| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is 55981838
Identifier: 55981838
GI number: 55981838
Start: 1753889
End: 1754254
Strand: Reverse
Name: 55981838
Synonym: TTHA1869
Alternate gene names: NA
Gene position: 1754254-1753889 (Counterclockwise)
Preceding gene: 55981839
Following gene: 55981837
Centisome position: 94.84
GC content: 60.66
Gene sequence:
>366_bases GTGCGGGGGAGCTGGGTCATCGCCCTCTACTACGATCCTTCACAGGATGCCTTTGACCAAGAAAGGAGCAAGGGCGTTCA GATCGGCCAAGATGGCCGACAGGCTCCCTTCAGCGTTTCTGGCCTGGCGGCGGGGCAGTACGTCCTCGTGGGGTTTAAGG ACATGGACAGGGATGGGCAGGTGAGCCCTCCGGACTACCTGGGCATCTACACGGATTCCCAGGGCAACGTCCTCATCACC CCCGGCCAGAGCGGGCTGTCCTTGGTGATGGAGCTAGTGAGCGCTTATGGCTACGGTTACCAGAATACCCTGGTGGGTCT TCCTTCTTGGGCTGTGGACGTTCTCCGGGTGCTAGCAGGAAGGTAG
Upstream 100 bases:
>100_bases GCCCCCTGGAGGTGGAGGGGGTGGGACGCCCCCACCGCCTTCGGGGGGCGGCGGCTTTGCCGGGACCCTCTACCTGGGCC AGACCATCTCCCAGGGCACG
Downstream 100 bases:
>100_bases CGCCCCACCCCCCCCTGGGGGGGGTGGGGGCACCTCCCCGGACTTCACCCTGGCCCTAGAGCCCTCCCAGGTGGCTCTCC AGGCGGGGGGGAGCGCTTCC
Product: hypothetical protein
Products: NA
Alternate protein names: Extracellular Serine Protease
Number of amino acids: Translated: 121; Mature: 121
Protein sequence:
>121_residues MRGSWVIALYYDPSQDAFDQERSKGVQIGQDGRQAPFSVSGLAAGQYVLVGFKDMDRDGQVSPPDYLGIYTDSQGNVLIT PGQSGLSLVMELVSAYGYGYQNTLVGLPSWAVDVLRVLAGR
Sequences:
>Translated_121_residues MRGSWVIALYYDPSQDAFDQERSKGVQIGQDGRQAPFSVSGLAAGQYVLVGFKDMDRDGQVSPPDYLGIYTDSQGNVLIT PGQSGLSLVMELVSAYGYGYQNTLVGLPSWAVDVLRVLAGR >Mature_121_residues MRGSWVIALYYDPSQDAFDQERSKGVQIGQDGRQAPFSVSGLAAGQYVLVGFKDMDRDGQVSPPDYLGIYTDSQGNVLIT PGQSGLSLVMELVSAYGYGYQNTLVGLPSWAVDVLRVLAGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13068; Mature: 13068
Theoretical pI: Translated: 4.27; Mature: 4.27
Prosite motif: PS00018 EF_HAND_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGSWVIALYYDPSQDAFDQERSKGVQIGQDGRQAPFSVSGLAAGQYVLVGFKDMDRDGQ CCCCEEEEEEECCCCCHHHHHHHCCCEECCCCCCCCCEECCCCCCCEEEEEEEECCCCCC VSPPDYLGIYTDSQGNVLITPGQSGLSLVMELVSAYGYGYQNTLVGLPSWAVDVLRVLAG CCCCCEEEEEECCCCCEEEECCCHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHC R C >Mature Secondary Structure MRGSWVIALYYDPSQDAFDQERSKGVQIGQDGRQAPFSVSGLAAGQYVLVGFKDMDRDGQ CCCCEEEEEEECCCCCHHHHHHHCCCEECCCCCCCCCEECCCCCCCEEEEEEEECCCCCC VSPPDYLGIYTDSQGNVLITPGQSGLSLVMELVSAYGYGYQNTLVGLPSWAVDVLRVLAG CCCCCEEEEEECCCCCEEEECCCHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHC R C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA