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The map label for this gene is yurM [H]

Identifier: 55981855

GI number: 55981855

Start: 1769644

End: 1770429

Strand: Reverse

Name: yurM [H]

Synonym: TTHA1886

Alternate gene names: 55981855

Gene position: 1770429-1769644 (Counterclockwise)

Preceding gene: 55981859

Following gene: 55981854

Centisome position: 95.71

GC content: 69.08

Gene sequence:

>786_bases
GTGGGCCGCTTCCTCCGGCACGCCTTGGCGCTTGCGGTGCTCCTTGCCGTCCTCCTCCCCTTCCTCTGGATGGCCTACGC
CGCCTTCATGCCCAAGGAGGCGGTGTACTCGGGGGAGCTCTTCTCCCGGGTGGGCTTCAGCCTGGAGAACGTGCGGGCCC
TGGCCCGGGAGGGCTTCTGGGGACGCCTCCTCTTCTCCTTGGGGGTGTCCTCTGGGGCGGTGGCCTTGGAGCTTTTCACC
GCCCTCTTCGCCGCCTACGCCCTGAGGGCGGGCCTGGGGCTTCTCCCCTTCTACCTGGTCCTGATGGCGATCCCGGCGGA
GCTCCTCCTCGTGCCCCTTTACGGGGTCCTGAAAGACCTCTCCCTGCTGGAGACCTTCTGGGCCCTGCTCCTGCCCTTCG
CCGCGAGCCCCTTCGTCATCTACCTCGTCTACCAGGGCATGCGGGCCGTGCCTGAGGAGCTTCTGGAGGCGGCCAAGCTG
GACGGGGCCGGGCACCGGGTCCTCCTCTTCCGCATCCTCCTCCCCCTGGTGCGCCCCACCCTGGTGGCGGCCGGGGTTTT
GGCCTTCGCCGCCCACTGGAACCTGGTCCTCTACCCCCGGGTGGTGGTCTCCGACCCGGGGCTTTGGACGCTCCAGACCT
GGCTCACGGACCTGCAGCGCAAGTACCCCACGGACTGGGGCCTCCTCTCGGCGGCGGCCCTCCTCAGCGTCCTCCCCATC
GCCCTCCTCTACCTCCTCTTTGAGCGGCGGGTGGTGGCCACCTTTGAGGAAGGGCTAAAGGGGTAG

Upstream 100 bases:

>100_bases
ATCATGGTGCAGAGGGGCCCCGCCAGGACCCGGGAGAGGTCCAGGACCTTGAGGCCGGAAAGGGGCTTCATAGGGGCATC
TTACGCGGTATAGTGGGGGG

Downstream 100 bases:

>100_bases
CTACACTAAAGGTGTTAGGAAAGGAGGTGAAGGCCGTGCGCGCCCTGGCGTTGGCGCTCGCCCTGGTCCTTCCCGGCTGC
CTCCCCGTGGCCATGCTGCG

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 260

Protein sequence:

>261_residues
MGRFLRHALALAVLLAVLLPFLWMAYAAFMPKEAVYSGELFSRVGFSLENVRALAREGFWGRLLFSLGVSSGAVALELFT
ALFAAYALRAGLGLLPFYLVLMAIPAELLLVPLYGVLKDLSLLETFWALLLPFAASPFVIYLVYQGMRAVPEELLEAAKL
DGAGHRVLLFRILLPLVRPTLVAAGVLAFAAHWNLVLYPRVVVSDPGLWTLQTWLTDLQRKYPTDWGLLSAAALLSVLPI
ALLYLLFERRVVATFEEGLKG

Sequences:

>Translated_261_residues
MGRFLRHALALAVLLAVLLPFLWMAYAAFMPKEAVYSGELFSRVGFSLENVRALAREGFWGRLLFSLGVSSGAVALELFT
ALFAAYALRAGLGLLPFYLVLMAIPAELLLVPLYGVLKDLSLLETFWALLLPFAASPFVIYLVYQGMRAVPEELLEAAKL
DGAGHRVLLFRILLPLVRPTLVAAGVLAFAAHWNLVLYPRVVVSDPGLWTLQTWLTDLQRKYPTDWGLLSAAALLSVLPI
ALLYLLFERRVVATFEEGLKG
>Mature_260_residues
GRFLRHALALAVLLAVLLPFLWMAYAAFMPKEAVYSGELFSRVGFSLENVRALAREGFWGRLLFSLGVSSGAVALELFTA
LFAAYALRAGLGLLPFYLVLMAIPAELLLVPLYGVLKDLSLLETFWALLLPFAASPFVIYLVYQGMRAVPEELLEAAKLD
GAGHRVLLFRILLPLVRPTLVAAGVLAFAAHWNLVLYPRVVVSDPGLWTLQTWLTDLQRKYPTDWGLLSAAALLSVLPIA
LLYLLFERRVVATFEEGLKG

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789860, Length=262, Percent_Identity=27.4809160305344, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1787571, Length=168, Percent_Identity=30.3571428571429, Blast_Score=77, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 28820; Mature: 28689

Theoretical pI: Translated: 9.19; Mature: 9.19

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRFLRHALALAVLLAVLLPFLWMAYAAFMPKEAVYSGELFSRVGFSLENVRALAREGFW
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHCCHH
GRLLFSLGVSSGAVALELFTALFAAYALRAGLGLLPFYLVLMAIPAELLLVPLYGVLKDL
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLLETFWALLLPFAASPFVIYLVYQGMRAVPEELLEAAKLDGAGHRVLLFRILLPLVRPT
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
LVAAGVLAFAAHWNLVLYPRVVVSDPGLWTLQTWLTDLQRKYPTDWGLLSAAALLSVLPI
HHHHHHHHHHHHCCCEEECCCEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
ALLYLLFERRVVATFEEGLKG
HHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GRFLRHALALAVLLAVLLPFLWMAYAAFMPKEAVYSGELFSRVGFSLENVRALAREGFW
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHCCHH
GRLLFSLGVSSGAVALELFTALFAAYALRAGLGLLPFYLVLMAIPAELLLVPLYGVLKDL
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLLETFWALLLPFAASPFVIYLVYQGMRAVPEELLEAAKLDGAGHRVLLFRILLPLVRPT
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
LVAAGVLAFAAHWNLVLYPRVVVSDPGLWTLQTWLTDLQRKYPTDWGLLSAAALLSVLPI
HHHHHHHHHHHHCCCEEECCCEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
ALLYLLFERRVVATFEEGLKG
HHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]