| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
Click here to switch to the map view.
The map label for this gene is thrS [H]
Identifier: 55981844
GI number: 55981844
Start: 1760105
End: 1762084
Strand: Direct
Name: thrS [H]
Synonym: TTHA1875
Alternate gene names: 55981844
Gene position: 1760105-1762084 (Clockwise)
Preceding gene: 55981836
Following gene: 55981845
Centisome position: 95.15
GC content: 67.47
Gene sequence:
>1980_bases ATGACGGTCTACCTGCCGGACGGCAAGCCCCTGGAGCTTCCCGAGGGGGCCACGGCGAAGGACGTGGCCCGGGCCCTCGG GGAGGGCTGGGAGAGGCGGGCGGTGGGGGCCATCGTGGACGGGGAGCTCTACGACCTCCTAAAGCCCCTTCCCCAGGGGG CGAAGGTGCGCCTCCTCACGGAGAAGGACCCCGAGTTCCAGACCCTCTTCCGCCACACCCTGGCCCACGTCCTGGCCCAG GCGGTGAAGGAGTTCTTCCGGGAGAAGGGCTACGATCCGGAAAGCGTGAGGCTCGGGGTGGGGCCCGTGATTGAGAAGGG CTTCTACTACGACATAGAAGCCCCCGAGCCCCTCTCCGACGAGGACCTGCCCGCCATAGAGGCGAAGATGCGGGAGATCC TCAAGCGGGACCTCCCCCTAAGGCGCTTCGTCCTCTCCCGGGAGGAGGCCTTAGCCCGCTACCGGGGAAAGGACCCCTAC AAGACGGAGCTCGTCCTGGAGATCCCCGAGGGGGAGGAGATCAGCTTCTACCAGCAGGGGGACGAGGCCTACGGCTTCAC CGACCTCTGCCGCGGCCCCCACGTCCCCTCCACGGGCCGCATCCCCCCCCACTTCAAGCTCACCCACGTGGCGGGGGCCT ACTGGCGGGGGGACGAAAACAGGCCCATGCTGCAGCGGGTCTACGGGGTGGCCTTCCGCACCGCCGAGGAACTTAAAGAA TACCTCTGGCAGCTGGAGGAGGCCAAGAAACGGGACCACCGGCGGCTTGGGCGGGAGCTGGAGCTCTTCCTCATAGACCC CCTGGTGGGGAAGGGGCTCGTGCTCTGGCTTCCCAAGGGGAACGTGGTCCGGGAGGAGCTCATGGCCTTCATGCGGGAGG AGCAGGTGAGGCGGGGCTACCAGCTCGTGACCACGCCCCACATCGGGAGCCTGGAGCTCTACAAGACCAGCGGCCACTAC CCCTACTACGCGGAAAGCCAGTTCCCCCCCATCAGCTTCAAGGAGCGGGGCGAGGAGGAGGAGTACCTCCTCAAGCCCAT GAACTGCCCCCACCACATCAGGATCTACGCCTATAGGAAGCGCTCCTACCGGGAGCTTCCCCTAAGGCTTGCCGAGTTCG GCACCGTCTACCGCTACGAGAAGGCGGGGGAGCTTCTTGGCCTCACAAGGGTTAGGGGCTTCACCCAGGACGACGCCCAC ATCTTCTGCACCCCCGAGGAGGTGAAGGGGGAGTTCCTCGGGGTCTTGGACCTGGTGCTTAAGGTCTTCGCCACCTTGGG GCTTAAGGACTACCGGGCCCGGATCGGGGTGCGGGACCCGAAAAGCGACAAGTACGTGGGGGACGAGGCCAAGTGGGCCC TGGCGGAAAGGCAGATTGAGGAGGCGGCGGCCGAGGCCGGGCTCCGGTACACGGTGGAGGAGGGGGACGCCGCCTTCTAC GGCCCCAAGCTGGACTTCGTGGTGAAGGACGCCCTGGGGCGGGAGTGGCAGCTCGGCACCATCCAGGTGGACTACAACCT GCCCGAGCGCTTCGGGCTGACCTACGTGGGCAAAGACGGGGAGGAGCACCGCCCCGTGATGCTCCACCGGGCCCCCTTCG GCTCCCTGGAGCGCTTCATCGGCATCCTCATTGAGCACTTCGCCGGGGACTTCCCCCTGTGGCTCGCCCCGGTGCAGGCG GTGGTGGTCCCCGTGTCCGAGAAGCAGGAGGACTACGCCCGGGAGGTGGCGGGTAGGCTCAAGGAGGCGGGCCTACGGGC CGAGGCCGACACCCGGCCCGAGAGGATGCAGGCCCGGATCCGGGACGCCGAGGTGCAGAAGGTGCCCTACATCCTCGTGG TGGGGGAGCGGGAGAAGGCCGAAGGAGCGGTGAGCGTGCGCCGCCGGAAGAAGGGCAACCTGGGGACGATGCCCCTCGCC GCCTTCCTGGAGGGGGCCCTCAGGGAGTACCGGGAAAGGCGGCTTGAGCCGGTCTTTTAG
Upstream 100 bases:
>100_bases TGCCCCGGCCCCGTCAGGCCAGGGTCAGGGGGAGCACGGGAGGCCTGAGCGGGGCCCGAAGCGAGGGCGAAGCCGGGTAA ATGCCCGTATAGTAGAGGGC
Downstream 100 bases:
>100_bases GGCATGCGGGCCAGGTCCACCATCTTCACCCTGTTCGTGGAGTACGTCTACCCGGAACGGGCGGCCCGGGTGCGGGACCT CGTGGCCATGATGGCCGCCC
Product: threonyl-tRNA synthetase
Products: NA
Alternate protein names: Threonine--tRNA ligase; ThrRS [H]
Number of amino acids: Translated: 659; Mature: 658
Protein sequence:
>659_residues MTVYLPDGKPLELPEGATAKDVARALGEGWERRAVGAIVDGELYDLLKPLPQGAKVRLLTEKDPEFQTLFRHTLAHVLAQ AVKEFFREKGYDPESVRLGVGPVIEKGFYYDIEAPEPLSDEDLPAIEAKMREILKRDLPLRRFVLSREEALARYRGKDPY KTELVLEIPEGEEISFYQQGDEAYGFTDLCRGPHVPSTGRIPPHFKLTHVAGAYWRGDENRPMLQRVYGVAFRTAEELKE YLWQLEEAKKRDHRRLGRELELFLIDPLVGKGLVLWLPKGNVVREELMAFMREEQVRRGYQLVTTPHIGSLELYKTSGHY PYYAESQFPPISFKERGEEEEYLLKPMNCPHHIRIYAYRKRSYRELPLRLAEFGTVYRYEKAGELLGLTRVRGFTQDDAH IFCTPEEVKGEFLGVLDLVLKVFATLGLKDYRARIGVRDPKSDKYVGDEAKWALAERQIEEAAAEAGLRYTVEEGDAAFY GPKLDFVVKDALGREWQLGTIQVDYNLPERFGLTYVGKDGEEHRPVMLHRAPFGSLERFIGILIEHFAGDFPLWLAPVQA VVVPVSEKQEDYAREVAGRLKEAGLRAEADTRPERMQARIRDAEVQKVPYILVVGEREKAEGAVSVRRRKKGNLGTMPLA AFLEGALREYRERRLEPVF
Sequences:
>Translated_659_residues MTVYLPDGKPLELPEGATAKDVARALGEGWERRAVGAIVDGELYDLLKPLPQGAKVRLLTEKDPEFQTLFRHTLAHVLAQ AVKEFFREKGYDPESVRLGVGPVIEKGFYYDIEAPEPLSDEDLPAIEAKMREILKRDLPLRRFVLSREEALARYRGKDPY KTELVLEIPEGEEISFYQQGDEAYGFTDLCRGPHVPSTGRIPPHFKLTHVAGAYWRGDENRPMLQRVYGVAFRTAEELKE YLWQLEEAKKRDHRRLGRELELFLIDPLVGKGLVLWLPKGNVVREELMAFMREEQVRRGYQLVTTPHIGSLELYKTSGHY PYYAESQFPPISFKERGEEEEYLLKPMNCPHHIRIYAYRKRSYRELPLRLAEFGTVYRYEKAGELLGLTRVRGFTQDDAH IFCTPEEVKGEFLGVLDLVLKVFATLGLKDYRARIGVRDPKSDKYVGDEAKWALAERQIEEAAAEAGLRYTVEEGDAAFY GPKLDFVVKDALGREWQLGTIQVDYNLPERFGLTYVGKDGEEHRPVMLHRAPFGSLERFIGILIEHFAGDFPLWLAPVQA VVVPVSEKQEDYAREVAGRLKEAGLRAEADTRPERMQARIRDAEVQKVPYILVVGEREKAEGAVSVRRRKKGNLGTMPLA AFLEGALREYRERRLEPVF >Mature_658_residues TVYLPDGKPLELPEGATAKDVARALGEGWERRAVGAIVDGELYDLLKPLPQGAKVRLLTEKDPEFQTLFRHTLAHVLAQA VKEFFREKGYDPESVRLGVGPVIEKGFYYDIEAPEPLSDEDLPAIEAKMREILKRDLPLRRFVLSREEALARYRGKDPYK TELVLEIPEGEEISFYQQGDEAYGFTDLCRGPHVPSTGRIPPHFKLTHVAGAYWRGDENRPMLQRVYGVAFRTAEELKEY LWQLEEAKKRDHRRLGRELELFLIDPLVGKGLVLWLPKGNVVREELMAFMREEQVRRGYQLVTTPHIGSLELYKTSGHYP YYAESQFPPISFKERGEEEEYLLKPMNCPHHIRIYAYRKRSYRELPLRLAEFGTVYRYEKAGELLGLTRVRGFTQDDAHI FCTPEEVKGEFLGVLDLVLKVFATLGLKDYRARIGVRDPKSDKYVGDEAKWALAERQIEEAAAEAGLRYTVEEGDAAFYG PKLDFVVKDALGREWQLGTIQVDYNLPERFGLTYVGKDGEEHRPVMLHRAPFGSLERFIGILIEHFAGDFPLWLAPVQAV VVPVSEKQEDYAREVAGRLKEAGLRAEADTRPERMQARIRDAEVQKVPYILVVGEREKAEGAVSVRRRKKGNLGTMPLAA FLEGALREYRERRLEPVF
Specific function: Thrs Is Also A Translational Repressor Protein, It Controls The Translation Of Its Own Gene By Binding To Its mRNA. [C]
COG id: COG0441
COG function: function code J; Threonyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family [H]
Homologues:
Organism=Homo sapiens, GI38202255, Length=665, Percent_Identity=38.3458646616541, Blast_Score=452, Evalue=1e-127, Organism=Homo sapiens, GI38570111, Length=665, Percent_Identity=36.5413533834586, Blast_Score=429, Evalue=1e-120, Organism=Homo sapiens, GI20070344, Length=655, Percent_Identity=37.7099236641221, Blast_Score=407, Evalue=1e-113, Organism=Escherichia coli, GI1788013, Length=659, Percent_Identity=38.9984825493171, Blast_Score=502, Evalue=1e-143, Organism=Caenorhabditis elegans, GI71984184, Length=645, Percent_Identity=35.6589147286822, Blast_Score=420, Evalue=1e-117, Organism=Caenorhabditis elegans, GI71984192, Length=645, Percent_Identity=35.6589147286822, Blast_Score=419, Evalue=1e-117, Organism=Saccharomyces cerevisiae, GI6322112, Length=649, Percent_Identity=37.1340523882897, Blast_Score=431, Evalue=1e-121, Organism=Saccharomyces cerevisiae, GI6322654, Length=396, Percent_Identity=37.3737373737374, Blast_Score=271, Evalue=2e-73, Organism=Drosophila melanogaster, GI24583842, Length=646, Percent_Identity=39.3188854489164, Blast_Score=469, Evalue=1e-132, Organism=Drosophila melanogaster, GI28574141, Length=646, Percent_Identity=39.3188854489164, Blast_Score=469, Evalue=1e-132, Organism=Drosophila melanogaster, GI24583839, Length=646, Percent_Identity=39.3188854489164, Blast_Score=468, Evalue=1e-132,
Paralogues:
None
Copy number: 700 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002314 - InterPro: IPR006195 - InterPro: IPR004154 - InterPro: IPR012675 - InterPro: IPR004095 - InterPro: IPR012676 - InterPro: IPR002320 - InterPro: IPR018163 - InterPro: IPR012947 [H]
Pfam domain/function: PF03129 HGTP_anticodon; PF02824 TGS; PF00587 tRNA-synt_2b; PF07973 tRNA_SAD [H]
EC number: =6.1.1.3 [H]
Molecular weight: Translated: 75538; Mature: 75407
Theoretical pI: Translated: 6.32; Mature: 6.32
Prosite motif: PS50862 AA_TRNA_LIGASE_II
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVYLPDGKPLELPEGATAKDVARALGEGWERRAVGAIVDGELYDLLKPLPQGAKVRLLT CEEECCCCCCCCCCCCCCHHHHHHHHHCCHHHHHCCEEECCHHHHHHHCCCCCCEEEEEE EKDPEFQTLFRHTLAHVLAQAVKEFFREKGYDPESVRLGVGPVIEKGFYYDIEAPEPLSD CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHCCEEEECCCCCCCCC EDLPAIEAKMREILKRDLPLRRFVLSREEALARYRGKDPYKTELVLEIPEGEEISFYQQG CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEECC DEAYGFTDLCRGPHVPSTGRIPPHFKLTHVAGAYWRGDENRPMLQRVYGVAFRTAEELKE CCCCCHHHHHCCCCCCCCCCCCCCEEEEECCCEEEECCCCCHHHHHHHHHHHHHHHHHHH YLWQLEEAKKRDHRRLGRELELFLIDPLVGKGLVLWLPKGNVVREELMAFMREEQVRRGY HHHHHHHHHHHHHHHHCCEEEEEEECCHHCCCEEEEECCCCHHHHHHHHHHHHHHHHCCE QLVTTPHIGSLELYKTSGHYPYYAESQFPPISFKERGEEEEYLLKPMNCPHHIRIYAYRK EEEECCCCCCEEEEEECCCCCEECCCCCCCCCHHHCCCCHHHHCCCCCCCCEEEEEEEEC RSYRELPLRLAEFGTVYRYEKAGELLGLTRVRGFTQDDAHIFCTPEEVKGEFLGVLDLVL CCHHHHHHHHHHHCHHHEEHHCCHHHHHHHHCCCCCCCCEEEECHHHHHHHHHHHHHHHH KVFATLGLKDYRARIGVRDPKSDKYVGDEAKWALAERQIEEAAAEAGLRYTVEEGDAAFY HHHHHHCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEE GPKLDFVVKDALGREWQLGTIQVDYNLPERFGLTYVGKDGEEHRPVMLHRAPFGSLERFI CCCHHHHHHHHCCCCEEEEEEEECCCCCHHHCCEEECCCCCCCCCEEEEECCCHHHHHHH GILIEHFAGDFPLWLAPVQAVVVPVSEKQEDYAREVAGRLKEAGLRAEADTRPERMQARI HHHHHHHCCCCCHHHHCHHHEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH RDAEVQKVPYILVVGEREKAEGAVSVRRRKKGNLGTMPLAAFLEGALREYRERRLEPVF HHHHHHHCCEEEEECCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure TVYLPDGKPLELPEGATAKDVARALGEGWERRAVGAIVDGELYDLLKPLPQGAKVRLLT EEECCCCCCCCCCCCCCHHHHHHHHHCCHHHHHCCEEECCHHHHHHHCCCCCCEEEEEE EKDPEFQTLFRHTLAHVLAQAVKEFFREKGYDPESVRLGVGPVIEKGFYYDIEAPEPLSD CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHCCEEEECCCCCCCCC EDLPAIEAKMREILKRDLPLRRFVLSREEALARYRGKDPYKTELVLEIPEGEEISFYQQG CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEECC DEAYGFTDLCRGPHVPSTGRIPPHFKLTHVAGAYWRGDENRPMLQRVYGVAFRTAEELKE CCCCCHHHHHCCCCCCCCCCCCCCEEEEECCCEEEECCCCCHHHHHHHHHHHHHHHHHHH YLWQLEEAKKRDHRRLGRELELFLIDPLVGKGLVLWLPKGNVVREELMAFMREEQVRRGY HHHHHHHHHHHHHHHHCCEEEEEEECCHHCCCEEEEECCCCHHHHHHHHHHHHHHHHCCE QLVTTPHIGSLELYKTSGHYPYYAESQFPPISFKERGEEEEYLLKPMNCPHHIRIYAYRK EEEECCCCCCEEEEEECCCCCEECCCCCCCCCHHHCCCCHHHHCCCCCCCCEEEEEEEEC RSYRELPLRLAEFGTVYRYEKAGELLGLTRVRGFTQDDAHIFCTPEEVKGEFLGVLDLVL CCHHHHHHHHHHHCHHHEEHHCCHHHHHHHHCCCCCCCCEEEECHHHHHHHHHHHHHHHH KVFATLGLKDYRARIGVRDPKSDKYVGDEAKWALAERQIEEAAAEAGLRYTVEEGDAAFY HHHHHHCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEE GPKLDFVVKDALGREWQLGTIQVDYNLPERFGLTYVGKDGEEHRPVMLHRAPFGSLERFI CCCHHHHHHHHCCCCEEEEEEEECCCCCHHHCCEEECCCCCCCCCEEEEECCCHHHHHHH GILIEHFAGDFPLWLAPVQAVVVPVSEKQEDYAREVAGRLKEAGLRAEADTRPERMQARI HHHHHHHCCCCCHHHHCHHHEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH RDAEVQKVPYILVVGEREKAEGAVSVRRRKKGNLGTMPLAAFLEGALREYRERRLEPVF HHHHHHHCCEEEEECCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA