCCGTGCCCCTCGAGGCCT
GGGAGGAGGAGAAGCCCCCCGTGGAAGCCCCCCAGGAGCCCCAGGAGGAGGCCTGGGAGGAGGACCTCCTCCTCGCCGAG
GAGCCCTCCCCGGCCCCGGAGGAGGCGCCCCCGGCCCCAGAACCCCTCCCCCCCTGGCCCCAGGCCCAGGCGGAGGAAGG
GATCGCGGCGGCCCCCGTGGCCCCTCCCCCGGCCCCCCTCACGCTCCTCCGCGTCCACCGCAGGCGGGTGGCCCTCGAGG
CCCTGGAGGAGGCCGTGGCCCTCTTCCATCGGGTCCACGGGGTGCCCAAGACCCCCCTCCCCTTCCTCCTCCGGGCCGCG
GAGCGGGCCCTCGCGGAGCTGGAAATCCCCTTGCGGCCCCTCGTGGGCCAGGTGGAGGGCGAGGAGGTGCGGGGGCTTAA
GCCTTCCCCGAGCTTCCTCGCCCTCTTCCGGGAGGCGGGCGGGGAGGAAGGGGAAGGTCTCCTCTGCTTCCACGGGGAGG
AGGAGGTGCACACCGGCCGCCCAAGCCTCTTCCTCTCCCCCGAAGGCCTCCTCGCCGCCTCGGGGCTGGAAGCCCCCCTG
GCGAGGAAGCTCCTGGAGCGGGTGGCCCTCTACCTGGAAAACCCCCTCCTCCTCCTGGCCTAG

Upstream 100 bases:

>100_bases
TCCGCCTCCACGAGGACGGTCTCGCCGCTTTGGGCCTCGAGGCAGTACGCCGCCAAAAGCTCAGCGAAGCGCGCTTCCAC
CCTGCTATCATAGGACCAAG

Downstream 100 bases:

>100_bases
GGGCGCTTCACCTCCGCTTCCGCTTCCGCCCCCCGGGGACGGGCTCAGGGGCCCTTACGCCCTGGAGGCGGGCCTCGAGG
GCCCGGATCTCGTCCCTAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 340; Mature: 340

Protein sequence:

>340_residues
MEEPKITPLARRLAEENGIDWRKLQGTGPDGLIVERDILAYLAKVMAGEVDLPPQPEAPPPPPKEEELKRAQEVLGREGV
DLAEVIPQEPEPTPPPLTLEEEELDFPEVELDLSLEEEEVLLAEEPEAVPLEAWEEEKPPVEAPQEPQEEAWEEDLLLAE
EPSPAPEEAPPAPEPLPPWPQAQAEEGIAAAPVAPPPAPLTLLRVHRRRVALEALEEAVALFHRVHGVPKTPLPFLLRAA
ERALAELEIPLRPLVGQVEGEEVRGLKPSPSFLALFREAGGEEGEGLLCFHGEEEVHTGRPSLFLSPEGLLAASGLEAPL
ARKLLERVALYLENPLLLLA

Sequences:

>Translated_340_residues
MEEPKITPLARRLAEENGIDWRKLQGTGPDGLIVERDILAYLAKVMAGEVDLPPQPEAPPPPPKEEELKRAQEVLGREGV
DLAEVIPQEPEPTPPPLTLEEEELDFPEVELDLSLEEEEVLLAEEPEAVPLEAWEEEKPPVEAPQEPQEEAWEEDLLLAE
EPSPAPEEAPPAPEPLPPWPQAQAEEGIAAAPVAPPPAPLTLLRVHRRRVALEALEEAVALFHRVHGVPKTPLPFLLRAA
ERALAELEIPLRPLVGQVEGEEVRGLKPSPSFLALFREAGGEEGEGLLCFHGEEEVHTGRPSLFLSPEGLLAASGLEAPL
ARKLLERVALYLENPLLLLA
>Mature_340_residues
MEEPKITPLARRLAEENGIDWRKLQGTGPDGLIVERDILAYLAKVMAGEVDLPPQPEAPPPPPKEEELKRAQEVLGREGV
DLAEVIPQEPEPTPPPLTLEEEELDFPEVELDLSLEEEEVLLAEEPEAVPLEAWEEEKPPVEAPQEPQEEAWEEDLLLAE
EPSPAPEEAPPAPEPLPPWPQAQAEEGIAAAPVAPPPAPLTLLRVHRRRVALEALEEAVALFHRVHGVPKTPLPFLLRAA
ERALAELEIPLRPLVGQVEGEEVRGLKPSPSFLALFREAGGEEGEGLLCFHGEEEVHTGRPSLFLSPEGLLAASGLEAPL
ARKLLERVALYLENPLLLLA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37242; Mature: 37242

Theoretical pI: Translated: 4.00; Mature: 4.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEEPKITPLARRLAEENGIDWRKLQGTGPDGLIVERDILAYLAKVMAGEVDLPPQPEAPP
CCCCCCCHHHHHHHHHCCCCEEEECCCCCCCEEEHHHHHHHHHHHHHCCCCCCCCCCCCC
PPPKEEELKRAQEVLGREGVDLAEVIPQEPEPTPPPLTLEEEELDFPEVELDLSLEEEEV
CCCCHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCE
LLAEEPEAVPLEAWEEEKPPVEAPQEPQEEAWEEDLLLAEEPSPAPEEAPPAPEPLPPWP
EEECCCCCCCCHHCCCCCCCCCCCCCHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCCCC
QAQAEEGIAAAPVAPPPAPLTLLRVHRRRVALEALEEAVALFHRVHGVPKTPLPFLLRAA
CHHHHCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
ERALAELEIPLRPLVGQVEGEEVRGLKPSPSFLALFREAGGEEGEGLLCFHGEEEVHTGR
HHHHHHHCCCHHHHHCCCCCCHHCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCHHHCCC
PSLFLSPEGLLAASGLEAPLARKLLERVALYLENPLLLLA
CCEEECCCCCEECCCCCCHHHHHHHHHHHHHHCCCEEEEC
>Mature Secondary Structure
MEEPKITPLARRLAEENGIDWRKLQGTGPDGLIVERDILAYLAKVMAGEVDLPPQPEAPP
CCCCCCCHHHHHHHHHCCCCEEEECCCCCCCEEEHHHHHHHHHHHHHCCCCCCCCCCCCC
PPPKEEELKRAQEVLGREGVDLAEVIPQEPEPTPPPLTLEEEELDFPEVELDLSLEEEEV
CCCCHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCE
LLAEEPEAVPLEAWEEEKPPVEAPQEPQEEAWEEDLLLAEEPSPAPEEAPPAPEPLPPWP
EEECCCCCCCCHHCCCCCCCCCCCCCHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCCCC
QAQAEEGIAAAPVAPPPAPLTLLRVHRRRVALEALEEAVALFHRVHGVPKTPLPFLLRAA
CHHHHCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
ERALAELEIPLRPLVGQVEGEEVRGLKPSPSFLALFREAGGEEGEGLLCFHGEEEVHTGR
HHHHHHHCCCHHHHHCCCCCCHHCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCHHHCCC
PSLFLSPEGLLAASGLEAPLARKLLERVALYLENPLLLLA
CCEEECCCCCEECCCCCCHHHHHHHHHHHHHHCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA