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The map label for this gene is yjbG [H]

Identifier: 55981821

GI number: 55981821

Start: 1736520

End: 1738211

Strand: Direct

Name: yjbG [H]

Synonym: TTHA1852

Alternate gene names: 55981821

Gene position: 1736520-1738211 (Clockwise)

Preceding gene: 55981820

Following gene: 55981822

Centisome position: 93.88

GC content: 68.32

Gene sequence:

>1692_bases
ATGGAAACCACCTGGGACCTCACCCCCCTCTTCCCCGGCCTGGAAAGCCCCGAGTTCCAGAGGGCCTGGGAGGGCCTGAA
GGGGAGGATCGGCGAGCTCAAGGGGCTTCTTGAGCGGGAGGCCCCCCTCCCCGAGGTCCTCGCCGCTCTGGACGCCTTCC
TGGAGGAGGCCACCCCCCTCCGGGCCTACCTCTACGCCCGCTACAGCGCCGACACCCGGGACGAGGCCGCCCTCGCCAAG
CTCTCCGAGCTGGAGATCCTCTTCCTGGACTTCCAGCGCCTAAGGCCCCGCCTCACCCGCTACCTGGCCCTGAAGGACCC
CGAGGAAGCCGGGCCCCACCGCCTCCTGGTGGAGGAGGCCAAGGAGGAGGCCCTGCACATGATGCCCGAGGGGGAGGAGG
TCCTGGCGGCGGAGCTTTCCCTCTCGGGGAGGGCGGCTTGGGACAAGCTCCACGAGAGCCTCACCAGCCAGATCACCGCG
GTGGTGGACGGGGAGGAGATGCCCATCACCAAGGTGCGGAACCTCTACTTCCACCCCGAGGAAGAGGTGCGGAAGAAGGC
CTACGAGGCCGAGCTCAAGGCCTGGGAGGCCCACGAGGTGCCTCTGGCCTTCGCCCTAAACGGGGTGAAGGGAGAGGCCT
CGGTCCTCAACCGGAGGCGGGGCTATAGGGACGACCTCGAGCCCACCCTCCACGAAAACCGCATCACCAGGAAGGCCCTA
AAGGCCATGCAGGAGGCGGTAGGGGAGAGCCTTCCCCTCTTCCGCCGCTACTTCCTCCTCAAGGCCAGGGCCCTCGGCAA
GGAGCGCCTGGACTGGTGGGACCTCTTCGCCCCCCTGGGCCGGGGAAGGCGCTGGAGCCTGGAGGAGGCCCGGGCCTTCA
TCCCGGCCAAGCTCGCCGCCTTGGTGCCGAACGCCGCCAAGGTGGCGGAGATGGCCTTCCACGAGCGCTGGATGGACCTC
CTCCCCCGAAAGGGCAAGGTGGGCGGGGCCTACTGCATGGCCCGGGGCGGGGGGAAGAGCCTCATCCTCGCCAACTACGA
GGAGAGCTTTGAGTCCGTCTCCACCCTGGCCCACGAGCTGGGCCACGCCTACCACAACTTCGCCCTCAAGGAGGCCCCGG
CCTCCCTCCGCCGGGTCCCCATGACCCTGGCGGAGACGGCGAGCATCATGAACGAGACCCTGGTGGTGGAGGCGGCCCTC
AAGGAGGCCTCCCCCGAGGAGGGCCTCCTCATCCTGGACGCCTACCTCCAGGGGGCGGCCCAGGTGGTGGTGGACATCCA
TAGCCGCTTCCTCTTTGAGTCCTGGGTCTTCCAAAGGCGCAAGGCGCGGGAGCTTTCCCCAAGGGAGTTCAAGGAGCTCA
TGCTCAAGGCCCAGGAGGAGGCCTACGGGGAGGCCCTCGCCACCCGCCACCCCTACATGTGGGCGGTGAAGGGGCACTAC
TACGGGGCCGACTTCTACAACTACCCCTACACCTTCGGCCTCCTCTTCGGGCTTGCCGTCTACCAGGAGGCCAAGGAGGA
CCCCGGCTTCGCCGGGCGCTACGAGGCCCTCCTCGCCGAGTCCGGCCGCTACCGGGCCAAGGAGCTCGCCCTCCGCTTCG
GCTTTGACCTGGAAAGCGTGGACTTCTGGCGCCGGGGGATAAGGGTCCTCGAGGAGAAGGTGGCCCAGCTTGAGCGCATG
ATCTCCCCCTGA

Upstream 100 bases:

>100_bases
CCCCCGGAGGGCGCGGGCTTCCTCGCCCTCGTCCTCCTAAGGCTCCGCGTCTACCTGGAACCCCCCGGCTTCTGACCGGC
GGGTCAGGTATAGTGGGGCC

Downstream 100 bases:

>100_bases
CCGAGGGGGGCTAGGCTTTGGAGGATGCGGGTCCTCGTCCTCTGCACCCACAACTCCGCCCGGAGCCAGATGGCGGAGGC
CTGGCTCAAGCACTTCGCCC

Product: oligoendopeptidase F

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 563; Mature: 563

Protein sequence:

>563_residues
METTWDLTPLFPGLESPEFQRAWEGLKGRIGELKGLLEREAPLPEVLAALDAFLEEATPLRAYLYARYSADTRDEAALAK
LSELEILFLDFQRLRPRLTRYLALKDPEEAGPHRLLVEEAKEEALHMMPEGEEVLAAELSLSGRAAWDKLHESLTSQITA
VVDGEEMPITKVRNLYFHPEEEVRKKAYEAELKAWEAHEVPLAFALNGVKGEASVLNRRRGYRDDLEPTLHENRITRKAL
KAMQEAVGESLPLFRRYFLLKARALGKERLDWWDLFAPLGRGRRWSLEEARAFIPAKLAALVPNAAKVAEMAFHERWMDL
LPRKGKVGGAYCMARGGGKSLILANYEESFESVSTLAHELGHAYHNFALKEAPASLRRVPMTLAETASIMNETLVVEAAL
KEASPEEGLLILDAYLQGAAQVVVDIHSRFLFESWVFQRRKARELSPREFKELMLKAQEEAYGEALATRHPYMWAVKGHY
YGADFYNYPYTFGLLFGLAVYQEAKEDPGFAGRYEALLAESGRYRAKELALRFGFDLESVDFWRRGIRVLEEKVAQLERM
ISP

Sequences:

>Translated_563_residues
METTWDLTPLFPGLESPEFQRAWEGLKGRIGELKGLLEREAPLPEVLAALDAFLEEATPLRAYLYARYSADTRDEAALAK
LSELEILFLDFQRLRPRLTRYLALKDPEEAGPHRLLVEEAKEEALHMMPEGEEVLAAELSLSGRAAWDKLHESLTSQITA
VVDGEEMPITKVRNLYFHPEEEVRKKAYEAELKAWEAHEVPLAFALNGVKGEASVLNRRRGYRDDLEPTLHENRITRKAL
KAMQEAVGESLPLFRRYFLLKARALGKERLDWWDLFAPLGRGRRWSLEEARAFIPAKLAALVPNAAKVAEMAFHERWMDL
LPRKGKVGGAYCMARGGGKSLILANYEESFESVSTLAHELGHAYHNFALKEAPASLRRVPMTLAETASIMNETLVVEAAL
KEASPEEGLLILDAYLQGAAQVVVDIHSRFLFESWVFQRRKARELSPREFKELMLKAQEEAYGEALATRHPYMWAVKGHY
YGADFYNYPYTFGLLFGLAVYQEAKEDPGFAGRYEALLAESGRYRAKELALRFGFDLESVDFWRRGIRVLEEKVAQLERM
ISP
>Mature_563_residues
METTWDLTPLFPGLESPEFQRAWEGLKGRIGELKGLLEREAPLPEVLAALDAFLEEATPLRAYLYARYSADTRDEAALAK
LSELEILFLDFQRLRPRLTRYLALKDPEEAGPHRLLVEEAKEEALHMMPEGEEVLAAELSLSGRAAWDKLHESLTSQITA
VVDGEEMPITKVRNLYFHPEEEVRKKAYEAELKAWEAHEVPLAFALNGVKGEASVLNRRRGYRDDLEPTLHENRITRKAL
KAMQEAVGESLPLFRRYFLLKARALGKERLDWWDLFAPLGRGRRWSLEEARAFIPAKLAALVPNAAKVAEMAFHERWMDL
LPRKGKVGGAYCMARGGGKSLILANYEESFESVSTLAHELGHAYHNFALKEAPASLRRVPMTLAETASIMNETLVVEAAL
KEASPEEGLLILDAYLQGAAQVVVDIHSRFLFESWVFQRRKARELSPREFKELMLKAQEEAYGEALATRHPYMWAVKGHY
YGADFYNYPYTFGLLFGLAVYQEAKEDPGFAGRYEALLAESGRYRAKELALRFGFDLESVDFWRRGIRVLEEKVAQLERM
ISP

Specific function: Unknown

COG id: COG1164

COG function: function code E; Oligoendopeptidase F

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M3B family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001567
- InterPro:   IPR004438
- InterPro:   IPR013647 [H]

Pfam domain/function: PF01432 Peptidase_M3; PF08439 Peptidase_M3_N [H]

EC number: NA

Molecular weight: Translated: 64093; Mature: 64093

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METTWDLTPLFPGLESPEFQRAWEGLKGRIGELKGLLEREAPLPEVLAALDAFLEEATPL
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCH
RAYLYARYSADTRDEAALAKLSELEILFLDFQRLRPRLTRYLALKDPEEAGPHRLLVEEA
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCHHHHHHH
KEEALHMMPEGEEVLAAELSLSGRAAWDKLHESLTSQITAVVDGEEMPITKVRNLYFHPE
HHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHCCCCH
EEVRKKAYEAELKAWEAHEVPLAFALNGVKGEASVLNRRRGYRDDLEPTLHENRITRKAL
HHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
KAMQEAVGESLPLFRRYFLLKARALGKERLDWWDLFAPLGRGRRWSLEEARAFIPAKLAA
HHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
LVPNAAKVAEMAFHERWMDLLPRKGKVGGAYCMARGGGKSLILANYEESFESVSTLAHEL
HCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCEEEEECHHHHHHHHHHHHHHH
GHAYHNFALKEAPASLRRVPMTLAETASIMNETLVVEAALKEASPEEGLLILDAYLQGAA
HHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHH
QVVVDIHSRFLFESWVFQRRKARELSPREFKELMLKAQEEAYGEALATRHPYMWAVKGHY
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCE
YGADFYNYPYTFGLLFGLAVYQEAKEDPGFAGRYEALLAESGRYRAKELALRFGFDLESV
ECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCHHH
DFWRRGIRVLEEKVAQLERMISP
HHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
METTWDLTPLFPGLESPEFQRAWEGLKGRIGELKGLLEREAPLPEVLAALDAFLEEATPL
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCH
RAYLYARYSADTRDEAALAKLSELEILFLDFQRLRPRLTRYLALKDPEEAGPHRLLVEEA
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCHHHHHHH
KEEALHMMPEGEEVLAAELSLSGRAAWDKLHESLTSQITAVVDGEEMPITKVRNLYFHPE
HHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHCCCCH
EEVRKKAYEAELKAWEAHEVPLAFALNGVKGEASVLNRRRGYRDDLEPTLHENRITRKAL
HHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
KAMQEAVGESLPLFRRYFLLKARALGKERLDWWDLFAPLGRGRRWSLEEARAFIPAKLAA
HHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
LVPNAAKVAEMAFHERWMDLLPRKGKVGGAYCMARGGGKSLILANYEESFESVSTLAHEL
HCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCEEEEECHHHHHHHHHHHHHHH
GHAYHNFALKEAPASLRRVPMTLAETASIMNETLVVEAALKEASPEEGLLILDAYLQGAA
HHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHH
QVVVDIHSRFLFESWVFQRRKARELSPREFKELMLKAQEEAYGEALATRHPYMWAVKGHY
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCE
YGADFYNYPYTFGLLFGLAVYQEAKEDPGFAGRYEALLAESGRYRAKELALRFGFDLESV
ECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCHHH
DFWRRGIRVLEEKVAQLERMISP
HHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]